P. Spellman
发表
Michael Ruogu Zhang,
D. Botstein,
G. Sherlock,
1998,
Molecular biology of the cell.
D. Botstein,
P. Brown,
P. Spellman,
1998,
Proceedings of the National Academy of Sciences of the United States of America.
D. Botstein,
P. Brown,
P. Spellman,
2000,
Molecular biology of the cell.
Christian A. Rees,
D. Botstein,
P. Brown,
2000,
Nature Genetics.
Ajay N. Jain,
P. Spellman,
J. Fridlyand,
2006,
Cancer cell.
Joshua M. Korn,
Christopher A. Miller,
Derek Y. Chiang,
2008,
Nature.
S. Gabriel,
J. Mesirov,
R. Wilson,
2010,
Cancer cell.
Nicholas J. Wang,
P. Spellman,
M. Berger,
2009,
Neuro-oncology.
D. Botstein,
P. Brown,
P. Spellman,
2000,
Nature.
Jason E. Stewart,
C. Ball,
G. Sherlock,
2002,
Genome Biology.
C. Ball,
J. Matese,
M. Ringwald,
2004,
Environmental Health Perspectives.
Jason E. Stewart,
Irene F. Kim,
F. Holstege,
2001,
Nature Genetics.
Steven J. M. Jones,
Benjamin J. Raphael,
Evan O. Paull,
2013,
Nature.
Benjamin J. Raphael,
James M. Eldred,
Joshua M. Stuart,
2011,
Nature.
Evan O. Paull,
Joshua M. Stuart,
Chenyue W. Hu,
2016,
Nature Methods.
Steven J. M. Jones,
James A. Eddy,
David L. Gibbs,
2018,
Immunity.
Steven J. M. Jones,
Joshua M. Stuart,
Brian D. O’Connor,
2012,
Nature.
C. Ball,
J. Matese,
M. Ringwald,
2004,
PLoS biology.
Joshua M. Stuart,
Laura M. Heiser,
Nicholas J. Wang,
2011,
Proceedings of the National Academy of Sciences.
Lior Pachter,
Zhi Hu,
Bahram Parvin,
2010,
Molecular Cancer Research.
Steven J. M. Jones,
Andrew H. Beck,
Joshua F. McMichael,
2012,
Nature.
Gary D Bader,
Benjamin J. Raphael,
Joshua M. Stuart,
2010,
Nature.
P. Spellman,
D. Hanahan,
H. Feiler,
2011,
Nature Medicine.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2018,
Cell.
E. Birney,
P. Spellman,
S. Durinck,
2009,
Nature Protocols.
Steven J. M. Jones,
Christopher A. Miller,
Richard A. Moore,
2017,
Cell.
Yuan Ji,
Ville Mustonen,
Paul T. Spellman,
2018,
bioRxiv.
Benjamin J. Raphael,
Florian Markowetz,
Iñigo Martincorena,
2017,
Nature Genetics.
Yuan Ji,
Ville Mustonen,
Salem Malikic,
2018,
Molecular and Cellular Biology / Genetics.
Genee Y. Lee,
P. Spellman,
R. Neve,
2007,
Molecular oncology.
P. Spellman,
J. Gray,
J. Ireland,
2010,
Proceedings of the National Academy of Sciences.
Steven J. M. Jones,
Nuno A. Fonseca,
Icgc,
2020,
Nature.
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2009,
Cancer research.
D. Haussler,
A. McKenna,
S. Gabriel,
2013,
Cell.
Steven J. M. Jones,
Benjamin J. Raphael,
Joshua F. McMichael,
2018,
Cell.
Michael C. Heinold,
David T. W. Jones,
Timothy A Beck,
2015,
Nature Communications.
Nicholas J. Wang,
Noah E. Berlow,
Matthew N. Svalina,
2015,
Nature Medicine.
Nicholas J. Wang,
P. Spellman,
J. Gray,
2015,
PloS one.
C. Sander,
R. Gibbs,
P. Spellman,
2012,
PloS one.
