Matthew Boitano

发表

Resolving the complexity of the human genome using single-molecule sequencing

Mark J. P. Chaisson, Peter H. Sudmant, E. Eichler, 2014, Nature.

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

R. Durbin, E. Eichler, R. Wilson, 2016, bioRxiv.

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

Richard J. Roberts, Jonas Korlach, Tyson A. Clark, 2011, Nucleic acids research.

Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding

Alan Christoffels, Simon Moxon, Junhui Jiang, 2016, PLoS genetics.

Discovery and genotyping of structural variation from long-read haploid genome sequence data

Jonas Korlach, Zev N. Kronenberg, Mark J. P. Chaisson, 2017, Genome research.

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

R. Durbin, R. Wilson, T. Hubbard, 2016, bioRxiv.

The methylomes of six bacteria

Richard J. Roberts, Stephen W. Turner, Jonas Korlach, 2012, Nucleic acids research.

Methylomic and phenotypic analysis of the ModH5 phasevarion of Helicobacter pylori

Tyson A. Clark, J. Korlach, Matthew Boitano, 2017, Scientific Reports.

A biphasic epigenetic switch controls immunoevasion, virulence and niche adaptation in non-typeable Haemophilus influenzae

Tyson A. Clark, J. Korlach, Matthew Boitano, 2015, Nature Communications.

Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle

Tyson A. Clark, S. Turner, J. Korlach, 2013, Proceedings of the National Academy of Sciences.

Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

J. Korlach, Matthew Boitano, J. Leadbetter, 2015, Genome Announcements.

Complete Genome Sequence of Streptomyces sp. Strain CCM_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts

J. Korlach, Matthew Boitano, J. Leadbetter, 2015, Genome Announcements.

Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae

Jonas Korlach, David K. Henderson, James C. Mullikin, 2014, Science Translational Medicine.

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

Zixin Deng, Jonas Korlach, Vincent L. Butty, 2014, Nature Communications.

Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica Serovars

Tyson A. Clark, J. Korlach, Matthew Boitano, 2015, PloS one.

griffith . edu . au Specificity of the ModA 11 , ModA 12 and ModD 1 epigenetic regulator N 6-adenine DNA methyltransferases of Neisseria meningitidis

Tyson A. Clark, J. Korlach, Matthew Boitano, 2017 .

Specificity of the ModA11, ModA12 and ModD1 epigenetic regulator N6-adenine DNA methyltransferases of Neisseria meningitidis

Tyson A. Clark, J. Korlach, Matthew Boitano, 2015, Nucleic acids research.

Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation

Tyson A. Clark, S. Turner, J. Korlach, 2013, BMC Biology.

Defining the sequence requirements for the positioning of base J in DNA using SMRT sequencing

Tyson A. Clark, J. Korlach, Matthew Boitano, 2015, Nucleic acids research.

A comparative analysis of methylome profiles of Campylobacter jejuni sheep abortion isolate and gastroenteric strains using PacBio data

Paul J. Plummer, Tyson A. Clark, Andrew J. Severin, 2015, Front. Microbiol..

A random six-phase switch regulates pneumococcal virulence via global epigenetic changes

Alexander N Gorban, Tyson A. Clark, J. Korlach, 2014, Nature Communications.

SMRT-Cappable-seq reveals complex operon variants in bacteria

Tyson A. Clark, Matthew Boitano, L. Ettwiller, 2018, Nature Communications.

Correction: Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding

Lawrence S. Hon, Tyler H. Garvin, M. Schatz, 2016, PLoS genetics.

Whole-Genome Assembly of Klebsiella pneumoniae Coproducing NDM-1 and OXA-232 Carbapenemases Using Single-Molecule, Real-Time Sequencing

Tyson A. Clark, J. Korlach, Matthew Boitano, 2014, Antimicrobial Agents and Chemotherapy.

Methylomic and phenotypic analysis of the ModH5 phasevarion of Helicobacter pylori

Tyson A. Clark, J. Korlach, Matthew Boitano, 2017, Scientific Reports.

ModM DNA methyltransferase methylome analysis reveals a potential role for Moraxella catarrhalis phasevarions in otitis media

Tyson A. Clark, J. Korlach, Matthew Boitano, 2014, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Complete Genome Sequence of Moraxella catarrhalis Strain CCRI-195ME, Isolated from the Middle Ear

Tyson A. Clark, J. Korlach, Matthew Boitano, 2017, Genome Announcements.

Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data.

Jonas Korlach, Mark J. P. Chaisson, Laura Vives, 2018, Genome research.

Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding

Lawrence S. Hon, Tyler H. Garvin, M. Schatz, 2016, PLoS genetics.

Correction: Chromosomal-Level Assembly of the Asian Seabass Genome Using Long Sequence Reads and Multi-layered Scaffolding

Lawrence S. Hon, Tyler H. Garvin, M. Schatz, 2016, PLoS genetics.