Gyan Bhanot

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Predicting recurrence in clear cell Renal Cell Carcinoma: Analysis of TCGA data using outlier analysis and generalized matrix LVQ

Gargi Mukherjee, Gyan Bhanot, Kevin Raines, 2016, 2016 IEEE Congress on Evolutionary Computation (CEC).

A fast algorithm for the Cyber 205 to simulate the 3D Ising model

Gyan Bhanot, Dennis W. Duke, Román Salvador, 1986 .

Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets

Gyan Bhanot, Michael Biehl, Sahand Hormoz, 2014, Bioinform..

Correspondence: FLO67: a Case Study in Scalable Programming

Gyan Bhanot, Skef Wholey, Clifford Lasser, 1992, Int. J. High Perform. Comput. Appl..

Blue Gene/L, a system-on-a-chip

George L.-T. Chiu, Manish Gupta, Philip Heidelberger, 2002, Proceedings. IEEE International Conference on Cluster Computing.

IBM Research Report An Overview of The BlueGene/L Supercomputer

Philip Heidelberger, Gyan Bhanot, John A. Gunnels, 2002 .

Inferring Common Origins from mtDNA

Ajay K. Royyuru, Gabriela Alexe, Gyan Bhanot, 2006, RECOMB.

An Overview of the BlueGene/L Supercomputer

David F. Heidel, George L.-T. Chiu, Philip Heidelberger, 2002, ACM/IEEE SC 2002 Conference (SC'02).

Parallel Acceleration Algorithm for Spin Models

Gyan Bhanot, S. L. Adler, 1992 .

Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge

Feng Luo, Gyan Bhanot, Michael Biehl, 2014, Bioinform..

A Predictor for Survival in Intermediate Grade Clear Cell Renal Cell Carcinoma

Gyan Bhanot, Shridar Ganesan, James D. Brooks, 2009, BIOCOMP.

Expectation–Maximization-Driven Geodesic Active Contour With Overlap Resolution (EMaGACOR): Application to Lymphocyte Segmentation on Breast Cancer Histopathology

Gyan Bhanot, Hussain Fatakdawala, Anant Madabhushi, 2010, IEEE Transactions on Biomedical Engineering.

How to Use Multiple CPUs on a Node with Little Effort

Gyan Bhanot, 1999 .

A robust meta‐classification strategy for cancer detection from MS data

Gabriela Alexe, Gyan Bhanot, Arnold J Levine, 2006, Proteomics.

A robust meta-classification strategy for cancer diagnosis from gene expression data

Ramakrishna Ramaswamy, Gabriela Alexe, Gyan Bhanot, 2005, 2005 IEEE Computational Systems Bioinformatics Conference (CSB'05).

Constructing Near-Perfect Phylogenies with multiple homoplasy events

Gabriela Alexe, Gyan Bhanot, Laxmi Parida, 2006, ISMB.

Biomedical data analysis in translational research : Integration of expert knowledge and interpretable models

Thomas Villmann, Gyan Bhanot, Michael Biehl, 2017, ESANN 2017.

Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma

Huiqing Liu, Gabriela Alexe, Gyan Bhanot, 2010, BMC Systems Biology.

The BlueGene/L supercomputer and quantum ChromoDynamics

Philip Heidelberger, Gyan Bhanot, Matthias A. Blumrich, 2006, SC.

The BlueGene/L supercomputer

Gyan Bhanot, Pavlos Vranas, Alan Gara, 2002 .

Early Experience with Scientific Applications on the Blue Gene/L Supercomputer

Philip Heidelberger, José E. Moreira, Gyan Bhanot, 2005, Euro-Par.

Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge

Gyan Bhanot, Michael Biehl, Sahand Hormoz, 2015, Bioinform..

Resolution of Some Paradoxes in B-Cell Binding and Activation: A Computer Study

Gyan Bhanot, 2004 .

Massively parallel quantum chromodynamics

Philip Heidelberger, Gyan Bhanot, Matthias A. Blumrich, 2008, IBM J. Res. Dev..

Mapping, modeling, and visual exploration of structure-function relationships in the heart

Bernice E. Rogowitz, Gyan Bhanot, Donna L. Gresh, 2001, IBM Syst. J..

