D. Bates

发表

Mixed-effects modeling with crossed random effects for subjects and items

R. Baayen, D. Davidson, D. Bates, 2008 .

Accounting for Intrinsic Nonlinearity in Nonlinear Regression Parameter Inference Regions

D. G. Watts, D. Bates, D. Hamilton, 1982 .

Mixed-Effects Models in S and S-PLUS

D. Bates, Josae C. Pinheiro, 2001 .

Fitting Linear Mixed-Effects Models Using lme4

D. Bates, S. Walker, M. Machler, 2014, 1406.5823.

The Derivative of |X′X| and Its Uses

D. Bates, 1983 .

Calculation of intrinsic and parameter-effects curvatures for nonlinear regression models

D. G. Watts, D. Bates, D. Hamilton, 1983 .

The Derivative of IX'XI and Its Uses

D. Bates, 1983 .

Parameter Transformations for Improved Approximate Confidence Regions in Nonlinear Least Squares

D. G. Watts, D. Bates, 1981 .

Relative Curvature Measures of Nonlinearity

D. G. Watts, D. Bates, 1980 .

Gcvpack – routines for generalized cross validation

G. Wahba, B. Yandell, D. Bates, 1987 .

Approximations to the Log-Likelihood Function in the Nonlinear Mixed-Effects Model

D. Bates, J. Pinheiro, 1995 .

Nonlinear mixed effects models for repeated measures data.

D. Bates, M. Lindstrom, M. Lindstrom, 1990, Biometrics.

Bioconductor: open software development for computational biology and bioinformatics

Jean YH Yang, K. Hornik, L. Tierney, 2004, Genome Biology.

Linear Mixed-Effects Models using 'Eigen' and S4

D. Bates, S. Walker, B. Bolker, 2015 .

fitting linear mixed effects models using lme 4 arxiv

D. Bates, S. Walker, B. Bolker, 2014 .

Computational Methods for Multilevel Modelling

D. Bates, J. Pinheiro, 1998 .

Unconstrained parametrizations for variance-covariance matrices

Douglas M. Bates, José C. Pinheiro, D. Bates, 1996, Stat. Comput..

The computation of generalized cross-validation functions through householder tridiagonalization with applications to the fitting of interaction spline models

G. Wahba, D. Bates, Chong Gu, 1989 .

Parsimonious Mixed Models

D. Bates, R. Kliegl, H. Baayen, 2015, 1506.04967.

Linear mixed models and penalized least squares

Douglas M. Bates, Saikat DebRoy, D. Bates, 2004 .

Output Analysis and Diagnostics for MCMC

D. Bates, M. Plummer, N. Best, 2015 .

Balancing Type I Error and Power in Linear Mixed Models

D. Bates, R. Kliegl, H. Baayen, 2015, 1511.01864.

Nonlinear Regression: Iterative Estimation and Linear Approximations

D. G. Watts, D. Bates, 2008 .

Getting better contour plots with S and GCVPACK

G. Wahba, D. Bates, F. M. Reames, 1993 .

OpenMendel: a cooperative programming project for statistical genetics

Kevin L. Keys, Jin J Zhou, Benjamin B. Chu, 2019, Human Genetics.

Model Building for Nonlinear Mixed Effects Models

D. Bates, M. Lindstrom, J. Pinheiro, 2007 .

Nonlinear Regression‐Introduction

D. G. Watts, D. Bates, 2014 .

Penalized least squares versus generalized least squares representations of linear mixed models

D. Bates, 2014 .

Comparison of alternative diphasic lactation curve models under bovine somatotropin administration.

D. Bates, K. Weigel, B. Craig, 1992, Journal of dairy science.

THE R ENVIRONMENT FOR STATISTICAL COMPUTING

Kurt Hornik, Brian D. Ripley, Robert Gentleman, 2001 .

The 2.14 release of the R statistical language.

Simon Urbanek, Ross Ihaka, Stefano M. Iacus, 2011 .

