Rhiju Das

发表

Likelihood-based Fits of Folding Transitions (LiFFT) for Biomolecule Mapping Data

Rhiju Das, Rhiju Das, 2018, bioRxiv.

Structure prediction for CASP7 targets using extensive all‐atom refinement with Rosetta@home

Lars Malmström, David Baker, Dylan Chivian, 2007, Proteins.

Adding Diverse Noncanonical Backbones to Rosetta: Enabling Peptidomimetic Design

Andrew Watkins, Krishna Praneeth Kilambi, P. Douglas Renfrew, 2013, PloS one.

RNA design rules from a massive open laboratory

Minjae Lee, Sungroh Yoon, Adrien Treuille, 2014, Proceedings of the National Academy of Sciences.

Four Small Puzzles That Rosetta Doesn't Solve

Rhiju Das, Rhiju Das, 2011, PloS one.

Atomic-Accuracy Prediction of Protein Loop Structures through an RNA-Inspired Ansatz

Rhiju Das, Rhiju Das, 2012, PloS one.

Can biopolymer structures be sampled enumeratively? Atomic-accuracy RNA loop modeling by a stepwise ansatz

Rhiju Das, Parin Sripakdeevong, Wipapat Kladwang, 2011, 1104.5278.

Bayesian Energy Landscape Tilting: Towards Concordant Models of Molecular Ensembles

Vijay S. Pande, Rhiju Das, Kyle A. Beauchamp, 2014 .

Why Can’t We Predict RNA Structure At Atomic Resolution?

Rhiju Das, Parin Sripakdeevong, Kyle A. Beauchamp, 2011, 1103.3032.

Inferring Structural Ensembles from Noisy Experiments and Molecular Dynamics: Correcting Force Field Bias with Bayesian Energy Landscape Tilting

Vijay S. Pande, Rhiju Das, Kyle A. Beauchamp, 2014 .

Advances, Interactions, and Future Developments in the CNS, Phenix, and Rosetta Structural Biology Software Systems Annual Review of Biophysics

Randy J. Read, Paul D. Adams, David Baker, 2012 .

Advances, interactions, and future developments in the CNS, Phenix, and Rosetta structural biology software systems.

David Baker, Randy J Read, Frank DiMaio, 2013, Annual review of biophysics.

Structure prediction for CASP8 with all‐atom refinement using Rosetta

Oliver F. Lange, David Kim, Nick V Grishin, 2009, Proteins.

Macromolecular modeling with rosetta.

David Baker, Rhiju Das, D. Baker, 2008, Annual review of biochemistry.