Optimizing task layout on the Blue Gene/L supercomputer

Philip Heidelberger, Gyan Bhanot, Alan Gara, 2005, IBM J. Res. Dev..

From RNA Replicators to Genes to Survival Machines with Brains

Gyan Bhanot, G. Bhanot, 2013, BrainComp.

Cellular supercomputing with system-on-a-chip

Philip Heidelberger, Gyan Bhanot, Luis Ceze, 2002 .

BlueGene/L applications: Parallelism On a Massive Scale

Franz Franchetti, Martin Schulz, Bronis R. de Supinski, 2008, Int. J. High Perform. Comput. Appl..

Scaling physics and material science applications on a massively parallel Blue Gene/L system

Bronis R. de Supinski, José E. Moreira, Gyan Bhanot, 2005, ICS '05.

Algorithmic aspects of a neuron for coherent wave synapse realizations

Gyan Bhanot, Stephen L. Adler, John D. Weckel, 1996, IEEE Trans. Neural Networks.

Achieving High Performance on the BlueGene/L Supercomputer

José E. Moreira, Gyan Bhanot, Alessandro Curioni, 2006, Parallel Processing for Scientific Computing.

Integration of Expert Knowledge for Interpretable Models in Biomedical Data Analysis (Dagstuhl Seminar 16261)

Thomas Villmann, Gyan Bhanot, Michael Biehl, 2016, Dagstuhl Reports.

Computerized Image-Based Detection and Grading of Lymphocytic Infiltration in HER2+ Breast Cancer Histopathology

Gyan Bhanot, Anant Madabhushi, Ajay Basavanhally, 2010, IEEE Transactions on Biomedical Engineering.

The international journal of supercomputer applications—: Information for contributors

Gyan Bhanot, Skef Wholey, Clifford Lasser, 1992 .

ConsensusCluster: a software tool for unsupervised cluster discovery in numerical data.

Gyan Bhanot, Sandor Szalma, Michael Seiler, 2010, Omics : a journal of integrative biology.

Expectation Maximization driven Geodesic Active Contour with Overlap Resolution (EMaGACOR): Application to Lymphocyte Segmentation on Breast Cancer Histopathology

Gyan Bhanot, Hussain Fatakdawala, Anant Madabhushi, 2009, BIBE.

Hierarchical Decomposition: a Parallel Implementation of the Barnes-Hut Tree Algorithm

Gyan Bhanot, Vijay Sonnad, Robert Walkup, 1996, Int. J. High Speed Comput..

FLO67: a case study in scalable programming

Gyan Bhanot, Skef Wholey, C. Lasser, 1992 .

Some New Directions in Science on Computers

Gyan Bhanot, Shiyi Chen, Philip Seiden, 1997 .

Portraits of breast cancer progression

Jill P. Mesirov, Gabriela Alexe, Gyan Bhanot, 2007, BMC Bioinformatics.

Mixed models with Pthreads and MPI

Gyan Bhanot, Vijay Sonnad, Chary G. Tamirisa, 1999 .

Identifying a Clinically Applicable Mutational Burden Threshold as a Potential Biomarker of Response to Immune Checkpoint Therapy in Solid Tumors.

Gyan Bhanot, Shridar Ganesan, G. Bhanot, 2017, JCO precision oncology.

Robust diagnosis of non-Hodgkin lymphoma phenotypes validated on gene expression data from different laboratories.

Gabriela Alexe, Gyan Bhanot, Gustavo Stolovitzky, 2005, Genome informatics. International Conference on Genome Informatics.

Abstract 1996: Molecular stratification of clear cell renal cell carcinoma by consensus clustering reveals distinct subtypes and survival patterns

Gyan Bhanot, Shridar Ganesan, Michael Seiler, 2010 .

Molecular Stratification of Clear Cell Renal Cell Carcinoma by Consensus Clustering Reveals Distinct Subtypes and Survival Patterns.

Gyan Bhanot, Shridar Ganesan, Michael Seiler, 2010, Genes & cancer.

Neurite Sprouting and Synapse Deterioration in the Aging Caenorhabditis elegans Nervous System

Gyan Bhanot, Monica Driscoll, Aatish Bhatia, 2012, The Journal of Neuroscience.

Robust multi-tissue gene panel for cancer detection

Gyan Bhanot, Yi Zhang, Sándor Szalma, 2010, BMC Cancer.

