S. Sherry

发表

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

M. Daly, G. Marth, E. Lander, 2001, Nature.

dbSNP: the NCBI database of genetic variation

Elizabeth M. Smigielski, Karl Sirotkin, Minghong Ward, 2001, Nucleic Acids Res..

Completing the map of human genetic variation

D. Altshuler, L. Brooks, N. Carter, 2007, Nature.

A second generation human haplotype map of over 3.1 million SNPs

Zhaohui S. Qin, Gudmundur A. Thorisson, L. M. Sung, 2007, Nature.

The NCBI dbGaP database of genotypes and phenotypes

K. Sirotkin, S. Sherry, J. Ostell, 2007, Nature Genetics.

Extensive sequencing of seven human genomes to characterize benchmark reference materials

Alexa B. R. McIntyre, Grace X. Y. Zheng, Mark J. P. Chaisson, 2015, Scientific Data.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Deanna M. Church, 2021, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Lewis Y. Geer, Thomas L. Madden, Evan E. Bolton, 2014, Nucleic Acids Res..

The Allele Frequency Spectrum in Genome-Wide Human Variation Data Reveals Signals of Differential Demographic History in Three Large World Populations

Gabor T. Marth, G. Marth, S. Sherry, 2004, Genetics.

dbSNP-database for single nucleotide polymorphisms and other classes of minor genetic variation.

K. Sirotkin, S. Sherry, M. Ward, 1999, Genome research.

Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones

Kanako O. Koyanagi, Michael A. Thomas, H. Mewes, 2004, PLoS Biology.

ClinGen--the Clinical Genome Resource.

Heidi L Rehm, Jonathan S Berg, Stephen T Sherry, 2015, The New England journal of medicine.

Assessing and managing risk when sharing aggregate genetic variant data

Robert M. Goor, S. Sherry, J. Ostell, 2011, Nature Reviews Genetics.

New models of collaboration in genome-wide association studies: the Genetic Association Information Network

P. Donnelly, S. Gabriel, G. Abecasis, 2007, Nature Genetics.

Patterns of human diversity, within and among continents, inferred from biallelic DNA polymorphisms.

S. Sherry, D. Balding, M. Stoneking, 2002, Genome research.

Brief Communication: Extraction of DNA from Frozen Red Blood Cells

K. Weiss, S. Sherry, M. Stoneking, 1993 .

The 1000 Genomes Project: data management and community access

Brendan W. Vaughan, R. Leinonen, S. Sherry, 2012, Nature Methods.

Database resources of the National Center for Biotechnology Information

Evan E. Bolton, A. Panchenko, A. Marchler-Bauer, 2011, Nucleic acids research.

Registered access: authorizing data access

Alan C. Evans, J. D. Spalding, A. Philippakis, 2018, European Journal of Human Genetics.

Data use under the NIH GWAS Data Sharing Policy and future directions

Hilary S. Leeds, S. Sherry, E. Gillanders, 2014, Nature Genetics.

A mechanism for controlled access to GWAS data: experience of the GAIN Data Access Committee.

S. Sherry, T. Lehner, T. Manolio, 2013, American journal of human genetics.

Consent Codes: Upholding Standard Data Use Conditions

Jordi Rambla De Argila, J. D. Spalding, A. Philippakis, 2016, PLoS genetics.

The Single Nucleotide Polymorphism Database (dbSNP) of Nucleotide Sequence Variation

Adrienne Kitts, Stephen Sherry, S. Sherry, 2011 .

Genetic traces of ancient demography.

S T Sherry, S. Sherry, M. Batzer, 1998, Proceedings of the National Academy of Sciences of the United States of America.

Characterizing genetic variants for clinical action

Kensaku Kawamoto, Nazneen Rahman, Elaine Lyon, 2014, American journal of medical genetics. Part C, Seminars in medical genetics.

Correction: Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones

Kanako O. Koyanagi, Michael A. Thomas, Gopal R. Gopinath, 2004, PLoS biology.

Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073

Ken Chen, Joshua M. Korn, Afidalina Tumian, 2010 .

A Mathematical Approach to the Analysis of Multiplex DNA Profiles

Stephen T Sherry, Robert M. Goor, S. Sherry, 2011, Bulletin of mathematical biology.

Phenotype–Genotype Integrator (PheGenI): synthesizing genome-wide association study (GWAS) data with existing genomic resources

Lon Phan, Stephen T Sherry, Lucia A Hindorff, 2013, European Journal of Human Genetics.

A global reference for human genetic variation

Gabor T. Marth, Shane A. McCarthy, Alissa M. Resch, 2015, Nature.

GenBank

S. Sherry, Kim D. Pruitt, I. Karsch-Mizrachi, 2013, Nucleic Acids Res..

Supplementing High-Density SNP Microarrays for Additional Coverage of Disease-Related Genes: Addiction as a Paradigm

Elissa J. Chesler, Laura J. Bierut, Stephen T. Sherry, 2009, PloS one.