Benjamin J. Raphael,
Joshua F. McMichael,
Christopher A. Miller,
2014,
Nature Communications.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2018,
Cancer cell.
Laura M. Heiser,
Nicholas J. Wang,
Oana M. Enache,
2013,
Genome Biology.
Laura M. Heiser,
Summer L. Gibbs,
P. Spellman,
2018,
Bioinformatics and Systems Biology.
Steven J. M. Jones,
Benjamin J. Raphael,
Mark D. M. Leiserson,
2016,
The New England journal of medicine.
K. Cibulskis,
S. Gabriel,
J. Mesirov,
2012,
The Journal of clinical investigation.
Sonia M Leach,
Tullia C Bruno,
Kami E Chiotti,
2016,
Proceedings of the National Academy of Sciences.
Paul T. Spellman,
Gerald M. Rubin,
Ennio De Gregorio,
2001,
Proceedings of the National Academy of Sciences of the United States of America.
Benjamin J. Raphael,
Lincoln D. Stein,
Dale W. Garsed,
2020,
Nature Communications.
Benjamin J. Raphael,
Lincoln D. Stein,
Dale W. Garsed,
2020,
Cell.
Roland Eils,
Yuan Ji,
Jan Schröder,
2020,
Nature Communications.
P. Spellman,
J. Gray,
Ju Han,
2012
.
David Haussler,
Nam Huh,
Paul T. Spellman,
2011,
Proceedings of the National Academy of Sciences.
Nigel W. Hardy,
Chris F. Taylor,
Andrew R. Jones,
2007,
Nature Biotechnology.
Wen-Lin Kuo,
Jane Fridlyand,
Terry Speed,
2006,
Cancer cell.
P. Spellman,
D. Gilbert,
E. Bouhassira,
2022,
bioRxiv.
Margaret P. Chapman,
Andrea Califano,
Mariano J. Alvarez,
2018,
Nature Communications.
Leandro A. Loss,
P. Spellman,
J. Gray,
2010
.
Joshua M. Stuart,
Adam A. Margolin,
Kristen K. Dang,
2014,
Nature Genetics.
P. Spellman,
J. Gray,
J. Gray,
2014,
Nature Medicine.
Mark D. M. Leiserson,
Ludmila V. Danilova,
P. Spellman,
2018
.
Benjamin J. Raphael,
Mark D. M. Leiserson,
Ludmila V. Danilova,
2018,
Cancer cell.
P. Spellman,
G. Fontenay,
B. Parvin,
2014
.
Laura M. Heiser,
P. Spellman,
J. Gray,
2006
.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2018,
Cell.
Laura M. Heiser,
Erik A. Burlingame,
P. Spellman,
2020
.
P. Spellman,
B. Hann,
E. Sergienko,
2015,
PloS one.
P. Spellman,
Peipei Zhou,
J. Cong,
2015
.
Laura M. Heiser,
P. Spellman,
G. Mills,
2016,
bioRxiv.
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2015
.
Reid F. Thompson,
P. Spellman,
Pavana Anur,
2022,
npj Precision Oncology.
Paul T. Spellman,
Kemal Sönmez,
W. Marston Linehan,
2016,
Nature Communications.
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2016,
Breast Cancer Research.
F. Markowetz,
P. Spellman,
G. Getz,
2018,
Tumor Biology.
R. Gibbs,
P. Spellman,
G. Mills,
2018
.
Noah E. Berlow,
P. Spellman,
R. Pal,
2020,
Sarcoma.
P. Spellman,
C. Boniface,
2022,
Pathology & Oncology Research.
P. Spellman,
J. Raber,
M. Ferencik,
2021,
Metabolites.
Large-Scale Characterization of Drug Responses of Clinically Relevant Proteins in Cancer Cell Lines.
P. Spellman,
G. Mills,
J. Gray,
2020,
Cancer cell.
P. Spellman,
G. Mills,
J. Gray,
2020,
bioRxiv.