Solving the Ising model exactly on a 5×5×4 lattice using the Connection machine

Gyan Bhanot, Srikanth Sastry, G. Bhanot, 1990 .

Quantum Chromodynamics on the BlueGene/L Supercomputer

Gyan Bhanot, Pavlos Vranas, 2009 .

Single Cell Profiling of Circulating Tumor Cells: Transcriptional Heterogeneity and Diversity from Breast Cancer Cell Lines

Gyan Bhanot, R. Fabian Pease, Ranjana H. Advani, 2012, PloS one.

High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates.

Gabriela Alexe, Gyan Bhanot, Charles DeLisi, 2007, Cancer research.

Dynamical analysis of a degenerate primary and secondary humoral immune response

Gyan Bhanot, Yoram Louzoun, G. Bhanot, 2003, Bulletin of mathematical biology.

Erratum: Regularization dependence of the lattice Higgs-Boson mass bound (Physical Review Letters (1988) 61, 25 (2900))

Gyan Bhanot, Khalil M. Bitar, 1988 .

PHYSICS GOALS OF THE QCD TERAFLOP PROJECT

Gyan Bhanot, Claudio Rebbi, Pietro Rossi, 1991 .

MICRORNA EXPRESSION PROFILE IN CLEAR-CELL KIDNEY CANCER

Gabriela Alexe, Gyan Bhanot, Anant Madabhushi, 2008 .

On solving four-dimensional SU (2) gauge theory by numerically finding its partition function

Gyan Bhanot, Román Salvador, Khalil M. Bitar, 1987 .

Amplified Loci on Chromosomes 8 and 17 Predict Early Relapse in ER-Positive Breast Cancers

Gyan Bhanot, Erhan Bilal, Shridar Ganesan, 2012, PloS one.

Microcanonical simulation of Ising systems

Gyan Bhanot, Michael Creutz, G. Bhanot, 1984 .

Autophagy Suppresses Tumorigenesis through Elimination of p62

Gyan Bhanot, Kevin Bray, Anupama Reddy, 2009, Cell.

Lactase Persistence and Lipid Pathway Selection in the Maasai

Gabriela Alexe, Gyan Bhanot, Shridar Ganesan, 2012, PloS one.

A 2D mechanistic model of breast ductal carcinoma in situ (DCIS) morphology and progression.

Gyan Bhanot, Troy Shinbrot, Shridar Ganesan, 2010, Journal of theoretical biology.

A fast vectorized program for the CDC Cyber 205 to simulate the Ising spin glass in three dimensions

Gyan Bhanot, Dennis W. Duke, Román Salvador, 1988 .

Identifying microRNA/mRNA dysregulations in ovarian cancer

Gyan Bhanot, Michael Seiler, Gunaretnam Rajagopal, 2011, BMC Research Notes.

Patterns of Evolution and Host Gene Mimicry in Influenza and Other RNA Viruses

Gyan Bhanot, Raul Rabadan, Benjamin D. Greenbaum, 2008, PLoS pathogens.

The partition function of Z(2) and Z(8) lattice gauge theory in four dimensions, a novel approach to simulations of lattice systems

Gyan Bhanot, Román Salvador, Khalil M. Bitar, 1987 .

Towards Improved Cancer Diagnosis and Prognosis Using Analysis of Gene Expression Data and Computer Aided Imaging

Gabriela Alexe, Gyan Bhanot, Anant Madabhushi, 2009, Experimental biology and medicine.

A new method for the partition function of discrete systems with application to the 3D Ising model

Gyan Bhanot, Román Salvador, G. Bhanot, 1987 .

Immune activation and response to pembrolizumab in POLE-mutant endometrial cancer.

Gyan Bhanot, Shridar Ganesan, Hua Zhong, 2016, The Journal of clinical investigation.

Automated Reconstruction Algorithm for Identification of 3D Architectures of Cribriform Ductal Carcinoma In Situ

Gyan Bhanot, Troy Shinbrot, Hitoshi Iyatomi, 2012, PloS one.

The somatic genomic landscape of chromophobe renal cell carcinoma.

Lawrence A. Donehower, Peter J. Park, Gyan Bhanot, 2014, Cancer cell.