Database resources of the National Center for Biotechnology Information

S. Bryant, D. Church, T. Tatusova, 2008, Nucleic acids research.

Establishing reference samples for detection of somatic mutations and germline variants with NGS technologies

Hugo Y. K. Lam, Daoud M. Meerzaman, S. Sherry, 2019, bioRxiv.

GenBank

S. Sherry, K. Pruitt, I. Karsch-Mizrachi, 2020, Nucleic acids research.

Database resources of the National Center for Biotechnology Information.

David L. Wheeler, S. Bryant, D. Church, 2001, Nucleic acids research.

Database resources of the National Center for Biotechnology Information in 2023

Thomas L. Madden, Donald C. Comeau, Eneida L. Hatcher, 2022, Nucleic Acids Res..

Estimating human effective population sizes with genetic models incorporating demographic fluctuation

S. Sherry, 1997 .

DNA Identifications After the 9/11 World Trade Center Attack

Bruce Budowle, Joan E Bailey-Wilson, Leslie G Biesecker, 2005, Science.

Database resources of the National Center for Biotechnology Information

Zhiyong Lu, Evan Bolton, Ian M. Fingerman, 2020, Nucleic Acids Res..

The variant call format and VCFtools

Gonçalo R. Abecasis, Richard Durbin, Stephen T. Sherry, 2011, Bioinform..

Database resources of the National Center for Biotechnology Information

Evan Bolton, Mark Johnson, Rebecca Orris, 2017, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2008, Nucleic Acids Res..

An integrated map of genetic variation from 1,092 human genomes

Kenny Q. Ye, Mauricio O. Carneiro, Francisco M. De La Vega, 2012, Nature.

MODELING THE GENETIC ARCHITECTURE OF MODERN POPULATIONS

S. Sherry, M. Batzer, H. Harpending, 1998 .

Mismatch distributions of mtDNA reveal recent human population expansions.

S T Sherry, S. Sherry, M. Stoneking, 1994, Human biology.

New approaches to dating suggest a recent age for the human mtDNA ancestor.

S T Sherry, S. Sherry, M. Stoneking, 1992, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

The Genetic Structure of Ancient Human Populations

Stephen T. Sherry, Mark Stoneking, Alan R. Rogers, 1993, Current Anthropology.

Sequence variations in the public human genome data reflect a bottlenecked population history

Pui-Yan Kwok, Lon Phan, Richa Agarwala, 2002, Proceedings of the National Academy of Sciences of the United States of America.

A robust benchmark for detection of germline large deletions and insertions

Ken Chen, Adam M. Phillippy, Iman Hajirasouliha, 2020, Nature Biotechnology.

Alu evolution in human populations: using the coalescent to estimate effective population size.

S. Sherry, M. Stoneking, M. Batzer, 1997, Genetics.

Reading between the LINEs: human genomic variation induced by LINE-1 retrotransposition.

S T Sherry, S. Sherry, M. Stoneking, 2000, Genome research.

A haplotype map of the human genome The International HapMap Consortium

Li, Yi, Jun, 2005 .

dbSNP: a database of single nucleotide polymorphisms

Elizabeth M. Smigielski, Karl Sirotkin, Minghong Ward, 2000, Nucleic Acids Res..

Assembly of a high-resolution map of the Acadian Usher syndrome region and localization of the nuclear EF-hand acidic gene.

S. Sherry, M. Batzer, J. Doucet, 1998, Biochimica et biophysica acta.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2007, Nucleic Acids Res..

Alu insertion polymorphisms and the genetic structure of human populations from the Caucasus

S. Sherry, M. Stoneking, M. Batzer, 2001, European Journal of Human Genetics.

Use of molecular variation in the NCBI dbSNP database

S T Sherry, K. Sirotkin, S. Sherry, 2000, Human mutation.

Molecular biology and human diversity: Methods and models for understanding human diversity

J. Relethford, S. Sherry, H. Harpending, 1996 .

Modeling human evolution--to tree or not to tree?

S. Sherry, M. Batzer, Stephen T. Sherry, 1997, Genome research.

A robust benchmark for germline structural variant detection

Sergey Koren, Adam M. Phillippy, Iman Hajirasouliha, 2019, bioRxiv.

A robust benchmark for germline large deletion and insertion detection

Nathan D. Olson, Ian T. Fiddes, Ryan E. Mills, 2022 .

Databases in human and medical genetics

S. Sherry, D. Maglott, M. Feolo, 2010 .

Long DOP-PCR of rare archival anthropological samples.

K. Weiss, S. Sherry, M. Batzer, 2000, Human biology.

Interspersed Repeat Insertion Polymorphisms for Studies of Human Molecular Anthropology

S. Sherry, M. Stoneking, C. Donaldson, 1999 .

Database resources of the National Center for Biotechnology Information

Evan Bolton, Yanli Wang, Abigail Acland, 2001, Nucleic Acids Res..

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Hugo Y. K. Lam, Winnie S. Liang, Daoud M. Meerzaman, 2021, Nature Biotechnology.

Quickly identifying identical and closely related subjects in large databases using genotype data

Alejandro A Schäffer, Stephen T Sherry, Yumi Jin, 2017, PloS one.

