S. Koren
发表
Timothy P. L. Smith,
S. Koren,
G. Harhay,
2013,
Genome Biology.
S. Koren,
A. Phillippy,
B. Walenz,
2020,
Genome Biology.
Timothy P. L. Smith,
Fergal J. Martin,
A. Pang,
2020,
Nature Communications.
Brian D. Ondov,
S. Koren,
N. Bergman,
2015,
Genome Biology.
J. Landolin,
S. Koren,
A. Phillippy,
2014
.
S. Koren,
G. Sutton,
J. Miller,
2010,
Genomics.
M. Schatz,
S. Salzberg,
S. Koren,
2008
.
Nuno A. Fonseca,
Shaun D. Jackman,
David R. Kelley,
2011,
Genome research.
Katherine H. Huang,
Daniel D. Sommer,
Zhengyuan O. Wang,
2012,
Nature.
R. Durbin,
E. Eichler,
R. Wilson,
2016,
bioRxiv.
Daniel D. Sommer,
Brian D. Ondov,
S. Koren,
2013,
Genome Biology.
Timothy P. L. Smith,
Zev N. Kronenberg,
Fergal J. Martin,
2019,
bioRxiv.
S. Koren,
A. Phillippy,
Sergey Koren,
2015,
Current opinion in microbiology.
Katherine H. Huang,
Daniel D. Sommer,
Zhengyuan O. Wang,
2012,
Nature.
S. Koren,
N. Bergman,
A. Phillippy,
2016,
bioRxiv.
Brian D. Ondov,
S. Koren,
A. Phillippy,
2014,
Genome Biology.
Florent E. Angly,
Daniel D. Sommer,
S. Koren,
2011,
Current protocols in bioinformatics.
J. Landolin,
S. Koren,
A. Phillippy,
2014,
Nature Biotechnology.
S. Koren,
A. Phillippy,
I. Antoshechkin,
2020,
Genome Biology.
S. Koren,
A. Phillippy,
I. Antoshechkin,
2020,
Genome Biology.
S. Koren,
J. Quick,
B. Paten,
2017,
bioRxiv.
Brent S. Pedersen,
Ian T. Fiddes,
Karen H. Miga,
2017,
Nature Biotechnology.
Timothy P. L. Smith,
S. Koren,
A. Phillippy,
2016,
Immunogenetics.
James R. Knight,
M. Schatz,
S. Koren,
2014,
GigaScience.
Steven G. Schroeder,
Timothy P. L. Smith,
Maitreya J. Dunham,
2017,
Nature Genetics.
S. Koren,
M. Pop,
C. Chin,
2016,
BMC Genomics.
Daniel D. Sommer,
S. Koren,
M. Pop,
2013,
BMC Research Notes.
Matthew W. Hahn,
Robert M. Waterhouse,
Simo V. Zhang,
2020,
BMC Biology.
Timothy P. L. Smith,
S. Koren,
A. Phillippy,
2016
.
David A. Eccles,
S. Koren,
B. Henrissat,
2018,
BMC Biology.
Ryan M. Layer,
Nathan D. Olson,
Nancy F. Hansen,
2021,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Konstantin Berlin,
2016,
bioRxiv.
Sergey Koren,
S. Koren,
2015
.
Sergey Koren,
Armin Töpfer,
Tobias Marschall,
2019,
Nature Biotechnology.
Mitchell R. Vollger,
Glennis A. Logsdon,
Karen H. Miga,
2020,
bioRxiv.
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Sergey Koren,
David Haussler,
Joel Armstrong,
2020,
Nature Biotechnology.
Sergey Koren,
Guillaume Marçais,
Steven L Salzberg,
2016
.
Sergey Koren,
Ulrich Schurr,
Jean-Marc Aury,
2017,
Plant Cell.
Sergey Koren,
Adam M Phillippy,
Daniel J. Nasko,
2018,
Genome Biology.
Timothy P. L. Smith,
J. Shendure,
S. Koren,
2016,
bioRxiv.
