A. Feeney

发表

Nucleotide deletion and P addition in V(D)J recombination: a determinant role of the coding-end sequence

B. Nadel, A. Feeney, 1997, Molecular and cellular biology.

Noncoding transcription within the Igh distal VH region at PAIR elements affects the 3D structure of the Igh locus in pro-B cells

A. Feeney, N. Schork, A. Torkamani, 2012, Proceedings of the National Academy of Sciences.

Reduced receptor editing in lupus-prone MRL/lpr mice

A. Feeney, D. Nemazee, Lisa C. Watson, 2007, The Journal of experimental medicine.

A B-Cell-Specific Enhancer Orchestrates Nuclear Architecture to Generate a Diverse Antigen Receptor Repertoire.

A. Feeney, C. Murre, E. Oltz, 2019, Molecular cell.

Cutting Edge: Proper Orientation of CTCF Sites in Cer Is Required for Normal Jκ-Distal and Jκ-Proximal Vκ Gene Usage

A. Feeney, E. Kleiman, Jeffrey Xu, 2018, The Journal of Immunology.

Localized Gene-Specific Induction of Accessibility to V(D)j Recombination Induced by E2a and Early B Cell Factor in Nonlymphoid Cells

A. Feeney, C. Murre, W. Romanow, 2001, The Journal of experimental medicine.

Compound haploinsufficiencies of Ebf1 and Runx1 genes impede B cell lineage progression

A. Feeney, J. Hagman, M. Cherrier, 2010, Proceedings of the National Academy of Sciences.

TransplantationCorrected with Bone Marrow V(D)J Recombination That Is Partially Counterpart Results in SCID and Defective Targeted Disruption of the Artemis Murine

A. Feeney, S. Bhattacharyya, J. Meneses, 2005 .

VH11 bias and normal V-D-J junctions in SCID B lymphocytes rescued by neonatal T cell transfer.

A. Feeney, D. Mosier, J. Riggs, 1994, Molecular immunology.

An Igh distal enhancer modulates antigen receptor diversity by determining locus conformation

A. Feeney, A. Kenter, N. Baumgarth, 2022, bioRxiv.

CTCF-cohesin complex: architect of chromatin structure regulates V(D)J rearrangement

A. Feeney, Jiyoti Verma-Gaur, 2011, Cell Research.

Junctional Sequences of Fetal T Cell Receptor ß Chains Have Few N Regions

A. Feeney, 2003 .

Repertoire-based selection into the marginal zone compartment during B cell development

A. Feeney, A. Gavin, Lisa C. Watson, 2008, The Journal of experimental medicine.

Targeted Chromatin Profiling Reveals Novel Enhancers in Ig H and Ig L Chain Loci

A. Feeney, M. Artyomov, E. Oltz, 2014, The Journal of Immunology.

Factors that influence formation of B cell repertoire

A. Feeney, 2000, Immunologic research.

Ala-1: murine alloantigen of activated lymphocytes. II. T and B effector cells express ala-1.

A. Feeney, U. Hämmerling, 1977, Journal of immunology.

CHD4 is essential for transcriptional repression and lineage progression in B lymphopoiesis

A. Feeney, Kendra Walton, C. Murre, 2019, Proceedings of the National Academy of Sciences.

Editorial overview. Lymphocyte development.

A. Feeney, A. Corcoran, 2012, Current opinion in immunology.

Newborn, But Not Adult, MRL Mice All Apparent V-D-D-J Rearrangements in Unusual Germline DSP2 Gene Accounts for

A. Feeney, A. Montalbano, E. Kompfner, 2013 .

Unusual Germline DSP2 Gene Accounts for All Apparent V-D-D-J Rearrangements in Newborn, But Not Adult, MRL Mice1

A. Feeney, A. Montalbano, E. Kompfner, 2001, The Journal of Immunology.

Individual V(H) promoters vary in strength, but the frequency of rearrangement of those V(H) genes does not correlate with promoter strength nor enhancer-independence.

A. Feeney, D. Merz, V. A. Love, 2000, Molecular immunology.

MONOCLONAL ANTIBODIES AGAINST HUMAN B CELLS

A. Feeney, D. Mosier, 1982 .

Distribution of human kappa locus IGKV2-29 and IGKV2D-29 alleles in Swedish Caucasians and Hong Kong Chinese

A. Feeney, Y. Lau, L. Padyukov, 2001, Immunogenetics.

Interaction of helper T cells and Lyb5+ B cells responding to phosphorylcholine is MHC-restricted

A. Feeney, D. Mosier, 1984, The Journal of experimental medicine.

Role of homology-directed recombination: predominantly productive rearrangements of Vh81X in newborns but not in adults.

