D. Voytas

发表

TAL Effectors: Customizable Proteins for DNA Targeting

A. Bogdanove, D. Voytas, 2011, Science.

Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology

D. Voytas, F. Daboussi, Sophie Leduc, 2014, Nature Communications.

An affinity-based scoring scheme for predicting DNA-binding activities of modularly assembled zinc-finger proteins

Drena Dobbs, Daniel F. Voytas, J. Keith Joung, 2008, Nucleic acids research.

Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences

G. Natsoulis, D. Voytas, J. Boeke, 1993, Cell.

Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence.

D. Voytas, J. Boeke, J. M. Kim, 1998, Genome research.

A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon.

Daniel F Voytas, D. Voytas, J. Baller, 2012, Genome research.

Fanconi anemia gene editing by the CRISPR/Cas9 system.

Christof von Kalle, Jakub Tolar, Richard Gabriel, 2015, Human gene therapy.

In vivo Genome Editing Using High Efficiency TALENs

Colby G Starker, D. Voytas, S. Ekker, 2012, Nature.

Targeted Mutagenesis of the Tomato PROCERA Gene Using Transcription Activator-Like Effector Nucleases1[W]

Vai S. Lor, Colby G Starker, D. Voytas, 2014, Plant Physiology.

High-frequency, precise modification of the tomato genome

D. Voytas, T. Čermák, N. Baltes, 2015, Genome Biology.

Targeting DNA Double-Strand Breaks with TAL Effector Nucleases

Erin L. Doyle, A. Bogdanove, D. Voytas, 2010, Genetics.

The diversity of LTR retrotransposons

D. Voytas, Ericka R. Havecker, Xiang Gao, 2004, Genome Biology.

Plant genome engineering with sequence-specific nucleases.

D. Voytas, 2013, Annual review of plant biology.

Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification.

Ronnie J Winfrey, Jonathan E. Foley, Jeffry D. Sander, 2008, Molecular cell.

High frequency modification of plant genes using engineered zinc finger nucleases

Ronnie J Winfrey, Morgan L. Maeder, J. Joung, 2009, Nature.

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

Erin L. Doyle, A. Bogdanove, D. Voytas, 2011, Nucleic acids research.

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants[OPEN]

Eva Konečná, Daniel F. Voytas, Colby G Starker, 2017, Plant Cell.

Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System.

Daniel F Voytas, Nicholas J Baltes, D. Voytas, 2015, Molecular plant.

RNA targeting with CRISPR–Cas13

Aviv Regev, Feng Zhang, A. Regev, 2017, Nature.

Improved soybean oil quality by targeted mutagenesis of the fatty acid desaturase 2 gene family.

F. Zhang, D. Voytas, A. Juillerat, 2014, Plant biotechnology journal.

RNA targeting with CRISPR-Cas 13 a

A. Regev, E. Lander, J. Joung, 2017 .

Genome Engineering of Crops with Designer Nucleases

D. Voytas, R. Stupar, Shaun J. Curtin, 2012 .

Oligomerized pool engineering (OPEN): an 'open-source' protocol for making customized zinc-finger arrays

Jeffry D. Sander, Morgan L. Maeder, J. Joung, 2009, Nature Protocols.

High‐efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9

Daniel F. Voytas, Yanpeng Wang, Colby G Starker, 2017, The Plant journal : for cell and molecular biology.

ZFN, TALEN and CRISPR-Cas9 mediated homology directed gene insertion in Arabidopsis: A disconnect between somatic and germinal cells.

D. Voytas, J. Baller, Qi-wei Shan, 2018, Journal of genetics and genomics = Yi chuan xue bao.

Novel alleles of rice eIF4G generated by CRISPR/Cas9‐targeted mutagenesis confer resistance to Rice tungro spherical virus

D. Voytas, A. Macovei, T. Čermák, 2018, Plant biotechnology journal.

Rapid and efficient gene modification in rice and Brachypodium using TALENs.