Mitchell R. Vollger,
Glennis A. Logsdon,
Karen H. Miga,
2020,
Nature.
Sergey Koren,
Adam M. Phillippy,
Joel Armstrong,
2019,
bioRxiv.
William T. Harvey,
Mitchell R. Vollger,
Glennis A. Logsdon,
2020,
Nature.
Brian D. Ondov,
S. Koren,
A. Phillippy,
2014
.
Brian D. Ondov,
S. Koren,
A. Phillippy,
2014,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Eugene W. Myers,
2020,
Nature.
Shane A. McCarthy,
R. Durbin,
E. Myers,
2020,
bioRxiv.
Sergey Koren,
Thomas Mailund,
Asger Hobolth,
2012,
Nature.
R. Durbin,
R. Wilson,
T. Hubbard,
2016,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Sergey Nurk,
2020,
bioRxiv.
Sergey Koren,
Alexander T. Dilthey,
Adam M. Phillippy,
2018,
bioRxiv.
S. Koren,
M. Pop,
Mathieu Almeida,
2017,
bioRxiv.
Matthew W. Hahn,
Simo V. Zhang,
S. Koren,
2018,
BMC Biology.
Sergey Koren,
Adam M. Phillippy,
Armin Töpfer,
2019,
bioRxiv.
S. Koren,
A. Phillippy,
B. Langmead,
2022,
bioRxiv.
S. Koren,
A. Phillippy,
T. Wolfsberg,
2019,
Science Advances.
S. Koren,
A. Phillippy,
T. Wolfsberg,
2018,
Science Advances.
Timothy P. L. Smith,
Bronwen L. Aken,
Ariel S. Schwartz,
2020,
GigaScience.
Steven G. Schroeder,
Timothy P. L. Smith,
S. Koren,
2020,
GigaScience.
Sergey Koren,
Tanja Woyke,
Haiwei Luo,
2015,
The ISME Journal.
Timothy P. L. Smith,
S. Koren,
A. Phillippy,
2019,
BMC Genomics.
S. Koren,
A. Phillippy,
A. Baxevanis,
2022,
bioRxiv.
Robert M. Waterhouse,
Gloria I. Giraldo-Calderón,
Daniel R. Caffrey,
2016,
Nature Communications.
Eric P. Skaar,
S. Koren,
R. Kolter,
2018,
Proceedings of the National Academy of Sciences.
S. Koren,
G. Vacek,
B. Hornung,
2013
.
S. Koren,
M. Pop,
T. Treangen,
2016,
PloS one.
James B. Munro,
Zalak V. Shah,
Joana C. Silva,
2020,
Genome medicine.
S. Koren,
A. Phillippy,
J. Ghurye,
2019,
GigaScience.
James B. Munro,
Zalak V. Shah,
Joana C. Silva,
2019,
Genome Medicine.
S. Koren,
A. Phillippy,
J. Ghurye,
2018,
bioRxiv.
Marie E. Bolger,
Anthony M. Bolger,
Alisandra K. Denton,
2020
.
Bradd J. Haley,
Timothy P. L. Smith,
S. Koren,
2018,
Genome Biology.
S. Koren,
A. Phillippy,
M. Pop,
2014
.
S. Koren,
T. Inglis,
P. Chain,
2015,
Genome Announcements.
S. Koren,
M. Pop,
T. Treangen,
2011,
Genome Biology.
S. Koren,
M. Pop,
T. Treangen,
2011,
Genome Biology.
Timothy P. L. Smith,
Nicholas W. Maurer,
S. Koren,
2020,
GigaScience.
Timothy P. L. Smith,
Nicholas W. Maurer,
S. Koren,
2019,
bioRxiv.
Steven G. Schroeder,
Timothy P. L. Smith,
Bronwen L. Aken,
2019,
bioRxiv.
Timothy P. L. Smith,
S. Koren,
C. Elsik,
2018
.
Timothy P. L. Smith,
S. Koren,
A. Phillippy,
2019,
BMC Genomics.
