Susan J Clark

发表

BayMeth: improved DNA methylation quantification for affinity capture sequencing data using a flexible Bayesian approach

Andrea Riebler, Mark D Robinson, Clare Stirzaker, 2013, Genome Biology.

Regional activation of the cancer genome by long-range epigenetic remodeling.

Dario Strbenac, Robert L Sutherland, Mark D Robinson, 2013, Cancer cell.

Conversion-specific detection of DNA methylation using real-time polymerase chain reaction (ConLight-MSP) to avoid false positives.

Peter Molloy, Keith Rand, Wenjia Qu, 2002, Methods.

ZNF300P1 Encodes a lincRNA that regulates cell polarity and is epigenetically silenced in type II epithelial ovarian cancer

Robert L Sutherland, Susan J Clark, N. Hacker, 2014, Molecular Cancer.

DNA methylation: Bisulphite modification and analysis

Peter L Molloy, Clare Stirzaker, Susan J Clark, 2006, Nature Protocols.

Copy-number-aware differential analysis of quantitative DNA sequencing data

Dario Strbenac, Terence P Speed, Mark D Robinson, 2012, Genome research.

Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations

Aaron T. L. Lun, Fabian A. Buske, Denis C. Bauer, 2016, Genome research.

Identification and resolution of artifacts in bisulfite sequencing.

Christoph Grunau, Clare Stirzaker, Susan J Clark, 2002, Methods.

Action at a distance: epigenetic silencing of large chromosomal regions in carcinogenesis.

Susan J Clark, S. Clark, 2007, Human molecular genetics.

DNA methylation changes in ovarian cancer: implications for early diagnosis, prognosis and treatment.

Susan J Clark, N. Hacker, S. Clark, 2008, Gynecologic oncology.

Methylation sequencing from limiting DNA: embryonic, fixed, and microdissected cells.

Susan J Clark, S. Clark, D. Millar, 2002, Methods.

Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation.

Dario Strbenac, Terence P Speed, Mark D Robinson, 2010, Genome research.

Coordinated epigenetic repression of the miR‐200 family and miR‐205 in invasive bladder cancer

Jørgen Kjems, Michael Borre, Jesper B Bramsen, 2011, International journal of cancer.

ELF5 modulates the estrogen receptor cistrome in breast cancer

Warren Kaplan, Mark P Molloy, Christoph Krisp, 2020, PLoS genetics.

Epigenetic remodeling in colorectal cancer results in coordinate gene suppression across an entire chromosome band

Clare Stirzaker, Susan J Clark, S. Clark, 2006, Nature Genetics.

Disruption of the 3D cancer genome blueprint.

Susan J Clark, S. Clark, Joanna Achinger-Kawecka, 2017, Epigenomics.

Methylome sequencing in triple-negative breast cancer reveals distinct methylation clusters with prognostic value

Rodney J Scott, Matt Trau, Mark D Robinson, 2015, Nature Communications.

Permissive Transcriptional Activity at the Centromere through Pockets of DNA Hypomethylation

Jeffrey M Craig, Jenny Z Song, Susan J Clark, 2005, PLoS genetics.

De novo identification of differentially methylated regions in the human genome

Peter L Molloy, Ruth Pidsley, Timothy J. Peters, 2015, Epigenetics & Chromatin.

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias

Dario Strbenac, Mark D Robinson, Clare Stirzaker, 2011, Epigenetics.

BCL-2 Hypermethylation Is a Potential Biomarker of Sensitivity to Antimitotic Chemotherapy in Endocrine-Resistant Breast Cancer

Andrew V Biankin, Fatima Valdes-Mora, David Gallego-Ortega, 2013, Molecular Cancer Therapeutics.

DNA methylation and gene silencing in cancer: which is the guilty party?

Susan J Clark, S. Clark, John Melki, 2002, Oncogene.