D. Voytas, Kang Zhang, Yanpeng Wang, 2013, Molecular plant.

Comparing Zinc Finger Nucleases and Transcription Activator-Like Effector Nucleases for Gene Targeting in Drosophila

D. Voytas, R. Hawley, D. Grunwald, 2013, G3: Genes, Genomes, Genetics.

Fast-TrACC: A Rapid Method for Delivering and Testing Gene Editing Reagents in Somatic Plant Cells

D. Voytas, Michael F. Maher, Ryan A. Nasti, 2021, Frontiers in Genome Editing.

Retroviruses in plants?

D. Voytas, B. Peterson-Burch, D. Wright, 2000, Trends in genetics : TIG.

Optimized dCas9 Programmable Transcription Activators for Plants

Stephen C. Heinsch, M. Smanski, D. Voytas, 2022, bioRxiv.

Targeted mutagenesis for functional analysis of gene duplication in legumes.

Justin E. Anderson, Colby G Starker, D. Voytas, 2013, Methods in molecular biology.

Nuclear-organelle interactions: the immutans variegation mutant of Arabidopsis is plastid autonomous and impaired in carotenoid biosynthesis.

D. Voytas, S. Rodermel, C. Jiang, 1994, The Plant journal : for cell and molecular biology.

Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration.

Colby G Starker, D. Voytas, J. Tytell, 2016, Cell systems.

Erratum: Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration (Cell Systems (2016) 3(3) (252–263.e8)(S2405471216302629)(10.1016/j.cels.2016.08.007))

Colby G Starker, D. Voytas, J. Tytell, 2016 .

The pheromone response pathway activates transcription of Ty5 retrotransposons located within silent chromatin of Saccharomyces cerevisiae

D. Voytas, N. Ke, P. A. Irwin, 1997, The EMBO journal.

Silent chromatin determines target preference of the Saccharomyces retrotransposon Ty5.

D. Voytas, S. Zou, 1997, Proceedings of the National Academy of Sciences of the United States of America.

Tailor-made mutations in Arabidopsis using zinc finger nucleases.

Colby G Starker, D. Voytas, F. Zhang, 2014, Methods in molecular biology.

Targeted Mutagenesis of Arabidopsis thaliana Using Engineered TAL Effector Nucleases

D. Voytas, Yiping Qi, Yong Zhang, 2013, G3: Genes, Genomes, Genetics.

Detection and quantitation of radiolabeled proteins in gels and blots.

D. Voytas, N. Ke, 2001, Current protocols in cell biology.

Multiple non-LTR retrotransposons in the genome of Arabidopsis thaliana.

D. Voytas, H. Goodman, B. Hauge, 1996, Genetics.

Arabidopsis and cotton (Gossypium) as models for studying copia-like retrotransposon evolution

D. Voytas, 2004, Genetica.

Genome editing as a tool to achieve the crop ideotype and de novo domestication of wild relatives: Case study in tomato.

D. Voytas, L. Peres, T. Čermák, 2017, Plant science : an international journal of experimental plant biology.

RNA viral vectors to modulate gene expression RNA viral vectors to rapidly elucidate the relationship between gene expression and phenotype

D. Voytas, Arjun Khakhar, Cecily Wang, 2021 .

Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases

D. Voytas, N. Baltes, D. Douches, 2016, Front. Plant Sci..

Highly efficient gene tagging in the bryophyte Physcomitrella patens using the tobacco (Nicotiana tabacum) Tnt1 retrotransposon.

D. Voytas, M. Grandbastien, J. Casacuberta, 2016, The New phytologist.

Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia.

D. Voytas, R. Hobza, B. Vyskot, 2019, New biotechnology.

Targeting integration of the Saccharomyces Ty5 retrotransposon.

D. Voytas, Troy L. Brady, Clarice L Schmidt, 2008, Methods in molecular biology.

cDNA of the Yeast Retrotransposon Ty5 Preferentially Recombines with Substrates in Silent Chromatin

D. Voytas, N. Ke, 1999, Molecular and Cellular Biology.

In vivo genome editing using a high-efficiency TALEN system

D. Voytas, G. Colby, S. Ekker, 2020 .

ZFNGenome: A comprehensive resource for locating zinc finger nuclease target sites in model organisms

Jeffry D. Sander, J. Joung, D. Voytas, 2011, BMC Genomics.

Constructing nested deletions for use in DNA sequencing.

