H. Benyamini

发表

Multiple structural alignment by secondary structures: Algorithm and applications

H. Wolfson, R. Nussinov, O. Dror, 2003, Protein science : a publication of the Protein Society.

Prediction of multimolecular assemblies by multiple docking.

H. Wolfson, R. Nussinov, H. Benyamini, 2005, Journal of molecular biology.

Triangular correlation (TrC) between cancer aggressiveness, cell uptake capability, and cell deformability

H. Benyamini, Y. Buganim, T. Kaplan, 2020, Science Advances.

β2-Microglobulin amyloidosis: Insights from conservation analysis and fibril modelling by protein docking techniques

H. Wolfson, R. Nussinov, H. Benyamini, 2003 .

Formation and characterization of stable human serum albumin-tris-malonic acid [C60]fullerene complex.

H. Benyamini, D. Huppert, A. Kotlyar, 2005, Bioconjugate chemistry.

The ASPP interaction network: electrostatic differentiation between pro‐ and anti‐apoptotic proteins

H. Benyamini, A. Friedler, 2011, Journal of molecular recognition : JMR.

A model for the interaction between NF‐kappa‐B and ASPP2 suggests an I‐kappa‐B‐like binding mechanism

H. Benyamini, I. Arkin, A. Friedler, 2009, Proteins.

Conservation and amyloid formation: A study of the gelsolin‐like family

H. Wolfson, R. Nussinov, H. Benyamini, 2003, Proteins.

Hepatic adropin is regulated by estrogen and contributes to adverse metabolic phenotypes in ovariectomized mice

H. Benyamini, J. Tam, R. Dresner-Pollak, 2022, Molecular metabolism.

Single‐cell transcriptomics reveals a senescence‐associated IL‐6/CCR6 axis driving radiodermatitis

H. Benyamini, S. Rose-John, Inbar Plaschkes, 2022, EMBO molecular medicine.

Upregulation of Hallmark Muscle Genes Protects GneM743T/M743T Mutated Knock-In Mice From Kidney and Muscle Phenotype

H. Benyamini, S. Mitrani‐Rosenbaum, Z. Argov, 2020, Journal of neuromuscular diseases.

Combined hepatocellular-cholangiocarcinoma derives from liver progenitor cells and depends on senescence and IL6 trans-signaling.

H. Benyamini, K. Kaestner, T. Roskams, 2022, Journal of hepatology.

P450 oxidoreductase regulates barrier maturation by mediating retinoic acid metabolism in a model of the human BBB

H. Benyamini, Inbar Plaschkes, S. Anzi, 2022, Stem cell reports.

Senolytic elimination of Cox2-expressing senescent cells inhibits the growth of premalignant pancreatic lesions

H. Benyamini, Y. Dor, Oren Parnas, 2021, Gut.

Modeling sex differences in humans using isogenic induced pluripotent stem cells

H. Benyamini, I. Waldhorn, B. Reubinoff, 2022, Stem cell reports.

Chronic Intermittent Hypoxia during Sleep Causes Browning of Interscapular Adipose Tissue Accompanied by Local Insulin Resistance in Mice

H. Benyamini, D. Gozal, Inbar Plaschkes, 2022, International journal of molecular sciences.

Peptides that bind the HIV‐1 integrase and modulate its enzymatic activity – kinetic studies and mode of action

H. Benyamini, A. Friedler, A. Loyter, 2011, The FEBS journal.

A structural model of the HIV-1 Rev-integrase complex: the molecular basis of integrase regulation by Rev.

H. Benyamini, A. Friedler, A. Loyter, 2011, Biochemical and biophysical research communications.

Using peptides to study protein-protein interactions.

Hadar Benyamini, H. Benyamini, A. Friedler, 2010, Future medicinal chemistry.

Long Noncoding RNA MALAT1 Promotes Hepatocellular Carcinoma Development by SRSF1 Upregulation and mTOR Activation.

H. Benyamini, K. Prasanth, R. Karni, 2017, Cancer research.

MASS: multiple structural alignment by secondary structures

Ruth Nussinov, Haim J. Wolfson, Hadar Benyamini, 2003, ISMB.

The STIL protein contains intrinsically disordered regions that mediate its protein-protein interactions.

H. Benyamini, A. Friedler, S. Izraeli, 2014, Chemical communications.

Genome-Scale Networks Link Neurodegenerative Disease Genes to α-Synuclein through Specific Molecular Pathways.

Bonnie Berger, Ernest Fraenkel, Marc Vidal, 2017, Cell systems.

