N. Allewell

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Structure and Catalytic Mechanism of a Novel N-Succinyl-l-ornithine Transcarbamylase in Arginine Biosynthesis of Bacteroides fragilis*

D. Shi, H. Morizono, Juan Cabrera-Luque, 2006, Journal of Biological Chemistry.

Chapter 3 Electrostatic effects in proteins: Experimental and computational approaches

N. Allewell, H. Oberoi, M. Hariharan, 1999 .

Thematic Minireview Series on Enzyme Evolution in the Post-genomic Era

N. Allewell, Norma M Allewell, 2011, The Journal of Biological Chemistry.

Multigrid solution of the nonlinear Poisson-Boltzmann equation and calculation of titration curves.

N. Allewell, H. Oberoi, N M Allewell, 1993, Biophysical journal.

Structure and function of Escherichia coli RimK, an ATP‐grasp fold, l‐glutamyl ligase enzyme

D. Shi, N. Allewell, M. Tuchman, 2013, Proteins.

Hydrogen exchange studies of proteins: recent advances in medium and high resolution methods.

N. Allewell, 1983, Journal of biochemical and biophysical methods.

Structural fluctuations in aspartate transcarbamylase. Succinimide quenching and fluorescence depolarization of tryptophan and tyrosine residues.

N. Allewell, B. Maliwal, J. Lakowicz, 1984, Biophysical chemistry.

The structure of ribonuclease-S at 6 A resolution.

N. Allewell, F. Richards, L. Johnson, 1967, The Journal of biological chemistry.

Use of analytical gel chromatography to analyze tertiary and quaternary structural changes in E. coli aspartate transcarbamylase.

N. Allewell, D. Burz, S. Bromberg, 1990, Journal of biochemical and biophysical methods.

Crystal Structure of the N-Acetyltransferase Domain of Human N-Acetyl-L-Glutamate Synthase in Complex with N-Acetyl-L-Glutamate Provides Insights into Its Catalytic and Regulatory Mechanisms

D. Shi, N. Allewell, M. Tuchman, 2013, PloS one.

Crystal structure and biochemical properties of putrescine carbamoyltransferase from Enterococcus faecalis: Assembly, active site, and allosteric regulation

D. Shi, Xiaolin Yu, N. Allewell, 2012, Proteins.

A Novel N-Acetylglutamate Synthase Architecture Revealed by the Crystal Structure of the Bifunctional Enzyme from Maricaulis maris

D. Shi, Juan Cabrera-Luque, Xiaolin Yu, 2011, PloS one.

A single mutation in the active site swaps the substrate specificity of N‐acetyl‐L‐ornithine transcarbamylase and N‐succinyl‐L‐ornithine transcarbamylase

D. Shi, H. Morizono, Juan Cabrera-Luque, 2007, Protein science : a publication of the Protein Society.

Molecular Biophysics for the Life Sciences

N. Allewell, I. Rayment, L. Narhi, 2013, Biophysics for the Life Sciences.

The Crystal Structure of N-Acetyl-L-glutamate Synthase from Neisseria gonorrhoeae Provides Insights into Mechanisms of Catalysis and Regulation*

D. Shi, H. Morizono, Xiaolin Yu, 2008, Journal of Biological Chemistry.

Ionic properties of membrane association by vitamin K-dependent proteins: the case for univalency.

N. Allewell, M. Pusey, G. Nelsestuen, 1997, Biochemistry.

[28] Thermodynamic approaches to understanding aspartate transcarbamylase

N. Allewell, V. J. Licata, 1995 .

Differential scanning calorimetric studies of E. coli aspartate transcarbamylase. III. The denaturational thermodynamics of the holoenzyme with single-site mutations in the catalytic chain.

N. Allewell, J. Sturtevant, D. Burz, 1990, Biophysical chemistry.

Differential scanning calorimetric study of the thermal denaturation of aspartate transcarbamoylase of Escherichia coli.