S. Koren,
A. Phillippy,
V. Colonna,
2023,
bioRxiv.
Narmada,
Tulin,
Sheila,
2020
.
Ira M. Hall,
Nathan D. Olson,
Mark J. P. Chaisson,
2022,
bioRxiv.
Glennis A. Logsdon,
E. Eichler,
S. Koren,
2022,
bioRxiv.
Ryan M. Layer,
Nathan D. Olson,
Nancy F. Hansen,
2021
.
Lauren A. Assour,
Simo V. Zhang,
S. Koren,
2016,
Proceedings of the National Academy of Sciences.
Aaron M. Streets,
Travis J. Wheeler,
Mitchell R. Vollger,
2021,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Li Zhao,
2018,
Nature.
Mitchell R. Vollger,
Glennis A. Logsdon,
Karen H. Miga,
2021,
bioRxiv.
William T. Harvey,
Mitchell R. Vollger,
Karen H. Miga,
2021,
bioRxiv.
William T. Harvey,
Rupesh K. Kesharwani,
Mitchell R. Vollger,
2022,
bioRxiv.
Aaron M. Streets,
Ira M. Hall,
Nathan D. Olson,
2021,
bioRxiv.
Chirag Jain,
Alexander T. Dilthey,
Adam M. Phillippy,
2019,
Nature Communications.
Monica F. Poelchau,
S. Koren,
J. Johnston,
2022,
Genes.
Eric P. Skaar,
S. Koren,
R. Kolter,
2018,
bioRxiv.
S. Koren,
A. Phillippy,
Zhanjiang Liu,
2016,
Nature Communications.
Sergey Koren,
Adam M. Phillippy,
Todd J. Treangen,
2018,
bioRxiv.
Srinivas Aluru,
Sergey Koren,
Chirag Jain,
2017,
bioRxiv.
Brian D. Ondov,
S. Koren,
A. Phillippy,
2014,
Genome Biology.
Sergey Koren,
Jason R. Miller,
Granger G. Sutton,
2008,
Bioinform..
Sergey Koren,
Todd J. Treangen,
Jonathan E. Allen,
2017,
Genome Announcements.
S. Koren,
A. Phillippy,
G. Fox,
2017
.
Brian D. Ondov,
S. Koren,
A. Phillippy,
2014,
Genome Biology.
Sergey Koren,
Adam M. Phillippy,
Mihai Pop,
2014,
BMC Bioinformatics.
M. Schatz,
S. Koren,
A. Phillippy,
2012,
Nature Biotechnology.
S. Koren,
A. Phillippy,
W. Chow,
2021,
Nature.
Ken Chen,
Adam M. Phillippy,
Iman Hajirasouliha,
2020,
Nature Biotechnology.
Knut Reinert,
David Weese,
Gennady Denisov,
2009,
Bioinform..
Sergey Koren,
Li Zhao,
Sanjit S. Batra,
2017,
bioRxiv.
Timothy B. Stockwell,
S. Koren,
N. Bergman,
2017,
bioRxiv.
S. Koren,
A. Phillippy,
B. Walenz,
2022,
Nature Methods.
E. Myers,
S. Koren,
A. Phillippy,
2021,
bioRxiv.
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Colleen M. Bosworth,
Mitchell R. Vollger,
Karen H. Miga,
2020,
Nature Biotechnology.
Adam M. Phillippy,
David Haussler,
Joel Armstrong,
2019,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Iman Hajirasouliha,
2019,
bioRxiv.
Nathan D. Olson,
Ian T. Fiddes,
Ryan E. Mills,
2022
.
Nancy F. Hansen,
S. Koren,
A. Phillippy,
2022,
Nature Methods.
Sergey Koren,
Adam M. Phillippy,
Chirag Jain,
2020,
bioRxiv.
S. Koren,
A. Phillippy,
T. Read,
2019,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Timothy P. L. Smith,
2019
.
Sergey Koren,
Adam M Phillippy,
Matthew Loose,
2019,
Nature Biotechnology.