P. Spellman,
K. Chiotti,
D. Rosanov,
2013
.
Nicholas J. Wang,
P. Spellman,
L. V. van't Veer,
2012,
Breast Cancer Research and Treatment.
Charles R. Thomas,
P. Spellman,
P. Okunieff,
2018,
Clinical Cancer Research.
Jian Li,
Lars Bolund,
Nam Huh,
2011,
Cancer discovery.
Nam Huh,
Elizabeth Purdom,
Andrew J Blumberg,
2014,
Cell reports.
Paul T. Spellman,
John Quackenbush,
Yoshio Tateno,
2004,
Environmental health perspectives.
Duccio Cavalieri,
John Quackenbush,
Terry Gaasterland,
2002,
Bioinformatics.
Laura M. Heiser,
Nicholas J. Wang,
Oana M. Enache,
2013
.
Laura M. Heiser,
P. Spellman,
J. Gray,
2011
.
Chris Sander,
David Haussler,
Wei Zhang,
2014
.
Nicholas J. Wang,
K. Cibulskis,
P. Spellman,
2011,
Genome Biology.
Catherine Brooksbank,
Duccio Cavalieri,
Paul T. Spellman,
2002,
Bioinform..
G. Sherlock,
P. Spellman,
2004
.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2018,
Cell.
Quoc V. Le,
P. Spellman,
Ju Han,
2022
.
D. Haussler,
A. McKenna,
S. Gabriel,
2014,
Cell.
Gerald M Rubin,
G. Rubin,
P. Spellman,
2002,
Journal of biology.
R. Gibbs,
P. Spellman,
G. Mills,
2018,
Cell reports.
P. Spellman,
D. Gilbert,
E. Bouhassira,
2022,
Nature Communications.
Joshua M. Stuart,
John D. Watson,
B. Haas,
2021,
Cell systems.
D. Botstein,
P. Brown,
P. Spellman,
1998,
Proceedings of the National Academy of Sciences of the United States of America.
Bahram Parvin,
Paul T. Spellman,
Steffen Durinck,
2010,
BMC Bioinformatics.
P. Spellman,
B. Lemaître,
N. Vodovar,
2005,
Proceedings of the National Academy of Sciences of the United States of America.
G. Rubin,
P. Spellman,
B. Lemaître,
2002,
The EMBO journal.
Ranadip Pal,
Charles Keller,
Nathalene Truffaux,
2015,
Nature Medicine.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2014,
Nature.
Bahram Parvin,
Hang Chang,
Paul T. Spellman,
2015,
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI).
Bahram Parvin,
Kenneth E. Barner,
Hang Chang,
2014,
2014 IEEE Conference on Computer Vision and Pattern Recognition.
Bahram Parvin,
Hang Chang,
Paul T. Spellman,
2013,
2013 IEEE International Conference on Computer Vision.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2013,
2013 IEEE Conference on Computer Vision and Pattern Recognition.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2013,
2013 IEEE 10th International Symposium on Biomedical Imaging.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2013,
IEEE Transactions on Medical Imaging.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2013,
2013 IEEE 10th International Symposium on Biomedical Imaging.
Quoc V. Le,
Bahram Parvin,
Paul T. Spellman,
2012,
2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).
Bahram Parvin,
Hang Chang,
Paul T. Spellman,
2011,
BMC Bioinformatics.
Quoc V. Le,
Bahram Parvin,
Ju Han,
2022
.
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2016,
Proceedings of the National Academy of Sciences.
Yuan Qi,
Jill P. Mesirov,
Li Ding,
2010
.
S. Gabriel,
J. Mesirov,
R. Wilson,
2010
.
Andrew C. Adey,
P. Spellman,
D. Qian,
2021,
Nature Biotechnology.
P. Spellman,
M. Thayer,
Michael B. Heskett,
2019,
bioRxiv.
Clement Adebamowo,
Ritika Kundra,
Steven J. M. Jones,
2018,
Cell reports.