A. Feeney, R. Chukwuocha, 1993, Molecular immunology.

Comparison of junctional diversity in the neonatal and adult immunoglobulin repertoires.

A. Feeney, 1992, International reviews of immunology.

Targeted disruption of the PU.1 gene results in multiple hematopoietic abnormalities.

A. Feeney, M. Klemsz, S. Mckercher, 1996, The EMBO journal.

The Structure and Regulation of the Immunoglobulin Loci

A. Feeney, C. Murre, R. Riblet, 2015 .

E2A proteins are required for proper B cell development and initiation of immunoglobulin gene rearrangements

Ian Krop, Anton Berns, A. Feeney, 1994, Cell.

Both E12 and E47 allow commitment to the B cell lineage.

A. Feeney, S. Shinton, R. Hardy, 1997, Immunity.

B‐cell repertoire formation: role of the recombination signal sequence in non‐random V segment utilization

A. Feeney, Kisani M. Ogwaro, A. Tang, 2000, Immunological reviews.

Terminal Deoxynucleotidyltransferase Deficiency Decreases Autoimmune Disease in Diabetes-Prone Nonobese Diabetic Mice and Lupus-Prone MRL-Faslpr Mice1

A. Feeney, N. Sarvetnick, D. Kono, 2004, The Journal of Immunology.

Epigenetic Enhancer Marks and Transcription Factor Binding Influence Vκ Gene Rearrangement in Pre-B Cells and Pro-B Cells

A. Feeney, E. Kleiman, Salvatore Loguercio, 2018, Front. Immunol..

YY1 plays an essential role at all stages of B-cell differentiation

A. Feeney, Haiqun Jia, E. Kleiman, 2016, Proceedings of the National Academy of Sciences.

Genetic and epigenetic control of V gene rearrangement frequency.

A. Feeney, 2009, Advances in experimental medicine and biology.

Transcription factor Pax5 (BSAP) transactivates the RAG-mediated VH-to-DJH rearrangement of immunoglobulin genes

A. Feeney, M. Cooper, J. Hagman, 2006, Nature Immunology.

Many levels of control of V gene rearrangement frequency

A. Feeney, C. Espinoza, P. Goebel, 2004, Immunological reviews.

E2A and EBF act in synergy with the V(D)J recombinase to generate a diverse immunoglobulin repertoire in nonlymphoid cells.

A. Feeney, J. V. van Dongen, C. Murre, 2000, Molecular cell.

Variable Extent of Lineage-Specificity and Developmental Stage-Specificity of Cohesin and CCCTC-Binding Factor Binding Within the Immunoglobulin and T Cell Receptor Loci

A. Feeney, M. Krangel, Han-Yu Shih, 2018, Front. Immunol..

CCCTC-binding factor (CTCF) and cohesin influence the genomic architecture of the Igh locus and antisense transcription in pro-B cells

Nicholas J. Schork, Ali Torkamani, G. M. Iverson, 2011, Proceedings of the National Academy of Sciences.

Lack of N regions in fetal and neonatal mouse immunoglobulin V-D-J junctional sequences

A. Feeney, A J Feeney, 1990, The Journal of experimental medicine.

Sequence and fine specificity analysis of primary 511 anti-phosphorylcholine antibodies.

A. Feeney, D. Thuerauf, A J Feeney, 1989, Journal of immunology.

Specific H chain junctional diversity may be required for non-T15 antibodies to bind phosphorylcholine.

D E Mosier, A. Feeney, D. Mosier, 1988, Journal of immunology.

Enhancers as regulators of antigen receptor loci three-dimensional chromatin structure

A. Feeney, E. M. Barajas-Mora, 2019, Transcription.

Epigenetic and 3-dimensional regulation of V(D)J rearrangement of immunoglobulin genes.