Nonlinear Regression Analysis and Its Applications

D. G. Watts, D. Bates, 1988 .

Newton-Raphson and EM Algorithms for Linear Mixed-Effects Models for Repeated-Measures Data

D. Bates, M. Lindstrom, 1988 .

Dmbates/Mixedmodels.Jl: Expand `Optsummary` And Use For Passing Opt Args

Milan Bouchet-Valat, Andreas Noack, Douglas Bates, 2016 .

dmbates/MixedModels.jl: Use BlockedSparse type to reduce allocation

Patrick Kofod Mogensen, Milan Bouchet-Valat, Elliot Saba, 2017 .

Expression of interleukin-5- and granulocyte macrophage-colony-stimulating factor-responsive genes in blood and airway eosinophils.

Lin Ying Liu, D. Bates, W. Busse, 2004, American journal of respiratory cell and molecular biology.

Comparing Least Squares Calculations Douglas Bates R Development Core Team

D. Bates, 2019 .

Comparing Least Squares Calculations

D. Bates, 2004 .

Linear and Nonlinear Mixed Effects Models [R package nlme version 3.1-149]

D. Bates, J. Pinheiro, R-core, 2020 .

Nonlinear Mixed-Effects Models: Basic Concepts and Motivating Examples

Douglas M. Bates, José C. Pinheiro, D. Bates, 2000 .

Cross-Classified Models in the Context of Value-Added Modeling ∗

D. Bates, J. K. Roberts, 2009 .

fitting linear mixed effects models using lme 4 arxiv

D. Bates, S. Walker, B. Bolker, 2014 .

The car Package

Brian D. Ripley, Spencer Graves, Henric Nilsson, 2006 .

Nonlinear Regression Analysis and Its Applications

Douglas M. Bates, Donald G. Watts, D. G. Watts, 1988 .

Programming With Data: A Guide to the S Language

Douglas M. Bates, D. Bates, 1999, Technometrics.

Theory and Computational Methods for Nonlinear Mixed-Effects Models

Douglas M. Bates, José C. Pinheiro, D. Bates, 2000 .

LINEAR AND NONLINEAR MIXED-EFFECTS MODELS

Douglas M. Bates, José C. Pinheiro, R-core, 1998 .

The cave of Shadows. Addressing the human factor with generalized additive mixed models

Reinhold Kliegl, Shravan Vasishth, Harald Baayen, 2015, 1511.03120.

Technical note: an R package for fitting generalized linear mixed models in animal breeding.

D Gianola, K A Weigel, G J M Rosa, 2010, Journal of animal science.

Fast and Elegant Numerical Linear Algebra Using the RcppEigen Package

Douglas M. Bates, Dirk Eddelbuettel, D. Bates, 2013 .

Model Building for Nonlinear Mixed Effects Models

D. Bates, M. Lindstrom, J. Pinheiro, 2007 .

Loosely coupled nonlinear least squares

Douglas M. Bates, D. Bates, Yuh-Wen Soo, 1992 .

Approximate inferences in multiresponse regression analysis

Douglas M. Bates, D. Bates, Gunseog Kang, 1990 .

The Derivative of |X′X| and Its Uses@@@The Derivative of |X prime X| and Its Uses

Douglas M. Bates, D. Bates, 1983 .

Nonlinear Mixed Effects Classes And Methods For S

D. Bates, M. Lindstrom, J. Pinheiro, 2008 .

Sparse and Dense Matrix Classes and Methods [R package Matrix version 1.2-18]

Douglas M. Bates, D. Bates, M. Maechler, 2019 .

Model building in chemistry using profile t and trace plots

D. G. Watts, D. Bates, 1991 .

A multi-response gauss-newton algorithm

Douglas M. Bates, Donald G. Watts, D. G. Watts, 1984 .

A Relative Off set Orthogonality Convergence Criterion for Nonlinear least Squares

Douglas M. Bates, Donald G. Watts, D. G. Watts, 1981 .

lme4: Mixed-e↵ects modeling with R

Douglas M. Bates, D. Bates, 2010 .

Direct Methods for Sparse Linear Systems by Timothy A. Davis

Douglas M. Bates, D. Bates, 2007 .

Appendix 1. Data Sets Used in Examples