Reproducible integration of multiple sequencing datasets to form high-confidence SNP, indel, and reference calls for five human genome reference materials

Chunlin Xiao, Marc Salit, Francisco M. De La Vega, 2018, bioRxiv.

An open resource for accurately benchmarking small variant and reference calls

Chunlin Xiao, Marc Salit, Justin M Zook, 2019, Nature Biotechnology.

The structure of human mitochondrial DNA variation

Andrew G. Clark, Trefor Jenkins, Stephen T. Sherry, 1991, Journal of Molecular Evolution.

Identification and characterization of two polymorphic Ya5 Alu repeats.

S. Sherry, M. Batzer, A. Carrano, 1997, Mutation research.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, David L. Wheeler, 2018, Nucleic acids research.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2012, Nucleic Acids Res..

DNA Commission of the International Society for Forensic Genetics: Recommendations on the validation of software programs performing biostatistical calculations for forensic genetics applications.

J Buckleton, P Gill, W Parson, 2016, Forensic science international. Genetics.

The dbGaP data browser: a new tool for browsing dbGaP controlled-access genomic data

Laura Lyman Rodriguez, Erin M. Ramos, Stephen T. Sherry, 2016, Nucleic Acids Res..

Evolutionary history of the COII/tRNALys intergenic 9 base pair deletion in human mitochondrial DNAs from the Pacific.

S T Sherry, N Takezaki, S. Sherry, 1995, Molecular biology and evolution.

A robust benchmark for detection of germline large deletions and insertions

Ian T. Fiddes, Jay M. Sage, Michael D. Kaiser, 2020, Nature Biotechnology.

Registered access: authorizing data access

Alan C. Evans, J. D. Spalding, A. Philippakis, 2018, European Journal of Human Genetics.

Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing

Thomas M. Blomquist, Daoud M. Meerzaman, S. Sherry, 2021, Nature Biotechnology.

Inference and analysis of haplotypes from combined genotyping studies deposited in dbSNP.

Eran Halperin, Eleazar Eskin, Hyun Min Kang, 2005, Genome research.

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, Stephen H. Bryant, Lewis Y. Geer, 2011, Nucleic Acids Res..

NCBI genetic resources supporting immunogenetic research.

W Helmberg, M Feolo, S Sherry, 2000, Reviews in immunogenetics.

Human genome meeting 2016

A. Pang, W. Chung, J. Lupski, 2016, Human Genomics.

Federated discovery and sharing of genomic data using Beacons

J. D. Spalding, D. Haussler, P. Flicek, 2019, Nature Biotechnology.

Mitochondrial DNA and Y chromosome diversity and the peopling of the Americas: Evolutionary and demographic evidence

S. Sherry, T. Schurr, 2004, American journal of human biology : the official journal of the Human Biology Council.

Geographic origin of human mitochondrial DNA revisited

S. Sherry, M. Stoneking, L. Vigilant, 1992 .

Human genome meeting 2016

Kumar Kshitij Patel, A. Pang, W. Chung, 2016, Human Genomics.

Database resources of the National Center for Biotechnology Information

Donald C. Comeau, Evan E. Bolton, Rebecca J Williams, 2009, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Gregory D. Schuler, David L. Wheeler, Deanna M. Church, 2006, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Ian M. Fingerman, Lewis Y. Geer, Thomas L. Madden, 2010, Nucleic Acids Res..

Database resources of the national center for biotechnology information

Donald C. Comeau, Evan E. Bolton, Rebecca J Williams, 2021, Nucleic Acids Res..

Database resources of the National Center for Biotechnology Information

Thomas L. Madden, Donald C. Comeau, Evan E. Bolton, 2020, Nucleic Acids Res..

High-coverage, long-read sequencing of Han Chinese trio reference samples

Marc L. Salit, Gintaras Deikus, Ying-Chih Wang, 2019, Scientific Data.

Response: Alu repeats and human evolution

S. Sherry, M. Stoneking, M. Batzer, 1997 .

Federated discovery and sharing of genomic data using Beacons

David Haussler, Angela Page, Mikael Linden, 2019, Nature Biotechnology.

Peer Reviewed Journals

K. Kidd, S. Sherry, T. Parsons, 2020 .

Assessing and managing risk when sharing aggregate genetic variant data

Stephen T. Sherry, Teri A. Manolio, Michael Feolo, 2011, Nature Reviews Genetics.

ClinGen--the Clinical Genome Resource.

L. Brooks, D. Ledbetter, S. Sherry, 2015, The New England journal of medicine.

Extensive sequencing of seven human genomes to characterize benchmark reference materials

Gintaras Deikus, Ali Bashir, Alex Hastie, 2015, Scientific Data.

Indexing pharmacogenetic knowledge on the World Wide Web.

Russ B Altman, Daniel L Rubin, Teri E Klein, 2003, Pharmacogenetics.

Assessing and managing risk when sharing aggregate genetic variant data

Robert M. Goor, S. Sherry, J. Ostell, 2011, Nature Reviews Genetics.