Obi L. Griffith,
Paul T. Spellman,
Joe W. Gray,
2015,
PloS one.
Laura M. Heiser,
Nicholas J. Wang,
C. Tomlin,
2015,
PloS one.
P. Spellman,
G. Mills,
J. Gray,
2009,
BMC Medical Genomics.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2020,
Nature.
Andrew C. Adey,
P. Spellman,
D. Qian,
2020,
bioRxiv.
P. Spellman,
J. Gray,
D. Horsman,
2008,
BMC Cancer.
P. Spellman,
B. Lemaître,
Kuniaki Takahashi,
2006,
Genes to cells : devoted to molecular & cellular mechanisms.
Benjamin J. Raphael,
Salem Malikic,
Martin Peifer,
2017,
Nature.
P. Spellman,
K. Chin,
J. Gray,
2021,
JCI insight.
Paul T. Spellman,
Christine Ho,
Elizabeth Purdom,
2013,
Bioinform..
P. Spellman,
G. Mills,
N. Navin,
2020,
Nature Communications.
Ajay N. Jain,
P. Spellman,
J. Fridlyand,
2006
.
Nicholas J. Wang,
P. Spellman,
A. Ashworth,
2012,
Breast Cancer Research and Treatment.
Nam Huh,
Lauren E Haydu,
Elizabeth Purdom,
2015,
Proceedings of the National Academy of Sciences.
Joe W. Gray,
Stephen C. Benz,
P. Spellman,
2012,
Breast Cancer Research and Treatment.
P. Spellman,
S. Luoh,
K. Chin,
2013,
SpringerPlus.
Roland Eils,
Pablo H. Hennings-Yeomans,
Paul T. Spellman,
2014,
bioRxiv.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2020,
Nature Communications.
Byoung-Tak Zhang,
Pearlly Yan,
Kenneth P. Nephew,
2013,
Nucleic acids research.
G. Sherlock,
P. Spellman,
2005
.
Steven J. M. Jones,
Christopher A. Miller,
Joshua M. Stuart,
2014,
Nature.
Whole-genome characterization of lung adenocarcinomas lacking alterations in the RTK/RAS/RAF pathway
Steven J. M. Jones,
Mauro A. A. Castro,
Benjamin J. Raphael,
2021,
Cell reports.
P. Spellman,
L. Coussens,
J. Pollard,
2019,
Cancer cell.
P. Spellman,
2015
.
Ancha Baranova,
P. Spellman,
A. Baranova,
2015,
BMC Genomics.
Paul T. Spellman,
Joe W. Gray,
Yiling Lu,
2017,
Cell systems.
Zhi Hu,
Merrill Knapp,
Laura M. Heiser,
2009,
Genome Biology.
P. Spellman,
G. Mills,
K. Chin,
2021,
npj Precision Oncology.
Paul T. Spellman,
Richard A. Olshen,
Adam B. Olshen,
2011,
Bioinform..
Andrew C. Adey,
P. Spellman,
A. Fields,
2021,
Nature Communications.
Andrew C. Adey,
P. Spellman,
A. Fields,
2021,
bioRxiv.
David Botstein,
Paul T. Spellman,
Shuai Weng,
2001,
Nucleic Acids Res..
Li Ding,
Ilya Shmulevich,
Gordon B Mills,
2015,
JAMA oncology.
Margaret P. Chapman,
Andrew C. Adey,
Nicholas J. Wang,
2018,
Nature Communications.
Adrian V. Lee,
Laura M. Heiser,
P. Spellman,
2014,
Breast Cancer Research.
Steven J. M. Jones,
Benjamin J. Raphael,
Mark D. M. Leiserson,
2017,
Cancer cell.
Paul T. Spellman,
Joe W. Gray,
Mina J. Bissell,
2012,
PloS one.
Steven J. M. Jones,
Eric S. Lander,
Benjamin J. Raphael,
2013,
Nature.
Paul T. Spellman,
Ed Reznik,
Rehan Akbani,
2018,
Cell reports.
