Steven Weaver

phylotree.js - a JavaScript library for application development and interactive data visualization in phylogenetics

Stephen D. Shank, Sergei L. Kosakovsky Pond, Steven Weaver, 2018, BMC Bioinformatics.

IDEPI: Rapid Prediction of HIV-1 Antibody Epitopes and Other Phenotypic Features from Sequence Data Using a Flexible Machine Learning Platform

Ben Murrell, Sergei L. Kosakovsky Pond, Konrad Scheffler, 2014, PLoS Comput. Biol..

Full-Length Envelope Analyzer (FLEA): A tool for longitudinal analysis of viral amplicons

Ben Murrell, Sergei L. Kosakovsky Pond, Steven Weaver, 2017, bioRxiv.

Datamonkey 2.0: a modern web application for characterizing selective and other evolutionary processes.

Steven Weaver, Stephanie J. Spielman, Sergei L. Kosakovsky Pond, 2018, Molecular biology and evolution.

Rapid Sequencing of Complete env Genes from Primary HIV-1 Samples.

Yan Guo, Ben Murrell, Pham Phung, 2016, Virus evolution.

HIV-TRACE (TRAnsmission Cluster Engine): a Tool for Large Scale Molecular Epidemiology of HIV-1 and Other Rapidly Evolving Pathogens.

Steven Weaver, Sergei L. Kosakovsky Pond, Sergei L Kosakovsky Pond, 2018, Molecular biology and evolution.

Gene-wide identification of episodic selection.

Ben Murrell, Konrad Scheffler, Steven Weaver, 2015, Molecular biology and evolution.