A. Feeney, Stephanie C Degner-Leisso, 2010, Seminars in immunology.

Reciprocal patterns of methylation of H3K36 and H3K27 on proximal vs. distal IgVH genes are modulated by IL-7 and Pax5

A. Feeney, L. Schaffer, S. Head, 2008, Proceedings of the National Academy of Sciences.

The Extent of Histone Acetylation Correlates with the Differential Rearrangement Frequency of Individual VH Genes in Pro-B Cells1

A. Feeney, C. Espinoza, 2005, The Journal of Immunology.

Genes in Pro-B H Frequency of Individual V with the Differential Rearrangement The Extent of Histone Acetylation Correlates

A. Feeney, C. Espinoza, 2005 .

Unequal VH Gene Rearrangement Frequency Within the Large VH7183 Gene Family Is Not Due to Recombination Signal Sequence Variation, and Mapping of the Genes Shows a Bias of Rearrangement Based on Chromosomal Location1

A. Feeney, R. Riblet, C. Chevillard, 2001, The Journal of Immunology.

Chromosomal Location Bias of Rearrangement Based on Variation , and Mapping of the Genes Shows a Not Due to Recombination Signal Sequence 7183 Gene Family IsHWithin the Large V Gene Rearrangement

A. Feeney, R. Riblet, C. Chevillard, 2001 .

Idiotype Regulation in the Antibody Response to Phosphocholine

A. Feeney, D. Mosier, 1984 .

Tcra gene recombination is supported by a Tcra enhancer- and CTCF-dependent chromatin hub

A. Feeney, N. Galjart, A. Torkamani, 2012, Proceedings of the National Academy of Sciences.

New insights emerge as antibody repertoire diversification meets chromosome conformation

A. Feeney, A. Kenter, 2019, F1000Research.

A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation

A. Feeney, R. Sen, T. Gerasimova, 2015, Genes & development.

CTCF and ncRNA Regulate the Three-Dimensional Structure of Antigen Receptor Loci to Facilitate V(D)J Recombination

A. Feeney, Nancy M. Choi, 2014, Front. Immunol..

Deep Sequencing of the Murine Igh Repertoire Reveals Complex Regulation of Nonrandom V Gene Rearrangement Frequencies

A. Feeney, A. Su, A. Torkamani, 2013, The Journal of Immunology.

Unifying model for molecular determinants of the preselection Vβ repertoire

Andrew I. Su, Maxim N. Artyomov, Eugene M. Oltz, 2013, Proceedings of the National Academy of Sciences.

Nonrandom V Gene Rearrangement Repertoire Reveals Complex Regulation of Igh Deep Sequencing of the Murine

Maxim N. Artyomov, A. Feeney, A. Su, 2013 .

Germline Deletion of Igh 3′ Regulatory Region Elements hs 5, 6, 7 (hs5–7) Affects B Cell-Specific Regulation, Rearrangement, and Insulation of the Igh Locus

A. Feeney, U. Steidl, Jiyoti Verma-Gaur, 2012, The Journal of Immunology.

Epigenetic regulation of antigen receptor gene rearrangement.

A. Feeney, 2011, Current opinion in immunology.

Cutting Edge: Developmental Stage-Specific Recruitment of Cohesin to CTCF Sites throughout Immunoglobulin Loci during B Lymphocyte Development1

A. Feeney, Timothy P. Wong, Stephanie C. Degner, 2009, The Journal of Immunology.

Targeted Disruption of the Artemis Murine Counterpart Results in SCID and Defective V(D)J Recombination That Is Partially Corrected with Bone Marrow Transplantation1

A. Feeney, E. Salido, S. Bhattacharyya, 2005, The Journal of Immunology.

Enhancer-instructed epigenetic landscape and chromatin compartmentalization dictate a primary antibody repertoire protective against specific bacterial pathogens

A. Feeney, V. Nizet, Ming Hu, 2023, Nature Immunology.

Human cord blood kappa repertoire.