Nicholas J. Wang,
T. Speed,
P. Spellman,
2006
.
P. Spellman,
Myron Peto,
M. Grompe,
2021,
Nature communications.
Paul T. Spellman,
Rafael A. Irizarry,
John Quackenbush,
2006,
BMC Bioinformatics.
P. Spellman,
J. Burchard,
J. Minnier,
2017,
JCI insight.
Obi L Griffith,
Laura M. Heiser,
Oana M. Enache,
2013,
Genome Medicine.
Terence P. Speed,
Paul T. Spellman,
Xin Victoria Wang,
2011,
PloS one.
Tina N. Davis,
Forrest M Kievit,
Atique U. Ahmed,
2013
.
James Ireland,
Laura Esserman,
Laura M. Heiser,
2007,
Genome Biology.
Brooke L. Fridley,
Matthias W. Beckmann,
Peter A. Fasching,
2013,
Nature Genetics.
P. Spellman,
Thuy T. M. Ngo,
Hyun Ji Kim,
2020,
Scientific Reports.
P. Spellman,
S. Luoh,
J. Minnier,
2021,
JCO precision oncology.
Nicholas J. Wang,
P. Spellman,
J. Gray,
2018,
Radiation Research.
Catherine Klifa,
Ying Lu,
Nola Hylton,
2011,
Integrative biology : quantitative biosciences from nano to macro.
P. Spellman,
J. Gray,
J. Gray,
2011,
Nature Medicine.
A. Strongin,
P. Spellman,
D. Rozanov,
2015,
PloS one.
Laura M. Heiser,
Erik A. Burlingame,
P. Spellman,
2020,
bioRxiv.
Laura M. Heiser,
P. Spellman,
J. Tyner,
2015,
Oncotarget.
John Quackenbush,
Yoshio Tateno,
Helen Parkinson,
2004,
Microbiology.
Duccio Cavalieri,
John Quackenbush,
Terry Gaasterland,
2002,
Science.
Robert Gentleman,
John Quackenbush,
Wolfgang Huber,
2006,
Nature.
Paul T. Spellman,
Steffen Durinck,
Sandrine Dudoit,
2009,
BMC Bioinformatics.
Gavin Sherlock,
G. Sherlock,
P. Spellman,
2004,
Trends in Biotechnology.
Gavin Sherlock,
G. Sherlock,
P. Spellman,
2004,
Trends in biotechnology.
C Blake Gilks,
Joe Gray,
David G Huntsman,
2008,
Genes, chromosomes & cancer.
P. Spellman,
M. Thayer,
P. Yates,
2022,
bioRxiv.
P. Spellman,
M. Thayer,
Michael B. Heskett,
2021,
Non-coding RNA.
Laura M. Heiser,
P. Spellman,
J. Gray,
2012,
Cancer discovery.
P. Spellman,
Pavana Anur,
P. Sims,
2013,
Molecular Cancer.
P. Spellman,
M. Dai,
R. Sears,
2017,
Biochemical and biophysical research communications.
P. Spellman,
Myron Peto,
M. Grompe,
2021,
Nature Communications.
P. Spellman,
J. Gray,
T. Butler,
2017,
Current opinion in genetics & development.
A systems analysis of the chemosensitivity of breast cancer cells to the polyamine analogue PG-11047
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2009,
BMC medicine.
Terence P. Speed,
Paul T. Spellman,
Henrik Bengtsson,
2009,
Bioinform..
Vineet Bafna,
Naoto Hirano,
Pavel Pevzner,
2018,
Journal of proteomics.
P. Spellman,
K. Chin,
L. Coussens,
2020,
medRxiv.
Charles R. Thomas,
P. Spellman,
C. Deig,
2020,
Diagnostics.
Terence P. Speed,
Paul T. Spellman,
Joe W. Gray,
2012,
Bioinform..
Adam A. Margolin,
P. Spellman,
T. Speed,
2022,
bioRxiv.