N. Allewell, J. Sturtevant, V. Edge, 1988, Biochemistry.

Expression, purification, crystallization and preliminary X-ray crystallographic studies of a novel acetylcitrulline deacetylase from Xanthomonas campestris.

D. Shi, H. Morizono, Xiaolin Yu, 2005, Acta crystallographica. Section F, Structural biology and crystallization communications.

Identification, cloning and expression of the mouse N-acetylglutamate synthase gene.

D. Shi, H. Morizono, Xiaolin Yu, 2002, The Biochemical journal.

Tertiary templates and compact units in protein design

N. Allewell, 1987 .

Enthalpies of ligand binding to bovine neurophysins.

N. Allewell, E. Breslow, B. Whittaker, 1985, Biochemistry.

Effects of ATP and CTP on the conformation of the regulatory subunit of Escherichia coli aspartate transcarbamylase in solution: a medium-resolution hydrogen exchange study.

N. Allewell, D. Burz, D. Mallikarachchi, 1989, Biochemistry.

Effects of ionic strength and state of assembly on kinetics of hydrogen exchange of calf thymus histones.

R. C. Benedict, N. Allewell, G. K. Ackers, 1984, Biochemistry.

Untangling the energetics of protein folding.

N. Allewell, 1993, Trends in biochemical sciences.

Crystal structure of bullfrog M ferritin at 2.8 Å resolution: analysis of subunit interactions and the binuclear metal center

Elizabeth C. Theil, D. Shi, N. Allewell, 1999, JBIC Journal of Biological Inorganic Chemistry.

Preliminary analysis of amphibian red cell M ferritin in a novel tetragonal unit cell.

Elizabeth C. Theil, N. Allewell, Y. Ha, 1997, Acta crystallographica. Section D, Biological crystallography.

Protein structure, ribonuclease-S and nucleotide interactions.

B. Lee, N. Allewell, F. Richards, 1972, Cold Spring Harbor symposia on quantitative biology.

A physicochemical analysis of conjugation in Tetrahymena pyriformis.

N. Allewell, J. Wolfe, J. Oles, 1976, Experimental cell research.

Localized Unfolding at the Junction of Three Ferritin Subunits

Elizabeth C. Theil, D. Shi, N. Allewell, 1998, The Journal of Biological Chemistry.

Cloning and expression of the human N-acetylglutamate synthase gene.

D. Shi, H. Morizono, Xiaolin Yu, 2002, Biochemical and biophysical research communications.

Crystallization and structural analysis of bullfrog red cell L‐subunit ferritins

Elizabeth C. Theil, N. Allewell, P. Weber, 1994, Proteins.

High resolution crystal structures of amphibian red-cell L ferritin: potential roles for structural plasticity and solvation in function.

Elizabeth C. Theil, N. Allewell, J. Trikha, 1995, Journal of molecular biology.

The structure of ribonuclease-S at 3.5 A resolution.

F M Richards, N. Allewell, F. Richards, 1967, The Journal of biological chemistry.

Reversible post-translational carboxylation modulates the enzymatic activity of N-acetyl-L-ornithine transcarbamylase.

D. Shi, Xiaolin Yu, N. Allewell, 2010, Biochemistry.

Chapter 1 Proteins: An introduction

N. Allewell, V. J. Licata, Xiaoling Yuan, 1995 .

Ligation alters the pathway of urea‐induced denaturation of the catalytic trimer of Escherichia coli aspartate transcarbamylase

N. Allewell, V. J. Licata, S. Bromberg, 1994, Protein science : a publication of the Protein Society.

The biochemical and molecular spectrum of ornithine transcarbamylase deficiency

H. Morizono, N. Allewell, M. Tuchman, 1998, Journal of Inherited Metabolic Disease.

Evolution, Mechanisms, and Applications of Intein-mediated Protein Splicing

N. Allewell, F. Perler, 2014, The Journal of Biological Chemistry.

Acetylornithine Transcarbamylase: a Novel Enzyme in Arginine Biosynthesis

Norma M. Allewell, Hiroki Morizono, D. Shi, 2006, Journal of bacteriology.

