Melissa J. Davis
发表
Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT
pdf
Karin M. Verspoor,
Karin Verspoor,
Aparna Elangovan,
2021,
BMC Bioinform..
Karin Verspoor,
Douglas E. V. Pires,
Aparna Elangovan,
2022,
BMC Bioinform..
Kaitlin G Scheer,
Melissa J. Davis,
C. Bracken,
2018,
Cell systems.
Kaitlin G Scheer,
Melissa J. Davis,
C. Bracken,
2017,
bioRxiv.
Melissa J. Davis,
P. Madhamshettiwar,
S. Maetschke,
2012,
Genome Medicine.
Melissa J. Davis,
M. Ragan,
Chang Shin,
2012,
Molecular bioSystems.
Mark A Ragan,
Melissa J Davis,
Melissa J. Davis,
2013,
Genome Medicine.
Melissa J. Davis,
A. Bacic,
M. Doblin,
2016,
Front. Plant Sci..
Karin M. Verspoor,
Melissa J. Davis,
Qingyu Chen,
2017
.
Melissa J. Davis,
S. Batalov,
H. Matsuda,
2003,
Genome research.
Melissa J. Davis,
D. Budden,
Joseph Cursons,
2014,
Epigenetics & Chromatin.
Matthew E. Ritchie,
Melissa J. Davis,
Joseph Cursons,
2020,
Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer.
Melissa J. Davis,
X. Gu,
Leming Shi,
2019,
Scientific Reports.
Fasheng Zhang,
Zheng Yuan,
Melissa J Davis,
2003,
Biochemical and biophysical research communications.
Kaitlin G Scheer,
Melissa J. Davis,
T. Le,
2019,
Nucleic acids research.
Joseph Cursons,
Soroor Hediyeh-Zadeh,
Melissa J. Davis,
2017,
Molecular Cancer Research.
Mark A Ragan,
Melissa J Davis,
Melissa J. Davis,
2009,
Proteomics.
Mark A. Ragan,
Antonio Reverter,
Stefan R. Maetschke,
2014,
Cancer informatics.
Mark A. Ragan,
Colleen C. Nelson,
Alperen Taciroglu,
2013
.
Satyajeet P. Khare,
Melissa J. Davis,
S. Hediyeh-zadeh,
2020,
Journal of Cell Science.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2019,
Genome Biology.
Melissa J. Davis,
S. Hediyeh-zadeh,
G. Smyth,
2020,
Nature Communications.
Melissa J. Davis,
K. Inder,
M. Hill,
2013,
Molecular bioSystems.
Melissa J. Davis,
J. Hancock,
R. Parton,
2012,
Developmental cell.
Melissa J. Davis,
M. Waltham,
C. Bracken,
2015,
Cell Communication and Signaling.
Melissa J. Davis,
Joseph Cursons,
M. Foroutan,
2019,
Cancer Immunology Research.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2022,
Cancers.
Kaitlin G Scheer,
Melissa J. Davis,
C. Bracken,
2019
.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2019,
F1000Research.
Using singscore to predict mutation status in acute myeloid leukemia from transcriptomic signatures.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2019,
F1000Research.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2019,
F1000Research.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2020,
bioRxiv.
Melissa J. Davis,
A. Rust,
D. Adams,
2013,
Proceedings of the National Academy of Sciences.
Chin Wee Tan,
Dharmesh D. Bhuva,
Melissa J. Davis,
2020,
European Respiratory Journal.
Melissa J. Davis,
S. Hediyeh-zadeh,
A. Webb,
2020,
bioRxiv.
Laura F. Dagley,
Melissa J. Davis,
S. Hediyeh-zadeh,
2020,
The Journal of experimental medicine.
Melissa J. Davis,
Monisha Samuel,
S. Mathivanan,
2022,
Oncogenesis.
Melissa J. Davis,
M. Wilkins,
S. Hediyeh-zadeh,
2020,
Molecular biology and evolution.
Blockade of the co-inhibitory molecule PD-1 unleashes ILC2-dependent anti-tumor immunity in melanoma
Melissa J. Davis,
S. Hediyeh-zadeh,
W. Shi,
2021,
Nature Immunology.
Melissa J. Davis,
E. Crampin,
Aparna Elangovan,
2015,
BMC Cancer.
Melissa J. Davis,
E. Eichler,
D. Nickerson,
2022,
EMBO molecular medicine.
Melissa J. Davis,
S. Hediyeh-zadeh,
F. Souza-Fonseca-Guimaraes,
2018,
Immunology and cell biology.
Melissa J. Davis,
K. Vandyke,
S. Gronthos,
2016
.
Melissa J. Davis,
S. Hediyeh-zadeh,
C. Mullighan,
2020,
Blood advances.
Melissa J. Davis,
D. Ovchinnikov,
D. Vagenas,
2016,
BMC Cancer.
Mark A. Ragan,
Stefan Maetschke,
Melissa J. Davis,
2013,
BMC Bioinformatics.
Jun Kawai,
Piero Carninci,
Yoshihide Hayashizaki,
2006,
Traffic.