P. Spellman,
D. Wassarman,
L. Pile,
2003,
Journal of Biological Chemistry.
Bahram Parvin,
Hang Chang,
Paul T. Spellman,
2013,
MICCAI.
P. Spellman,
J. Gray,
J. Costello,
2008
.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2017,
bioRxiv.
Nicholas J. Wang,
P. Spellman,
J. Gray,
2016,
Cell cycle.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2023,
Nature.
F. Markowetz,
P. Spellman,
G. Getz,
2017,
bioRxiv.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2019,
Nature Communications.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2012,
2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).
P. Spellman,
J. Gray,
C. Corless,
2019,
Cold Spring Harbor molecular case studies.
P. Spellman,
R. Cho,
S. Benz,
2019,
Modern Pathology.
P. Spellman,
G. Mills,
J. Gray,
2018,
bioRxiv.
Andrew C. Adey,
P. Spellman,
L. Coussens,
2023,
bioRxiv.
Andrew R Jones,
Angel Pizarro,
Michael Miller,
2006,
Omics : a journal of integrative biology.
P. Spellman,
J. Slansky,
2019,
The New England journal of medicine.
P. Spellman,
M. Grompe,
C. Dorrell,
2018,
Molecular therapy : the journal of the American Society of Gene Therapy.
P. Spellman,
R A George,
J P Woolley,
2001,
Genome research.
P. Spellman,
B. Parvin,
A. Borowsky,
2015,
International Journal of Computer Vision.
Bahram Parvin,
Kai Zhang,
Hang Chang,
2011,
2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
P. Spellman,
A. Agarwal,
Elisabeth A. Goldman,
2023,
Cold Spring Harbor molecular case studies.
P. Spellman,
E. Demir,
B. Druker,
2023,
bioRxiv.
Ajay N. Jain,
Gene W. Yeo,
C. Y. Wang,
1968
.
P. Spellman,
R. A. George,
J. P. Woolley,
2001
.
Bahram Parvin,
Hang Chang,
Paul T. Spellman,
2012,
IEEE Transactions on Biomedical Engineering.
Mark A. Dane,
Laura M. Heiser,
Nicholas J. Wang,
2017,
Breast Cancer Research.
F. Markowetz,
P. Spellman,
Q. Morris,
2017,
bioRxiv.
Andrew C. Adey,
Asia D. Mitchell,
B. O’Roak,
2023,
American journal of human genetics.
Bahram Parvin,
Hang Chang,
Alexander Borowsky,
2012,
2012 9th IEEE International Symposium on Biomedical Imaging (ISBI).
Joshua F. McMichael,
James M. Eldred,
Martin L. Miller,
2013
.
Nuno A. Fonseca,
Benjamin J. Raphael,
Allison P. Heath,
2020,
Nature Communications.
Nicholas J. Wang,
P. Spellman,
H. Feiler,
2008
.
Laura M. Heiser,
Nicholas J. Wang,
P. Spellman,
2009,
BMC medicine.
Laura M. Heiser,
P. Spellman,
K. Chin,
2008
.
P. Spellman,
R. Cho,
S. Benz,
2019,
bioRxiv.
Laura M. Heiser,
P. Spellman,
P. Lincoln,
2006,
Nature Cell Biology.
Andrew C. Adey,
Erik A. Burlingame,
P. Spellman,
2023,
bioRxiv.
P. Spellman,
W. Kuo,
R. Neve,
2012,
BMC Bioinformatics.
Genomic and transcriptional events associated with poor clinical responses to conventional therapies
P. Spellman,
J. Fridlyand,
H. Johnsen,
2005,
Breast Cancer Research.
Terence P. Speed,
Paul T. Spellman,
Joe W. Gray,
2009,
Bioinform..
D. Botstein,
P. Brown,
P. Spellman,
1999,
Nature Genetics.
C. Ball,
G. Sherlock,
P. Spellman,
2006
.
P. Spellman,
Pavana Anur,
P. Sims,
2013,
Molecular Cancer.
Laura M. Heiser,
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