Christian J Stoeckert

发表

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

Nigel W. Hardy, Chris F. Taylor, John M. Hancock, 2008, Nature Biotechnology.

Using ontologies to annotate microarray experiments.

Helen Parkinson, Christian J Stoeckert, Patricia L Whetzel, 2006, Methods in enzymology.

FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes

Cristina Aurrecoechea, Christiane Hertz-Fowler, Jessica C Kissinger, 2018, Journal of fungi.

Development of FuGO: an ontology for functional genomics investigations.

Chris F. Taylor, Ryan R Brinkman, Daniel Schober, 2006, Omics : a journal of integrative biology.

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Thorsten Henrich, Mirana Ramialison, John Quackenbush, 2008, Nature Biotechnology.

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

Bjoern Peters, Alan Ruttenberg, David Osumi-Sutherland, 2021, Database J. Biol. Databases Curation.

Standardization of assay representation in the Ontology for Biomedical Investigations

Mathias Brochhausen, Richard H Scheuermann, Gully Burns, 2021, Database J. Biol. Databases Curation.

STAC: A method for testing the significance of DNA copy number aberrations across multiple array-CGH experiments.

Christian J Stoeckert, Joel Greshock, Tara L. Naylor, 2006, Genome research.

Propagation of adipogenic signals through an epigenomic transition state.

Jonathan Schug, Elisabetta Manduchi, Christian J Stoeckert, 2010, Genes & development.

PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale.

Jonathan Schug, Christian J Stoeckert, Yong Zhang, 2008, Genes & development.

A molecular profile of a hematopoietic stem cell niche

Christian J Stoeckert, C. Stoeckert, B. Brunk, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Functional genomics of the endocrine pancreas: the pancreas clone set and PancChip, new resources for diabetes research.

Angel Pizarro, Christian J Stoeckert, Sandra W Clifton, 2002, Diabetes.

The underlying principles of scientific publication.

Duccio Cavalieri, John Quackenbush, Terry Gaasterland, 2002, Bioinformatics.

Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays

Christian J Stoeckert, Carolyn Mies, Sharon J Diskin, 2007, PLoS genetics.

PlasmoDB v5: new looks, new genomes.

Cristina Aurrecoechea, Bindu Gajria, Steve Fischer, 2006, Trends in parasitology.

Computational modeling of the Plasmodium falciparum interactome reveals protein function on a genome-wide scale.

Christian J Stoeckert, Shailesh V. Date, Shailesh V Date, 2006, Genome research.

Standards for Microarray Data

Duccio Cavalieri, John Quackenbush, Terry Gaasterland, 2002, Science.

Systems biology-defined NF-κB regulons, interacting signal pathways and networks are implicated in the malignant phenotype of head and neck cancer cell lines differing in p53 status

Christian J Stoeckert, Shane T. Jensen, Shane T Jensen, 2008, Genome Biology.

Much room for improvement in deposition rates of expression microarray datasets

Christian J Stoeckert, Neil J McKenna, David L. Steffen, 2008, Nature Methods.

Ontogeny of erythroid gene expression.

Christian J Stoeckert, Emily Greenfest-Allen, Jeffrey Malik, 2013, Blood.

Gene discovery in the apicomplexa as revealed by EST sequencing and assembly of a comparative gene database.

Jessica C Kissinger, Todd Wylie, Christian J Stoeckert, 2003, Genome research.

Comparison of different labeling methods for two-channel high-density microarray experiments.

Elisabetta Manduchi, Christian J Stoeckert, Gregory R Grant, 2002, Physiological genomics.

Integrating computationally assembled mouse transcript sequences with the Mouse Genome Informatics (MGI) database

John Quackenbush, Carol J Bult, Christian J Stoeckert, 2003, Genome Biology.

Plasmodium research in the postgenomic era.

Christian J Stoeckert, Michael T Ferdig, Manoj Duraisingh, 2006, Trends in parasitology.

Transcriptional program of the endocrine pancreas in mice and humans.

Jonathan Crabtree, Elisabetta Manduchi, Angel Pizarro, 2003, Diabetes.

Clustering of genes into regulons using integrated modeling-COGRIM

Christian J Stoeckert, Shane T. Jensen, Shane T Jensen, 2007, Genome Biology.

Fidelity and enhanced sensitivity of differential transcription profiles following linear amplification of nanogram amounts of endothelial mRNA.

Elisabetta Manduchi, Christian J Stoeckert, Gregory R Grant, 2003, Physiological genomics.