Sergey Koren,
Adam M Phillippy,
Arang Rhie,
2018,
Nature Biotechnology.
Brian D. Ondov,
S. Koren,
N. Bergman,
2014,
Genome Announcements.
S. Koren,
M. Pop,
C. Chin,
2016,
bioRxiv.
Inanç Birol,
Dominique Lavenier,
Hamidreza Chitsaz,
2013,
GigaScience.
Chirag Jain,
Srinivas Aluru,
Sergey Koren,
2018,
bioRxiv.
Sergey Koren,
Mihai Pop,
Todd J. Treangen,
2011,
Bioinform..
Sergey Koren,
Mihai Pop,
Adam M Phillippy,
2018,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Cedric Chauve,
2018,
bioRxiv.
Sergey Koren,
Adam M. Phillippy,
Arang Rhie,
2020,
bioRxiv.
Sergey Koren,
Mihai Pop,
Jay Ghurye,
2019,
Briefings Bioinform..
Sergey Koren,
Vladimir Larionov,
Adam M Phillippy,
2018,
Nucleic acids research.
S. Koren,
N. Bergman,
A. Phillippy,
2017,
bioRxiv.
Daniel J. Nasko,
S. Koren,
A. Phillippy,
2018,
Genome Biology.
Sergey Koren,
Adam M. Phillippy,
Aleksandra Kostic,
2019,
Genome Biology.
Daniel D. Sommer,
S. Koren,
M. Pop,
2011,
Genome Biology.
S. Koren,
A. Phillippy,
A. Dilthey,
2019,
Nature Communications.
Chirag Jain,
Sergey Koren,
Alexander T. Dilthey,
2018,
bioRxiv.
Arun S. Seetharam,
David E. Hufnagel,
Amanda M. Gilbert,
2019,
bioRxiv.
S. Koren,
G. Sutton,
T. Stockwell,
2018,
F1000Research.
Glennis A. Logsdon,
Karen H. Miga,
S. Koren,
2021,
Nature Methods.
S. Koren,
R. Stepanauskas,
B. Swan,
2017,
The ISME Journal.
Jordan M. Eizenga,
Karen H. Miga,
Hugh E. Olsen,
2023,
bioRxiv.
Daryl M. Gohl,
S. Koren,
K. Beckman,
2019,
bioRxiv.
Sergey Koren,
Mihai Pop,
Howard Huang,
2013,
2013 IEEE International Conference on Bioinformatics and Biomedicine.
Sergey Koren,
S. Koren,
2012
.
Erez Lieberman Aiden,
Matthew J. Fuxjager,
Alexander N. G. Kirschel,
2021,
Genome Biology.
M. Schatz,
S. Koren,
A. Phillippy,
2022
.
M. Schatz,
S. Salzberg,
S. Koren,
2010
.
S. Koren,
2009
.
Sergey Koren,
Gil McVean,
Adam M Phillippy,
2019,
Bioinform..
S. Koren,
A. Phillippy,
J. McGrath,
2020,
bioRxiv.
S. Koren,
A. Phillippy,
V. Colonna,
2023,
bioRxiv.
S. Koren,
A. Phillippy,
D. Bickhart,
2016,
bioRxiv.
Adam M. Phillippy,
Gil McVean,
Alexander Dilthey,
2018,
bioRxiv.
Glennis A. Logsdon,
E. Eichler,
S. Koren,
2023,
Nature Biotechnology.
Ian T. Fiddes,
Jay M. Sage,
Michael D. Kaiser,
2020,
Nature Biotechnology.
Chirag Jain,
Adam M. Phillippy,
Haowen Zhang,
2020,
bioRxiv.
Ian T. Fiddes,
Jay M. Sage,
Michael D. Kaiser,
2020,
Nature Biotechnology.
A. T. Dossey,
S. Koren,
M. Lorenzen,
2022,
bioRxiv.
S. Koren,
G. Harhay,
J. Bono,
2014,
Genome Announcements.
