D. Shenfeld

Single-Cell Trajectory Detection Uncovers Progression and Regulatory Coordination in Human B Cell Development

Sean C. Bendall, Tiffany J. Chen, Daniel K. Shenfeld, 2014, Cell.

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

Sean C. Bendall, Daniel K. Shenfeld, Erin F. Simonds, 2013, Nature Biotechnology.

Minimizing thermodynamic length to select intermediate states for free-energy calculations and replica-exchange simulations.

Michael P Eastwood, Ron O Dror, Huafeng Xu, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

Quantum Cohomology of Hypertoric Varieties

Daniel K. Shenfeld, D. Shenfeld, M. McBreen, 2012, 1212.4449.