Peter Donnelly

发表

Looking towards the Future

Peter Donnelly, Joel Benson, Paul Kirk, 2012 .

Assessing association between protein truncating variants and quantitative traits

Matti Pirinen, Peter Donnelly, Mark I. McCarthy, 2013, Bioinform..

Using E‐Learning to Teach

Peter Donnelly, Joel Benson, Paul Kirk, 2012 .

Access to E‐Learning

Peter Donnelly, Joel Benson, Paul Kirk, 2012 .

A comparison of bayesian methods for haplotype reconstruction from population genotype data.

Peter Donnelly, Matthew Stephens, P. Donnelly, 2003, American journal of human genetics.

Examples of Technology in Use

Peter Donnelly, Joel Benson, Paul Kirk, 2012 .

Inference in Forensic Identification

Peter Donnelly, David J. Balding, P. Donnelly, 1995 .

Probability and Proof in State v. Skipper: An Internet Exchange

Peter Donnelly, Ronald J. Allen, Bernard Robertson, 1995 .

Bayesian analysis of genetic association across tree-structured routine healthcare data in the UK Biobank

Peter Donnelly, Gil McVean, Alexander Dilthey, 2017 .

Superfamilies of Evolved and Designed Networks

Peter Donnelly, Matthew Stephens, Jonathan K. Pritchard, 2004 .

A robust clustering algorithm for identifying problematic samples in genome-wide association studies

Peter Donnelly, Amy Strange, Chris C. A. Spencer, 2011, Bioinform..

Automated bolting and meshing on a continuous miner for roadway development

Peter Donnelly, Ian Oxley, Stephen van Duin, 2013 .

Medical Device Software Traceability

Fergal McCaffery, Peter Donnelly, Valentine Casey, 2012, Software and Systems Traceability.

A Greedy Homotopy Method for Regression with Nonconvex Constraints

Peter Donnelly, Fabian L. Wauthier, P. Donnelly, 2014, AISTATS.

Bayesian hierarchical mixture modeling to assign copy number from a targeted CNV array

Peter Donnelly, Chris Holmes, Niall Cardin, 2011, Genetic epidemiology.

Bayesian Methods for Statistical Reconstruction of Haplotypes

Peter Donnelly, 2002, RECOMB 2002.

Assessing allele-specific expression across multiple tissues from RNA-seq read data

Matti Pirinen, Peter Donnelly, Mark I. McCarthy, 2015, Bioinform..

Mathematical and statistical aspects of DNA and protein sequence analysis - Preface

Peter Donnelly, Sir Walter Bodmer, 1994 .

HAPGEN2: simulation of multiple disease SNPs

Peter Donnelly, Zhan Su, Jonathan Marchini, 2011, Bioinform..

Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies

Matti Pirinen, Peter Donnelly, Chris C. A. Spencer, 2012, 1207.4886.

Writing IIS applications in dyalog APL

Peter Donnelly, 2002, APLQ.

THE PROSECUTORS FALLACY AND DNA EVIDENCE

Peter Donnelly, Dj Balding, P. Donnelly, 1994 .

Identification of 15 new psoriasis susceptibility loci highlights the role of innate immunity

Matti Pirinen, Christian Gieger, Peter Donnelly, 2012 .

A Genome-Wide Metabolic QTL Analysis in Europeans Implicates Two Loci Shaped by Recent Positive Selection

Peter Donnelly, Mark I. McCarthy, Kourosh R. Ahmadi, 2011, PLoS genetics.

Quantifying the Underestimation of Relative Risks from Genome-Wide Association Studies

Peter Donnelly, Damjan Vukcevic, P. Donnelly, 2011, PLoS genetics.

Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease

Peter Donnelly, Zamin Iqbal, Richard G. Everitt, 2012, Proceedings of the National Academy of Sciences.

The correlation between reading and mathematics ability at age twelve has a substantial genetic component

Matti Pirinen, Peter Donnelly, Robert Plomin, 2014, Nature Communications.

Particle Representations for Measure-Valued Population Models

Peter Donnelly, Thomas G. Kurtz, P. Donnelly, 1999 .

