Marisa W. Torres

High-Throughput Virtual Screening of Small Molecule Inhibitors for SARS-CoV-2 Protein Targets with Deep Fusion Models

Stewart He, Adam Zemla, Felice C. Lightstone, 2021, SC21: International Conference for High Performance Computing, Networking, Storage and Analysis.

Design of Genomic Signatures for Pathogen Identification and Characterization

Jonathan E. Allen, Marisa W. Torres, T. Slezak, 2010, Microbial Forensics.

A Computational Pipeline to Identify and Characterize Binding Sites and Interacting Chemotypes in SARS-CoV-2

Marisa W. Torres, Jonathan E. Allen, A. Zemla, 2022, bioRxiv.

Discovery of Small-Molecule Inhibitors of SARS-CoV-2 Proteins Using a Computational and Experimental Pipeline

Oscar A. Negrete, Sergio E. Wong, Edwin A. Saada, 2021, Frontiers in Molecular Biosciences.

Clustering Protein Binding Pockets and Identifying Potential Drug Interactions: A Novel Ligand-Based Featurization Method

Sergio E. Wong, Marisa W. Torres, Jonathan E. Allen, 2023, bioRxiv.

LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures

Brian R. Baker, John M. Dzenitis, Elizabeth A. Vitalis, 2011, BMC Bioinformatics.

Graph-based featurization methods for classifying small molecule compounds

Marisa W. Torres, A. Zemla, Jonathan R. Allen, 2022, UC Merced Undergraduate Research Journal.