The N-Acetylglutamate Synthase Family: Structures, Function and Mechanisms

D. Shi, N. Allewell, M. Tuchman, 2015, International journal of molecular sciences.

Design of a diffractometer and flow cell system for X-ray analysis of crystalline proteins with applications to the crystal chemistry of ribonuclease-S.

N. Allewell, F. Richards, L. Johnson, 1967, Journal of molecular biology.

Electrostatic effects in protein folding, stability, and function.

N. Allewell, H. Oberoi, 1991, Methods in enzymology.

Crystallization and preliminary X-ray crystallographic studies of wild-type human ornithine transcarbamylase and two naturally occurring mutants at position 277.

D. Shi, H. Morizono, N. Allewell, 2001, Acta crystallographica. Section D, Biological crystallography.

Chapter 8 – Diffraction Methods

Norma M. Allewell, J. Trikha, N. Allewell, 1995 .

High-resolution differential scanning calorimetric analysis of the subunits of Escherichia coli aspartate transcarbamoylase.

N. Allewell, J. Sturtevant, V. Edge, 1985, Biochemistry.

Structure of a novel N-acetyl-L-citrulline deacetylase from Xanthomonas campestris.

D. Shi, Xiaolin Yu, L. Roth, 2007, Biophysical chemistry.

Crystal Structure of N-Acetylornithine Transcarbamylase from Xanthomonas campestris

Hiroki Morizono, D. Shi, H. Morizono, 2005, Journal of Biological Chemistry.

Expression, purification, and characterization of recombinant human glutamine synthetase.

H. Morizono, N. Allewell, M. Tuchman, 1997, The Biochemical journal.

From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases

D. Shi, N. Allewell, M. Tuchman, 2015, International journal of molecular sciences.

Crystal structure of a transcarbamylase-like protein from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution.

Hiroki Morizono, D. Shi, H. Morizono, 2002, Journal of molecular biology.

Is substrate inhibition a consequence of allostery in aspartate transcarbamylase?

N. Allewell, V. J. Licata, 1997, Biophysical chemistry.

Measuring hydration changes of proteins in solution: applications of osmotic stress and structure-based calculations.

N. Allewell, V. J. Licata, 1998, Methods in enzymology.

Identification of ‘private’ mutations in patients with ornithine transcarbamylase deficiency

M. Tuchman, H. Morizono, N. Allewell, 1997, Journal of Inherited Metabolic Disease.

Faculty Opinions recommendation of Disulfide isomerase activity of the dynamic, trimeric Proteus mirabilis ScsC protein is primed by the tandem immunoglobulin-fold domain of ScsB.

N. Allewell, 2018 .

'Late onset' ornithine transcarbamylase deficiency: function of three purified recombinant mutant enzymes.

H. Morizono, N. Allewell, M. Tuchman, 1997, Human molecular genetics.

Thermodynamics of assembly of Escherichia coli aspartate transcarbamoylase.

N. Allewell, M. McCarthy, 1983, Proceedings of the National Academy of Sciences of the United States of America.

Electrostatic interactions in the assembly of Escherichia coli aspartate transcarbamylase

N. Allewell, J. B. Matthew, M. McCarthy, 1989, Proteins.

Structure of the complex of Neisseria gonorrhoeae N-acetyl-L-glutamate synthase with a bound bisubstrate analog.

D. Shi, N. Allewell, M. Tuchman, 2013, Biochemical and biophysical research communications.

Crystallographic analysis of the interaction of cuypric ion with ribonuclease S.

N. Allewell, H. Wyckoff, 1971, The Journal of biological chemistry.

Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.

