Andrey A. Mironov

发表

Two genetic algorithms for identification of regulatory signals

Elena D. Stavrovskaya, Andrey A. Mironov, 2003, Silico Biol..

Evidence for Widespread Association of Mammalian Splicing and Conserved Long-Range RNA Structures

Mikhail S. Gelfand, Andrey A. Mironov, Dmitri D. Pervouchine, 2012, RECOMB.

Gene recognition in eukaryotic DNA by comparison of genomic sequences

Mikhail S. Gelfand, Andrey A. Mironov, Pavel S. Novichkov, 2001, Bioinform..

Spliced Alignment: A New Approach to Gene Recognition

Mikhail S. Gelfand, Pavel A. Pevzner, Andrey A. Mironov, 1996, CPM.

Mikhail S. Gelfand, Andrey A. Mironov, Pavel S. Novichkov, 2001, Bioinform..

Exploring Massive, Genome Scale Datasets with the GenometriCorr Package

Andrey A. Mironov, Sarah J. Wheelan, Vsevolod J. Makeev, 2012, PLoS Comput. Biol..

Coloc-stats: a unified web interface to perform colocalization analysis of genomic features

Diana Domanska, Chakravarthi Kanduri, Boris Simovski, 2018, Nucleic Acids Res..

RegTransBase—a database of regulatory sequences and interactions in a wide range of prokaryotic genomes

Inna Dubchak, Mikhail S. Gelfand, Adam P. Arkin, 2006, Nucleic Acids Res..

Mapping DNA by stochastic relaxation: a new approach to fragment sizes

Andrey A. Mironov, A. V. Grigorjev, 1990, Comput. Appl. Biosci..

Alternative splicing and protein function

Ramil N. Nurtdinov, Mikhail S. Gelfand, Dmitrij Frishman, 2005, BMC Bioinformatics.

Rnakinetics: a Web Server that Models Secondary Structure Kinetics of an Elongating RNA

Andrey A. Mironov, Dmitri D. Pervouchine, Alexander V. Favorov, 2006, J. Bioinform. Comput. Biol..

Automated Regulon Content Prediction and Estimation of PWM Quality

Inna Dubchak, Elena D. Stavrovskaya, Andrey A. Mironov, 2012, BIOINFORMATICS.

RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach

Inna Dubchak, Mikhail S. Gelfand, Adam P. Arkin, 2010, Nucleic Acids Res..

ProMult: Prediction of the Exon-Intron Structure by Spliced Alignment with Several Proteins

Andrey A. Mironov, D. V. Vinogradov, 2003 .

Fast assessment of the correlation between coverage-like genomic features and its statistical significance

Elena D. Stavrovskaya, Andrey A. Mironov, Alexander V. Favorov, 2013, IWBBIO.

An Overview of the Algorithmic Session of MCCMB'05

Gregory Kucherov, Mikhail A. Roytberg, Andrey A. Mironov, 2006, J. Bioinform. Comput. Biol..

Comparative Analysis of Regulatory Patterns in Bacterial Genomes

Mikhail S. Gelfand, Andrey A. Mironov, Pavel S. Novichkov, 2000, Briefings Bioinform..

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies

Robert B. Russell, Mikhail S. Gelfand, Andrey A. Mironov, 2010, Algorithms for Molecular Biology.

Algorithms and software for support of gene identification experiments

Mikhail S. Gelfand, Pavel A. Pevzner, Sing-Hoi Sze, 1998, Bioinform..

Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk)

Mikhail S. Gelfand, Andrey A. Mironov, Dmitry A. Rodionov, 2009, ISBRA.

A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length

Mikhail S. Gelfand, Andrey A. Mironov, Vsevolod J. Makeev, 2005, Bioinform..

RNASurface: fast and accurate detection of locally optimal potentially structured RNA segments

Andrey A. Mironov, Ruslan A. Soldatov, Svetlana V. Vinogradova, 2014, Bioinform..

SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins

Mikhail S. Gelfand, Andrey A. Mironov, Pavel S. Novichkov, 2004, Nucleic Acids Res..

DNASUN: a package of computer programs for the biotechnology laboratory

Pavel A. Pevzner, Andrey A. Mironov, V. F. Lebedev, 1995, Comput. Appl. Biosci..

StereoGene: Rapid Estimation of Genomewide Correlation of Continuous or Interval Feature Data

Elena D. Stavrovskaya, Andrey A. Mironov, Sarah J. Wheelan, 2017, bioRxiv.

Combining diverse evidence for gene recognition in completely sequenced bacterial genomes

Mikhail S. Gelfand, Dmitrij Frishman, Hans-Werner Mewes, 1998, German Conference on Bioinformatics.

A Generalized Hidden Markov Model for Prediction of Cis-regulatory Modules in Eukaryote Genomes and Description of Their Internal Structure

Andrey A. Mironov, Vsevolod J. Makeev, Alexander V. Favorov, 2012, BIOINFORMATICS.

Exact mapping of prokaryotic gene starts

Mikhail S. Gelfand, Andrey A. Mironov, M. V. Baytaluk, 2002, Briefings Bioinform..

StereoGene: Rapid Estimation of Genomewide Correlation of Continuous or Interval Feature Data

Elena D. Stavrovskaya, Andrey A. Mironov, Sarah J. Wheelan, 2017, bioRxiv.

SST versus EST in Gene Recognition (Invited Paper).

Andrey A. Mironov, Pavel A. Pevzner, 1998 .

An extended catalogue of tandem alternative splice sites in human tissue transcriptomes

Andrey A. Mironov, Dmitri D. Pervouchine, Olga V. Kalinina, 2021, PLoS Comput. Biol..

COMPUTER ANALYSIS OF REGULATORY SIGNALS IN COMPLETE BACTERIAL GENOMES. LEXA AND DINR BINDING SITES

Mikhail S. Gelfand, Andrey A. Mironov, 1999 .

ArcA regulator of gamma-proteobacteria: Identification of the binding signal and description of the regulon

Mikhail S. Gelfand, Andrey A. Mironov, Alexander V. Favorov, 2003 .

Spatial Proximity and Similarity of the Epigenetic State of Genome Domains

Mikhail S. Gelfand, Andrey A. Mironov, Gennady G. Fedonin, 2012, PloS one.

Application of sorting and next generation sequencing to study 5΄-UTR influence on translation efficiency in Escherichia coli

Mikhail S. Gelfand, Elena S. Kostryukova, Andrey A. Mironov, 2016, Nucleic acids research.