A. Feeney, G. Lugo, G. Escuro, 1997, Journal of immunology.

High Frequency of Matrix Attachment Regions and Cut-Like Protein x/CCAAT-Displacement Protein and B Cell Regulator of IgH Transcription Binding Sites Flanking Ig V Region Genes1

A. Feeney, C. Webb, N. Ayers, 2002, The Journal of Immunology.

Flanking Ig V Region Genes Regulator of IgH Transcription Binding Sites x / CCAAT-Displacement Protein and B Cell Regions and Cut-Like Protein High Frequency of Matrix Attachment

A. Feeney, C. Webb, N. Ayers, 2002 .

V(D)J Recombination Frequencies Can Be Profoundly Affected by Changes in the Spacer Sequence1

A. Feeney, M. Oettinger, A. Matthews, 2003, The Journal of Immunology.

New alleles of human immunoglobulin κ J segments IGKJ2 and IGKJ4

A. Feeney, 2000, Immunogenetics.

Sequence of the Spacer in the Recombination Signal Sequence Affects V(D)J Rearrangement Frequency and Correlates with Nonrandom Vκ Usage In Vivo

B. Nadel, A. Feeney, G. Lugo, 1998, The Journal of experimental medicine.

Detection of PreMalignant B-1 Cells in NZB Mice with a Restricted CDR 3 / DFL 16 Region

A. Feeney, F. Mahboudi, L. Arnold, 2013 .

DST4: a new, and probably the last, functional DHgene in the BALB/c mouse

A. Feeney, R. Riblet, 2004, Immunogenetics.

Terminal Deoxynucleotidyl Transferase Deficiency Decreases Autoimmune Disease in MRL-Faslpr Mice1 2

A. Feeney, D. Kono, A. Theofilopoulos, 2001, The Journal of Immunology.

MRL-Deficiency Decreases Autoimmune Disease in Terminal Deoxynucleotidyl Transferase

A. Feeney, D. Kono, A. Theofilopoulos, 2001 .

Detection of Pre-Malifnant B-1 Cells in NZB Mice with a Re-stricted CDR3/DFL16 Region

A. Feeney, F. Mahboudi, L. Arnold, 1997 .

V(H) replacement is unlikely to contribute significantly to receptor editing due to an ineffectual embedded recombination signal sequence.

B. Nadel, A. Feeney, A. Tang, 1998, Molecular immunology.

The Epigenetic Profile of Ig Genes Is Dynamically Regulated during B Cell Differentiation and Is Modulated by Pre-B Cell Receptor Signaling1

A. Feeney, Cheng-Ran Xu, Cheng-ran Xu, 2009, The Journal of Immunology.

New alleles ofIGKV genesA2 andA18 suggest significant humanIGKV locus polymorphism

A. Feeney, M. Cowan, Michael J. Atkinaon, 1996, Immunogenetics.

New alleles of IGKV genes A2 and A18 suggest significant human IGKV locus polymorphism

A. Feeney, M. Atkinson, M. Cowan, 1996, Immunogenetics.

Chromatin accessibility and epigenetic modifications differ between frequently and infrequently rearranging VH genes.

A. Feeney, C. Espinoza, 2007, Molecular immunology.

A defective Vkappa A2 allele in Navajos which may play a role in increased susceptibility to haemophilus influenzae type b disease.

A. Feeney, M. Atkinson, M. Cowan, 1996, The Journal of clinical investigation.

Influence of the V(D)J recombination mechanism on the formation of the primary T and B cell repertoires.

B. Nadel, A. Feeney, K. Victor, 1994, Seminars in immunology.

Predominance of VH-D-JH junctions occurring at sites of short sequence homology results in limited junctional diversity in neonatal antibodies.

A. Feeney, 1992, Journal of immunology.

Influence of coding-end sequence on coding-end processing in V(D)J recombination.

B. Nadel, A. Feeney, Bertrand Nadel, 1995, Journal of immunology.

Analysis of homology-directed recombination in VDJ junctions from cytoplasmic Ig- pre-B cells of newborn mice.

B. Nadel, A. Feeney, R. Chukwuocha, 1995, Journal of immunology.

Limited junctional diversity in kappa light chains. Junctional sequences from CD43+B220+ early B cell progenitors resemble those from peripheral B cells.

A. Feeney, K. Victor, K. Vu, 1994, Journal of immunology.

Junctional sequences of fetal T cell receptor beta chains have few N regions

A. Feeney, Ann J. Feeney, 1991, The Journal of experimental medicine.

Analysis of homology-directed recombination

B. Nadel, A. Feeney, 2001 .

Predominance of the prototypic T15 anti-phosphorylcholine junctional sequence in neonatal pre-B cells.

A. Feeney, 1991, Journal of immunology.

Paucity of V-D-D-J Rearrangements and VH Replacement Events in Lupus Prone and Nonautoimmune TdT−/− and TdT+/+ Mice1

A. Feeney, D. Nemazee, D. Kono, 2006, The Journal of Immunology.

Reprogramming the antigen specificity of B cells using genome-editing technologies

David Nemazee, Ben Murrell, Bryan Briney, 2018, bioRxiv.