D. Shi, H. Morizono, N. Allewell, 2001, The Biochemical journal.

Substrate-induced conformational change in a trimeric ornithine transcarbamoylase.

N. Allewell, M. Tuchman, Y. Ha, 1997, Proceedings of the National Academy of Sciences of the United States of America.

The molecular basis of ornithine transcarbamylase deficiency: modelling the human enzyme and the effects of mutations.

H. Morizono, N. Allewell, M. Tuchman, 1995, Journal of medical genetics.

Functionally linked hydration changes in Escherichia coli aspartate transcarbamylase and its catalytic subunit.

N. Allewell, V. J. Licata, V J LiCata, 1997, Biochemistry.

Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine*

D. Shi, H. Morizono, N. Allewell, 2009, Journal of Biological Chemistry.

A kinetic analysis of the memory of a developmental interaction. Mating interactions in Tetrahymena pyriformis.

N. Allewell, J. Wolfe, 1977, Experimental cell research.

1.85-A resolution crystal structure of human ornithine transcarbamoylase complexed with N-phosphonacetyl-L-ornithine. Catalytic mechanism and correlation with inherited deficiency.

D. Shi, H. Morizono, N. Allewell, 1998, The Journal of biological chemistry.

X-ray Diffraction Studies of ε-41-Dinitrophenyl-Ribonuclease-S

N. Allewell, H. Wyckoff, Y. Mitsui, 1973 .

High resolution studies of E. coli aspartate transcarbamoylase come of age

N. Allewell, 1987 .

Escherichia coli aspartate transcarbamoylase: structure, energetics, and catalytic and regulatory mechanisms.

N. Allewell, 1989, Annual Review of Biophysics and Biophysical Chemistry.

Interactions of ionizable groups in Escherichia coli aspartate transcarbamylase with adenosine and cytidine 5'-triphosphates.

N. Allewell, D. Burz, 1982, Biochemistry.

Changes in the hydrogen exchange kinetics of Escherichia coli aspartate transcarbamylase produced by effector binding and subunit association.

N. Allewell, M. Lennick, 1981, Proceedings of the National Academy of Sciences of the United States of America.

Calorimetric analysis of aspartate transcarbamylase from Escherichia coli. Binding of substrates and substrate analogues to the native enzyme and catalytic subunit.

N. Allewell, B. Knier, 1978, Biochemistry.

Calorimetric analysis of aspartate transcarbamylase from Escherichia coli: binding of cytosine 5'-triphosphate and adenosine 5'-triphosphate.

N. Allewell, K. Niekamp, J. Friedland, 1975, Biochemistry.

Crystal structure of human ornithine transcarbamylase complexed with carbamoyl phosphate and L‐norvaline at 1.9 Å resolution

D. Shi, H. Morizono, N. Allewell, 2000, Proteins.

Analysis of self-association of bovine neurophysins by gel chromatography.

N. Allewell, B. Whittaker, 1984, Archives of biochemistry and biophysics.

The ygeW encoded protein from Escherichia coli is a knotted ancestral catabolic transcarbamylase

Zhongmin Jin, D. Shi, Xiaolin Yu, 2011, Proteins.

Regulation of neutral protease activity through the life cycles of Tetrahymena pyriformis.

N. Allewell, F. Suprynowicz, 1979, Biochimica et biophysica acta.

Thematic Minireview Series on Circular Proteins

David J Craik, N. Allewell, D. Craik, 2012, The Journal of Biological Chemistry.

Introduction to Biofilms Thematic Minireview Series*

N. Allewell, 2016, The Journal of Biological Chemistry.

Using Molecular Graphics to Analyze Protein Structures

Himanshu Oberoi, Norma M. Allewell, N. Allewell, 1997 .

Identification and analysis of long‐range electrostatic effects in proteins by computer modeling:Aspartate transcarbamylase

N. Allewell, H. Oberoi, Xiaoling Yuan, 1996, Proteins.