Ambrose J. Carr

发表

Starfish: Scalable Pipelines for Image-based Transcriptomics

Justin T. Kiggins, Shannon Axelrod, Matthew Cai, 2021, J. Open Source Softw..

Single-cell Map of Diverse Immune Phenotypes Driven by the Tumor Microenvironment

Phuong Dao, Sandhya Prabhakaran, Elham Azizi, 2018 .

Single-Cell Immune Map of Breast Carcinoma Reveals Diverse Phenotypic States Driven by the Tumor Microenvironment

Phuong Dao, Sandhya Prabhakaran, Dana Pe'er, 2017, bioRxiv.

Regenerative lineages and immune-mediated pruning in lung cancer metastasis

Samuel F. Bakhoum, John T. Poirier, Charles M. Rudin, 2019, Nature Medicine.

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion

Kevin R. Moon, Ambrose J. Carr, D. Pe’er, 2018, Cell.

A Single-Cell Immune Map of Normal and Cancerous Breast Reveals an Expansion of Phenotypic States Driven by the Tumor Microenvironment

Ambrose J. Carr, Ambrose Carr, 2018 .

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

Ambrose J. Carr, D. Pe’er, L. Mazutis, 2018, Cell.

Bayesian Inference for Single-cell Clustering and Imputing

Ambrose J. Carr, D. Pe’er, E. Azizi, 2017 .

MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data

Kevin R. Moon, Ambrose J. Carr, D. Pe’er, 2017, bioRxiv.

Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation.

Takamasa Kudo, Keara M. Lane, Derek N. Macklin, 2017, Cell systems.

cellxgene: a performant, scalable exploration platform for high dimensional sparse matrices

Sidney M. Bell, Ambrose J. Carr, Charlotte Weaver, 2021, bioRxiv.

Scalable microfluidics for single-cell RNA printing and sequencing

Ambrose J. Carr, D. Pe’er, A. Rizvi, 2015, Genome Biology.

Scalable microfluidics for single-cell RNA printing and sequencing

Ambrose Carr, Dana Pe’er, Peter A. Sims, 2015, Genome Biology.

The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide

Maja A. Puchades, Timothy L. Tickle, Thomas L. Athey, 2022, bioRxiv.

Measuring Signaling and R NA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NFk B Activation Graphical Abstract Highlights

Keara M. Lane, Derek N. Macklin, Mialy M. DeFelice, 2017 .

Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data

Sandhya Prabhakaran, Elham Azizi, Ambrose Carr, 2016, ICML.

Regenerative lineages and immune-mediated pruning in lung cancer metastasis

Ashley M. Laughney, Ambrose J. Carr, D. Pe’er, 2019, Nature Medicine.

Integrated multimodal cell atlas of Alzheimer’s disease

Brian R. Lee, Brian R. Long, Ambrose J. Carr, 2023, bioRxiv.

Integrated multimodal cell atlas of Alzheimer’s disease

Brian R. Lee, Brian R. Long, Ambrose J. Carr, 2023, bioRxiv.

A guide to the BRAIN Initiative Cell Census Network data ecosystem

Maja A. Puchades, Timothy L. Tickle, Thomas L. Athey, 2023, PLoS biology.

CZ CELL×GENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

Sidney M. Bell, Ambrose J. Carr, B. Aevermann, 2023, bioRxiv.