Laura F. Dagley,
Melissa J. Davis,
Joseph Cursons,
2019,
Science Signaling.
Chin Wee Tan,
Dharmesh D. Bhuva,
Melissa J. Davis,
2022,
bioRxiv.
R. J. Murphy,
Ryan J. Murphy,
Melissa J. Davis,
2021,
Cells Tissues Organs.
R. J. Murphy,
Melissa J. Davis,
M. Jolly,
2020
.
Dharmesh D. Bhuva,
Melissa J. Davis,
Q. Nguyen,
2023,
bioRxiv.
Melissa J. Davis,
J. Olson,
B. Wainwright,
2017,
Clinical Cancer Research.
Melissa J. Davis,
J. Visvader,
G. Smyth,
2017,
Nature Communications.
Zheng Yuan,
Yoshihide Hayashizaki,
Hidemasa Bono,
2003,
Genome research.
Chin Wee Tan,
Melissa J. Davis,
R. Alizadeh-Navaei,
2021,
Frontiers in Immunology.
Melissa J. Davis,
S. Hediyeh-zadeh,
G. Smyth,
2019,
bioRxiv.
Melissa J. Davis,
S. Zadeh,
J. Trapani,
2022,
Journal for ImmunoTherapy of Cancer.
Melissa J. Davis,
S. Hediyeh-zadeh,
F. Souza-Fonseca-Guimaraes,
2020,
Frontiers in Immunology.
Melissa J. Davis,
A. Zannettino,
K. Vandyke,
2016,
Stem cells and development.
Melissa J. Davis,
X. Gu,
Leming Shi,
2019,
Scientific Reports.
Emily J. Girard,
Dharmesh D. Bhuva,
Melissa J. Davis,
2021,
Genome medicine.
Melissa J. Davis,
S. Hediyeh-zadeh,
W. Shi,
2019,
The Journal of experimental medicine.
Mark A. Ragan,
Stefan Maetschke,
Melissa J. Davis,
2013,
Briefings Bioinform..
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2018,
BMC Bioinformatics.
Melissa J. Davis,
Joseph Cursons,
M. Foroutan,
2018,
bioRxiv.
Jun Kawai,
Piero Carninci,
Yoshihide Hayashizaki,
2006,
PLoS genetics.
Deborah S. Barkauskas,
Chin Wee Tan,
Melissa J. Davis,
2021,
Molecular Cancer Research.
Anup D Shah,
Melissa J Davis,
Michelle M Hill,
2016,
Journal of proteome research.
Leonard J Foster,
Melissa J Davis,
Judith A Clements,
2011,
Molecular & Cellular Proteomics.
Ignacio González,
Kim-Anh Lê Cao,
Sébastien Déjean,
2012,
BioData Mining.
Melissa J Davis,
Melissa J. Davis,
S. Grimmond,
2022
.
Melissa J. Davis,
A. Hill,
J. Pascussi,
2018,
Cancer research.
Melissa J Davis,
Melissa J. Davis,
S. Grimmond,
2006,
Gene expression patterns : GEP.
Esha T. Shah,
Melissa J. Davis,
N. Haass,
2016,
Oncotarget.
SFPQ-ABL1 and BCR-ABL1 use different signaling networks to drive B-cell acute lymphoblastic leukemia
Melissa J. Davis,
S. Hediyeh-zadeh,
A. Oshlack,
2022,
Blood advances.
Melissa J Davis,
Melissa J. Davis,
S. Grimmond,
2006,
Gene expression patterns : GEP.
Mark A. Ragan,
Lars K. Nielsen,
Melissa J. Davis,
2013,
Briefings Bioinform..
Mikael Bodén,
Ralph Patrick,
Kim-Anh Lê Cao,
2012,
BMC Systems Biology.
Mark A. Ragan,
Chenwei Wang,
Stefan Maetschke,
2012,
Journal of Clinical Bioinformatics.
Melissa J. Davis,
S. Hediyeh-zadeh,
F. Souza-Fonseca-Guimaraes,
2021,
Cancers.
Jun Kawai,
Piero Carninci,
Yoshihide Hayashizaki,
2005,
Nucleic Acids Res..
Melissa J. Davis,
Joseph Cursons,
Momeneh Foroutan,
2018,
BMC Bioinformatics.
Melissa J. Davis,
K. Byth,
S. Loi,
2013,
Molecular endocrinology.
Melissa J. Davis,
K. Zen,
Jin Wang,
2021,
Genome medicine.
Mark A. Ragan,
Stefan Maetschke,
Martin Simonsen,
2011
.
François Vaillant,
Stephen Wilcox,
Gordon K Smyth,
2017,
Nature Communications.
Joseph Cursons,
Melissa J Davis,
Melissa J. Davis,
2017,
Methods in molecular biology.
Melissa J. Davis,
S. Hediyeh-zadeh,
S. Nutt,
2020,
Cell reports.
Liam G. Fearnley,
Melissa J. Davis,
Hannah Huckstep,
2021,
PeerJ.
Melissa J. Davis,
M. Waltham,
C. Bracken,
2015,
Cell Communication and Signaling.