Zev N. Kronenberg,
E. Eichler,
S. Koren,
2021,
Nature Communications.
Alexander Sczyrba,
Sergey Koren,
Tanja Woyke,
2014,
PloS one.
S. Koren,
A. Phillippy,
Zhanjiang Liu,
2023,
BMC Biology.
A. T. Dossey,
S. Koren,
M. Lorenzen,
2023,
Biomolecules.
Daryl M. Gohl,
S. Koren,
K. Beckman,
2021,
G3.
Complete Closed Genome Sequences of Mannheimia haemolytica Serotypes A1 and A6, Isolated from Cattle
D. S. McVey,
S. Koren,
G. Harhay,
2013,
Genome Announcements.
William T. Harvey,
Hanlee P. Ji,
Omar E. Cornejo,
2023,
Nature.
Nathan D. Olson,
M. DePristo,
M. Schatz,
2019,
Nature Biotechnology.
S. Salzberg,
S. Koren,
J. Yorke,
2016,
bioRxiv.
Bronwen L. Aken,
Ariel S. Schwartz,
Osagie G. Izuogu,
2018,
GigaScience.
Bronwen L. Aken,
Ariel S. Schwartz,
Osagie G. Izuogu,
2019,
bioRxiv.
S. Salzberg,
S. Koren,
A. Zimin,
2017,
Genome research.
Zev N. Kronenberg,
Fergal J. Martin,
A. Pang,
2020,
Nature Communications.
Eric P. Nawrocki,
Sofia N. Barreira,
S. Koren,
2023,
bioRxiv.
William T. Harvey,
Nathan D. Olson,
Nancy F. Hansen,
2023,
bioRxiv.
Glennis A. Logsdon,
E. Eichler,
S. Koren,
2023,
bioRxiv.
S. Koren,
Á. Miklósi,
A. Rhie,
2023,
bioRxiv.
Timothy B. Stockwell,
S. Koren,
G. Sutton,
2018,
F1000Research.
David A. Eccles,
S. Koren,
M. Camberis,
2017,
bioRxiv.
Jonathan E. Allen,
S. Koren,
N. Bergman,
2017,
Genome Announcements.
Corrigendum: Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
Sergey Koren,
Adam M Phillippy,
Konstantin Berlin,
2015,
Nature Biotechnology.
Ira M. Hall,
Nathan D. Olson,
Mark J. P. Chaisson,
2022,
Nature.
Steven G. Schroeder,
Bronwen L. Aken,
Osagie G. Izuogu,
2022
.
James A. Yorke,
Aleksey V. Zimin,
Tingting Zhu,
2016,
bioRxiv.
S. Koren,
A. Phillippy,
N. Loman,
2019,
Nature Biotechnology.
A. T. Dossey,
S. Koren,
B. Oppert,
2023,
Genes.
S. Koren,
S. Kingan,
A. Wallberg,
2018
.
S. Salzberg,
S. Koren,
A. Phillippy,
2012,
Genome research.
Sofia N. Barreira,
S. Koren,
A. Phillippy,
2024,
Genome research.
S. Koren,
Haoyu Cheng,
Heng Li,
2023,
arXiv.org.
J. Landolin,
S. Koren,
A. Phillippy,
2014,
Nature Biotechnology.
Zev N. Kronenberg,
E. Eichler,
S. Koren,
2019
.
Brian D. Ondov,
S. Koren,
N. Bergman,
2015
.
Karen H. Miga,
S. Koren,
A. Phillippy,
2024,
bioRxiv.
Glennis A. Logsdon,
S. Koren,
A. Phillippy,
2024,
Nature.
Marie E. Bolger,
Anthony M. Bolger,
Alisandra K. Denton,
2017,
Plant Cell.
Florent E. Angly,
Daniel D. Sommer,
S. Koren,
2011,
Current protocols in bioinformatics.
Zachary A. Szpiech,
Kelly M. McGarvey,
Melissa A. Wilson,
2024,
Nature.