Flexible ordering of antibody class switch and V(D)J joining during B-cell ontogeny

A. Feeney, J. Dekker, B. Lajoie, 2013, Genes & Development.

Enhancers in Ig H and Ig L Chain Loci Targeted Chromatin Profiling Reveals Novel

A. Feeney, M. Artyomov, E. Oltz, 2013 .

Expression of Ly-6 on activated T and B cells: Possible identity with Ala-1

A. Feeney, 1978, Immunogenetics.

Ala-1: A murine alloantigen of activated lymphocytes

A. Feeney, U. Hämmerling, 1976, Immunogenetics.

Epigenetic regulation of V(D)J recombination.

A. Feeney, 2010, Seminars in immunology.

Lack of N regions in fetal and neonatal mouse immunoglobulin V-D-J junctional sequences

A. Feeney, 1990, The Journal of experimental medicine.

Flexible ordering of antibody class switch and V(D)J joining during B-cell ontogeny

A. Feeney, J. Dekker, B. Lajoie, 2013, Genes & development.

Escholarship@umms Program in Systems Biology Publications and Presentations Program in Systems Biology Flexible Ordering of Antibody Class Switch and V(d)j Joining during B-cell Ontogeny Repository Citation

A. Feeney, J. Dekker, B. Lajoie, 2022 .

New alleles of human immunoglobulin kappa J segments IGKJ2 and IGKJ4.

A. Feeney, 2000, Immunogenetics.

Reduced receptor editing in lupus-prone MRL/lpr mice.

A. Feeney, D. Nemazee, Lisa C. Watson, 2007, The Journal of experimental medicine.

Deep Sequencing of the Murine Igh Repertoire Reveals Complex Regulation of Nonrandom V Gene Rearrangement Frequencies

Maxim N. Artyomov, A. Feeney, A. Su, 2013, The Journal of Immunology.

Lack of N regions in fetal and neonatal mouse immunoglobulin V-D-J junctional sequences

A. Feeney, 1990, The Journal of experimental medicine.

Restricted IgH V gene usage in the response to the ese epitope on "Hi" sheep red blood cells.

A. Feeney, R. Dutton, R. Riblet, 1992, Journal of immunology.

Mice Fas Lupus-Prone MRL-Diabetes-Prone Nonobese Diabetic Mice and Deficiency Decreases Autoimmune Disease in Terminal Deoxynucleotidyltransferase

A. Feeney, Argyrios N. Theofilopoulos, Marc S. Horwitz, 2004 .

Mice Fas Lupus-Prone MRL-Diabetes-Prone Nonobese Diabetic Mice and Deficiency Decreases Autoimmune Disease in Terminal Deoxynucleotidyltransferase

A. Feeney, Argyrios N. Theofilopoulos, Marc S. Horwitz, 2004 .

Mice Fas Lupus-Prone MRL-Diabetes-Prone Nonobese Diabetic Mice and Deficiency Decreases Autoimmune Disease in Terminal Deoxynucleotidyltransferase

A. Feeney, Argyrios N. Theofilopoulos, Marc S. Horwitz, 2004 .

Mice Fas Lupus-Prone MRL-Diabetes-Prone Nonobese Diabetic Mice and Deficiency Decreases Autoimmune Disease in Terminal Deoxynucleotidyltransferase

A. Feeney, Argyrios N. Theofilopoulos, Marc S. Horwitz, 2004 .

Enhancers within the Ig V Gene Region Orchestrate Chromatin Topology and Regulate V Gene Rearrangement Frequency to Shape the B Cell Receptor Repertoire Specificities.

A. Feeney, E. M. Barajas-Mora, 2023, Journal of immunology.

Repertoire-based selection into the marginal zone compartment during B cell development

A. Feeney, A. Gavin, Lisa C. Watson, 2008, The Journal of experimental medicine.

Cloning and sequencing of cDNA encoding mouse cytohesin-1

A. Feeney, A. O'Rourke, Guia Escuro, 1998, Immunogenetics.

Quantifying chromatin accessibility of individual gene family members by combining ligation-mediated PCR with real-time PCR.

A. Feeney, C. Espinoza, 2006, BioTechniques.