Application of Coalescent Methods to Reveal Fine-Scale Rate Variation and Recombination Hotspots

Peter Donnelly, Paul Fearnhead, Simon Myers, 2004, Genetics.

Review: Alan F. Karr, Point Processes and their Statistical Inference

Peter Donnelly, 1987 .

Discussion on the meeting on ‘Statistical modelling and analysis of genetic data’

Terence P. Speed, Peter Donnelly, Dirk Husmeier, 2002 .

WEAK CONVERGENCE TO A MARKOV CHAIN WITH AN ENTRANCE BOUNDARY: ANCESTRAL PROCESSES IN POPULATION GENETICS'

Peter Donnelly, P. Donnelly, 1991 .

On the Functional Central Limit Theorem for the Ewens Sampling Formula

Peter Donnelly, Simon Tavaré, Thomas G. Kurtz, 1991 .

Recessive Mutations in SPTBN2 Implicate β-III Spectrin in Both Cognitive and Motor Development

Peter Donnelly, Gilean McVean, Jean-Baptiste Cazier, 2012, PLoS genetics.

Ancestral Inference in Population Genetics Models with Selection (with Discussion)

Peter Donnelly, Matthew Stephens, P. Donnelly, 2003 .

Human metabolic profiles are stably controlled by genetic and environmental variation

Peter Donnelly, Juris Viksna, Ugis Sarkans, 2011, Molecular Systems Biology.

A countable representation of the Fleming-Viot measure-valued diffusion

Peter Donnelly, Thomas G. Kurtz, P. Donnelly, 1996 .

Reply to Zhang et al.

Peter Donnelly, Matthew Stephens, Nicholas J. Smith, 2001 .

Bayesian analysis of genetic association across tree-structured routine healthcare data in the UK Biobank

Peter Donnelly, Gil McVean, Alexander Dilthey, 2017, Nature Genetics.

Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci

Peter Donnelly, Michael Weisman, John D Reveille, 2013, Nature Genetics.

Congenital myasthenic syndromes due to mutations in ALG2 and ALG14

Peter Donnelly, Nicola Carboni, Hanns Lochmüller, 2013, Brain : a journal of neurology.

Human recombination hot spots hidden in regions of strong marker association

Peter Donnelly, Simon Myers, P. Donnelly, 2005, Nature Genetics.

Whole-genome sequencing of bladder cancers reveals somatic CDKN1A mutations and clinicopathological associations with mutation burden

Peter Donnelly, Gil McVean, Paolo Piazza, 2014, Nature Communications.

Dissection of the genetics of Parkinson's disease identifies an additional association 5′ of SNCA and multiple associated haplotypes at 17q21

Matti Pirinen, Peter Donnelly, Robert Plomin, 2010, Human molecular genetics.

A new multipoint method for genome-wide association studies via imputation of genotypes : Supplementary Methods

Peter Donnelly, Gil McVean, Simon Myers, 2007 .

Progress and challenges in genome-wide association studies in humans

Peter Donnelly, P. Donnelly, 2008, Nature.

Homozygous mutations in a predicted endonuclease are a novel cause of congenital dyserythropoietic anemia type I

Peter Donnelly, Gil McVean, Chris P. Ponting, 2013, Haematologica.

CONSTANT PREDATOR-PREY RATIOS: AN ARITHMETICAL ARTIFACT?

Peter Donnelly, P. Donnelly, G. A. Watterson, 1993 .

The Influence of Recombination on Human Genetic Diversity

Peter Donnelly, Gil McVean, Simon Myers, 2006, PLoS genetics.

Homozygous microdeletion of exon 5 in ZNF277 in a girl with specific language impairment

Peter Donnelly, Gillian Baird, Simon E Fisher, 2014, European Journal of Human Genetics.

Multiple rare alleles at LDLR and APOA5 confer risk for early-onset myocardial infarction

David M. Herrington, Adam Kiezun, Peter Donnelly, 2014, Nature.

Genealogical processes for Fleming-Viot models with selection and recombination

Peter Donnelly, Thomas G. Kurtz, P. Donnelly, 1999 .

Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins

Matti Pirinen, David M. Herrington, Alex Doney, 2014, Nature Communications.

On conditional intensities and on interparticle correlation in non-linear death processes

Peter Donnelly, Timothy C. Brown, T. C. Brown, 1993, Advances in Applied Probability.

Genome-wide and fine-resolution association analysis of malaria in West Africa

Peter Donnelly, Michael Inouye, Giorgio Sirugo, 2009, Nature Genetics.

Appealing statistics.

Peter Donnelly, P. Donnelly, 2007, Medicine, science, and the law.

The asymptotic behavior of an urn model arising in population genetics

Peter Donnelly, Thomas G. Kurtz, P. Donnelly, 1996 .

Replicating genotype – phenotype associations What constitutes replication of a genotype – phenotype association , and how best can it be achieved ?

Peter Donnelly, Lon R. Cardon, Ellen M. Wijsman, 2007 .

A Bayesian Method for Detecting and Characterizing Allelic Heterogeneity and Boosting Signals in Genome-Wide Association Studies

Peter Donnelly, Niall Cardin, Jonathan Marchini, 2009, 1010.4670.

Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073

Ken Chen, Joshua M. Korn, Afidalina Tumian, 2010 .

Germline mutations in the proof-reading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas

Peter Donnelly, Jonathan Grimes, Gilean McVean, 2012, Nature Genetics.

Approach to Stationarity of the Bernoulli–Laplace Diffusion Model

Peter Donnelly, Aidan Sudbury, P. Donnelly, 1994, Advances in Applied Probability.

Progress and promise in understanding the genetic basis of common diseases

Peter Donnelly, Alkes L. Price, Chris C. A. Spencer, 2015, Proceedings of the Royal Society B: Biological Sciences.

Genome-wide association study identifies five new schizophrenia loci

Anders D. Børglum, Peter Donnelly, Jianxin Shi, 2011, Nature Genetics.

Clinical whole-genome sequencing in severe early-onset epilepsy reveals new genes and improves molecular diagnosis

Peter Donnelly, Gil McVean, Jean-Baptiste Cazier, 2014, Human molecular genetics.

A statistical method for predicting classical HLA alleles from SNP data.

Peter Donnelly, Gil McVean, Stephen Leslie, 2008, American journal of human genetics.

Assessing population differentiation and isolation from single‐nucleotide polymorphism data

Peter Donnelly, Kari Stefansson, George Nicholson, 2002 .

Strong approximations for epidemic models

Peter Donnelly, Frank Ball, P. Donnelly, 1995 .

A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1

Matti Pirinen, Peter Donnelly, Robert Plomin, 2010, Nature Genetics.

How convincing is DNA evidence?

Peter Donnelly, David J. Balding, P. Donnelly, 1994, Nature.

Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas

Peter Donnelly, Jonathan Grimes, Gilean McVean, 2013, Nature Genetics.

Multiple Instances of Ancient Balancing Selection Shared Between Humans and Chimpanzees

Peter Donnelly, Guy Sella, Ronald Bontrop, 2013, Science.

Zhou et al. reply

Peter Donnelly, Kaixin Zhou, P. Donnelly, 2012, Nature Genetics.

Genes, fossils and behaviour : an integrated approach to human evolution

Peter Donnelly, Robert A. Foley, P. Donnelly, 2001 .

Continuity and weak convergence of ranked and size-biased permutations on the infinite simplex

Peter Donnelly, Paul Joyce, P. Donnelly, 1989 .

A common sequence motif associated with recombination hot spots and genome instability in humans

Peter Donnelly, Gil McVean, Simon Myers, 2008, Nature Genetics.

Sequence data and association statistics from 12,940 type 2 diabetes cases and controls

Taesung Park, Christian Gieger, Tien Yin Wong, 2017, Scientific Data.

Mosaic PPM1D mutations are associated with predisposition to breast and ovarian cancer

Peter Donnelly, Mark I. McCarthy, Nazneen Rahman, 2012, Nature.

Edinburgh Research Explorer Common variants near ATM are associated with glycemic response to metformin in type 2 diabetes

Peter Donnelly, Robert Plomin, Elvira Bramon, 2022 .