Chin Wee Tan,
Melissa J. Davis,
Ashley P Ng,
2021,
Scientific Reports.
Melissa J. Davis,
R. Daly,
A. Yap,
2019,
bioRxiv.
Mark A. Ragan,
Melissa J. Davis,
Simon Wong,
2008
.
Melissa J. Davis,
M. Bodén,
S. Hediyeh-zadeh,
2021,
Nature Communications.
Melissa J. Davis,
K. Rogers,
A. Papenfuss,
2021,
Science Advances.
Chin Wee Tan,
Dharmesh D. Bhuva,
Melissa J. Davis,
2022,
medRxiv.
Melissa J. Davis,
S. Tsuriel,
S. Hediyeh-zadeh,
2021,
Cancer Research.
Chin Wee Tan,
Dharmesh D. Bhuva,
Givanna H. Putri,
2023,
bioRxiv.
Zheng Yuan,
Rohan D. Teasdale,
Melissa J. Davis,
2006,
Silico Biol..
Matthew E. Ritchie,
Melissa J. Davis,
A. Perkins,
2020,
Blood.
Melissa J. Davis,
Joseph Cursons,
Daniel Christopher Esposito,
2018,
bioRxiv.
Melissa J. Davis,
A. Strasser,
S. Hediyeh-zadeh,
2022,
Cell Death & Differentiation.
Mikael Bodén,
Fasheng Zhang,
Zheng Yuan,
2006,
Journal of proteome research.
Melissa J. Davis,
S. Chu,
P. Fuller,
2011,
Hormones & cancer.
David Chen,
Anup Shah,
Leonard J. Foster,
2014,
Nucleic Acids Res..
Melissa J. Davis,
S. Hediyeh-zadeh,
G. Smyth,
2020,
Nature Communications.
Chin Wee Tan,
Melissa J. Davis,
A. Kulasinghe,
2023,
bioRxiv.
Liam G. Fearnley,
Melissa J. Davis,
M. Esteller,
2023,
Advanced science.
Mark A. Ragan,
Muhammad Shoaib B. Sehgal,
Melissa J. Davis,
2010,
BMC Bioinformatics.
Monika S. Doblin,
Melissa J. Davis,
A. Bacic,
2023,
Plants.
Melissa J. Davis,
E. Crawford,
2017
.
Mark A. Ragan,
Joo-Young Choi,
Melissa J. Davis,
2010,
J. Chem. Inf. Model..
Assigning function to protein-protein interactions: a weakly supervised BioBERT based approach using PubMed abstracts
pdf
Karin Verspoor,
Aparna Elangovan,
Melissa Davis,
2020,
ArXiv.
Chin Wee Tan,
Dharmesh D. Bhuva,
Eric C Greenwald,
2023,
Cell chemical biology.
Melissa J. Davis,
C. Bracken,
G. Goodall,
2023,
Life Science Alliance.
Chin Wee Tan,
Dharmesh D. Bhuva,
Melissa J. Davis,
2023,
Nucleic Acids Res..
Jane Hunter,
Imran Khan,
Mark A. Ragan,
2008,
APBC.
Dharmesh D. Bhuva,
Melissa J. Davis,
A. Vargas,
2022,
medRxiv.
David T. W. Jones,
Dharmesh D. Bhuva,
Melissa J. Davis,
2023,
The Journal of molecular diagnostics : JMD.
Laura F. Dagley,
Melissa J. Davis,
M. Foroutan,
2022,
Cancer immunology research.
Melissa J. Davis,
C. Gilfillan,
M. Mond,
2014,
Thyroid : official journal of the American Thyroid Association.
Melissa J. Davis,
A. Webb,
Jarryd Martin,
2021,
bioRxiv.
Melissa J. Davis,
A. Webb,
Soroor Hediyeh-zadeh,
2023,
Molecular & cellular proteomics : MCP.
Kim-Anh Lê Cao,
Sébastien Déjean,
Melissa J. Davis,
2013
.
Jane Hunter,
Yuan-Fang Li,
Melissa J. Davis,
2008
.
Mark A. Ragan,
Melissa J. Davis,
Muhammad Shoaib,
2010
.
Melissa J. Davis,
Joseph Cursons,
Momeneh Foroutan,
2017,
bioRxiv.
Laura F. Dagley,
Melissa J. Davis,
Joseph Cursons,
2018,
bioRxiv.
Melissa J. Davis,
A. Rust,
D. Adams,
2013,
Proceedings of the National Academy of Sciences.
Melissa J. Davis,
P. Madhamshettiwar,
S. Maetschke,
2012,
Genome Medicine.
Melissa J. Davis,
D. Ovchinnikov,
D. Vagenas,
2016,
BMC Cancer.
Melissa J. Davis,
S. Maetschke,
M. Ragan,
2012,
Bioinform..
Dharmesh D. Bhuva,
Melissa J. Davis,
Q. Nguyen,
2023,
Genome Medicine.
Jane Hunter,
Yuan-Fang Li,
Melissa J. Davis,
2008,
WWW 2008.
Dharmesh D. Bhuva,
Melissa J. Davis,
Joseph Cursons,
2021
.