Molecular basis of the interaction between the antiapoptotic Bcl-2 family proteins and the proapoptotic protein ASPP2

H. Benyamini, S. Rüdiger, A. Friedler, 2008, Proceedings of the National Academy of Sciences.

Early age decline in DNA repair capacity in the liver: in depth profile of differential gene expression

H. Benyamini, E. Galun, Anat Geiger-Maor, 2016, Aging.

The Structure and Interactions of the Proline-rich Domain of ASPP2*

H. Benyamini, D. Veprintsev, S. Rüdiger, 2008, Journal of Biological Chemistry.

Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies

Ruth Nussinov, Yuval Inbar, Hadar Benyamini, 2005, Physical biology.

Empty SV40 capsids increase survival of septic rats by eliciting numerous host signaling networks that participate in a number of systemic functions

H. Benyamini, A. Oppenheim, A. Eden, 2020, Oncotarget.

Cyclic peptide inhibitors of HIV-1 integrase derived from the LEDGF/p75 protein.

H. Benyamini, A. Friedler, Michal Maes, 2010, Bioorganic & medicinal chemistry.

Replicative Stress Coincides with Impaired Nuclear DNA Damage Response in COX4-1 Deficiency

H. Benyamini, Ann Saada, Liza Douiev, 2022, International journal of molecular sciences.

Taking geometry to its edge: Fast unbound rigid (and hinge‐bent) docking

Ruth Nussinov, Yuval Inbar, Nurit Haspel, 2003, Proteins.

Fibril modelling by sequence and structure conservation analysis combined with protein docking techniques: beta(2)-microglobulin amyloidosis.

H. Wolfson, R. Nussinov, H. Benyamini, 2005, Biochimica et biophysica acta.

Structure–activity relationship studies using peptide arrays: the example of HIV-1 Rev–integrase interaction

H. Benyamini, A. Friedler, R. Gabizon, 2013 .

Upregulation of COX4-2 via HIF-1α in Mitochondrial COX4-1 Deficiency

H. Benyamini, Ann Saada, Liza Douiev, 2021, Cells.

Protein structure prediction via combinatorial assembly of sub-structural units

Ruth Nussinov, Yuval Inbar, Haim J. Wolfson, 2003, ISMB.

UMSBP2 is chromatin remodeler that functions in regulation of gene expression and suppression of antigenic variation in trypanosomes

H. Benyamini, A. Soni, Inbar Plaschkes, 2023, Nucleic acids research.

Hindbrain boundaries as niches of neural progenitor/stem cells regulated by the extracellular matrix proteoglycan chondroitin sulphate

H. Benyamini, D. Sela-Donenfeld, E. Muir, 2023, bioRxiv.

Mesenchymal Stem Cell-Derived Extracellular Vesicles as Proposed Therapy in a Rat Model of Cerebral Small Vessel Disease

H. Benyamini, D. Offen, M. Pasmanik-Chor, 2022, International journal of molecular sciences.

Amyloidogenic light chains impair plasma cell survival

H. Benyamini, J. Bar-Tana, G. Merlini, 2023, Haematologica.

Interaction of c(60)-fullerene and carboxyfullerene with proteins: docking and binding site alignment.

Alexandra Shulman-Peleg, Hadar Benyamini, Haim J Wolfson, 2006, Bioconjugate chemistry.

The C-terminal domain of the HIV-1 Vif protein is natively unfolded in its unbound state.

H. Benyamini, A. Friedler, M. Lebendiker, 2009, Protein engineering, design & selection : PEDS.

AN1284 attenuates steatosis, lipogenesis, and fibrosis in mice with pre-existing non-alcoholic steatohepatitis and directly affects aryl hydrocarbon receptor in a hepatic cell line

H. Benyamini, R. Abramovitch, M. Weinstock, 2023, Frontiers in endocrinology.

Genome-Scale Networks Link Neurodegenerative Disease Genes to α-Synuclein through Specific Molecular Pathways.

Neville E. Sanjana, Bryan-Joseph San Luis, B. Berger, 2017, Cell systems.

Peptides that bind the HIV‐1 integrase and modulate its enzymatic activity – kinetic studies and mode of action

H. Benyamini, A. Friedler, A. Loyter, 2011, The FEBS journal.

Cyclic peptide inhibitors of HIV-1 integrase derived from the LEDGF/p75 protein.

H. Benyamini, A. Friedler, Michal Maes, 2010, Bioorganic & medicinal chemistry.

Mesenchymal Stromal Cell-Derived Small Extracellular Vesicles Modulate Apoptosis, TNF Alpha and Interferon Gamma Response Gene mRNA Expression in T Lymphocytes

H. Benyamini, A. Buxboim, S. Elgavish, 2023, International journal of molecular sciences.