D. Voytas, B. Slatko, B. T. Nixon, 2001, Current protocols in molecular biology.

Direct delivery and fast-treated Agrobacterium co-culture (Fast-TrACC) plant transformation methods for Nicotiana benthamiana

D. Voytas, Colby G. Starker, Michael F. Maher, 2022, Nature Protocols.

Plant gene editing through de novo induction of meristems

D. Voytas, M. Clark, Colby G. Starker, 2019, Nature Biotechnology.

A single amino acid change in the yeast retrotransposon Ty5 abolishes targeting to silent chromatin.

D. Voytas, X. Gai, 1998, Molecular cell.

Rapid flux in plant genomes

D. Voytas, G. Naylor, 1998, Nature Genetics.

Potential impacts of genome editing on climate adaptation and mitigation

D. Voytas, 2022 .

An Extensible Vector Toolkit and Parts Library for Advanced Engineering of Plant Genomes

D. Voytas, J. Kumar, Colby G. Starker, 2022, bioRxiv.

Retroelements in Genome Organization

D. Voytas, 1996, Science.

Targeting of the PlzfGene in the Rat by Transcription Activator-Like Effector Nuclease Results in Caudal Regression Syndrome in SpontaneouslyHypertensive Rats

D. Voytas, Z. Izsvák, V. Zídek, 2020 .

Targeting of the Plzf Gene in the Rat by Transcription Activator-Like Effector Nuclease Results in Caudal Regression Syndrome in Spontaneously Hypertensive Rats

D. Voytas, Z. Izsvák, V. Zídek, 2016, PloS one.

Advancing Crop Transformation in the Era of Genome Editing[OPEN]

Peggy G. Lemaux, Virginia Walbot, Daniel F. Voytas, 2016, Plant Cell.

Defining the Parameters to Improve Plant Regeneration with Developmental Regulators

D. Voytas, B. Blackman, Michael F. Maher, 2022, bioRxiv.

Editing through infection

D. Voytas, S. Dinesh-Kumar, 2020, Nature Plants.

Non-transgenic Plant Genome Editing Using Purified Sequence-Specific Nucleases.

D. Voytas, N. Baltes, Andrew P Coffman, 2015, Molecular plant.

Heat Shock-Based Activation of Systemic Acquired Resistance in Arabidopsis thaliana

D. Voytas, J. Cody, Adhvaith Sridhar, 2022 .

Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

Erin L. Doyle, A. Bogdanove, D. Voytas, 2011, Nucleic Acids Research.

Analyzing Plant Gene Targeting Outcomes and Conversion Tracts with Nanopore Sequencing

D. Voytas, Paul A. Atkins, M. E. Gamo, 2021, International journal of molecular sciences.

Genome Editing for Crop Improvement – Applications in Clonally Propagated Polyploids With a Focus on Potato (Solanum tuberosum L.)

D. Voytas, C. Buell, D. Douches, 2018, Front. Plant Sci..

De novo domestication of wild tomato using genome editing

D. Voytas, J. Kudla, L. Freschi, 2018, Nature Biotechnology.

Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil

D. Voytas, N. Baltes, B. Clasen, 2016, BMC Plant Biology.

Conferring resistance to geminiviruses with the CRISPR–Cas prokaryotic immune system

D. Voytas, D. Bisaro, E. Konečná, 2015, Nature Plants.

Targeted mutagenesis in wheat microspores using CRISPR/Cas9

D. Voytas, Caixia Gao, Sateesh Kagale, 2018, Scientific Reports.

Transcription Activator-Like Effector Nucleases Enable Efficient Plant Genome Engineering1[W][OA]

Daniel F. Voytas, Adam J. Bogdanove, Yiping Qi, 2012, Plant Physiology.

A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation1[OPEN]

Daniel F. Voytas, Yiping Qi, Tzung-Fu Hsieh, 2015, Plant Physiology.

Plant genome engineering from lab to field—a Keystone Symposia report

D. Voytas, S. Jacobsen, E. Fridman, 2021, Annals of the New York Academy of Sciences.

Attaining the promise of plant gene editing at scale

D. Voytas, Ryan A. Nasti, 2021, Proceedings of the National Academy of Sciences.

Precision Genome Engineering and Agriculture: Opportunities and Regulatory Challenges

Daniel F. Voytas, D. Voytas, Caixia Gao, 2014, PLoS biology.

Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil

D. Voytas, N. Baltes, B. Clasen, 2016, BMC Plant Biology.

Gibberellin-Induced Changes in the Populations of Translatable mRNAs and Accumulated Polypeptides in Dwarfs of Maize and Pea.

D. Voytas, F. Ausubel, J. Chory, 1987, Plant physiology.

Evaluation of TCR Gene Editing Achieved by TALENs, CRISPR/Cas9, and megaTAL Nucleases.

Christof von Kalle, Jakub Tolar, Richard Gabriel, 2016, Molecular therapy : the journal of the American Society of Gene Therapy.

TAL Effector Specificity for base 0 of the DNA Target Is Altered in a Complex, Effector- and Assay-Dependent Manner by Substitutions for the Tryptophan in Cryptic Repeat –1

Erin L. Doyle, P. Bradley, A. Bogdanove, 2013, PloS one.

Compact designer TALENs for efficient genome engineering

Daniel F. Voytas, George H. Silva, Feng Zhang, 2013, Nature Communications.

Multiple molecular determinants for retrotransposition in a primer tRNA

D. Voytas, J. Boeke, A. Byström, 1995, Molecular and cellular biology.

RNA Viral Vectors for Accelerating Plant Synthetic Biology

D. Voytas, Arjun Khakhar, 2021, Frontiers in Plant Science.

Ty1 and Ty5 of Saccharomyces cerevisiae

D. Voytas, J. Boeke, 2002 .

The yeast retrotransposon Ty5 uses the anticodon stem-loop of the initiator methionine tRNA as a primer for reverse transcription.

D. Voytas, J. Boeke, X. Gao, 1999, RNA.

SplitTester : software to identify domains responsible for functional divergence in protein family

Xiang Gao, Daniel F. Voytas, Xun Gu, 2005, BMC Bioinformatics.

MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants

D. Voytas, M. Kantar, R. Stupar, 2015, G3: Genes, Genomes, Genetics.

The Saccharomyces retrotransposon Ty5 integrates preferentially into regions of silent chromatin at the telomeres and mating loci.

D. Voytas, N. Ke, S. Zou, 1996, Genes & development.

SIRE1, an endogenous retrovirus family from Glycine max, is highly homogeneous and evolutionarily young.

Daniel F Voytas, D. Voytas, Ericka R. Havecker, 2003, Molecular biology and evolution.

Athila4 of Arabidopsis and Calypso of soybean define a lineage of endogenous plant retroviruses.

David A Wright, Daniel F Voytas, D. Voytas, 2002, Genome research.

Chromodomains direct integration of retrotransposons to heterochromatin.

Daniel F Voytas, Henry L Levin, D. Voytas, 2008, Genome research.

Copia-like retrotransposable element evolution in diploid and polyploid cotton (Gossypium L.)

D. Voytas, J. Wendel, P. Vanderwiel, 1993, Journal of Molecular Evolution.

Translational recoding signals between gag and pol in diverse LTR retrotransposons.

D. Voytas, J. F. Atkins, P. Baranov, 2003, RNA.

ZiFiT (Zinc Finger Targeter): an updated zinc finger engineering tool

Drena Dobbs, Daniel F. Voytas, J. Keith Joung, 2010, Nucleic Acids Res..

The IMMUTANS Variegation Locus of Arabidopsis Defines a Mitochondrial Alternative Oxidase Homolog That Functions during Early Chloroplast Biogenesis

D. Voytas, Dongying Wu, S. Rodermel, 1999, Plant Cell.

Simple Methods for Generating and Detecting Locus-Specific Mutations Induced with TALENs in the Zebrafish Genome

Daniel F. Voytas, D. Voytas, Allison M. Weis, 2012, PLoS genetics.

TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction

Volker Brendel, John K. VanDyk, Erin L. Doyle, 2012, Nucleic Acids Res..

TALEN-engineered AR gene rearrangements reveal endocrine uncoupling of androgen receptor in prostate cancer

Michael D. Nyquist, D. Voytas, R. Vessella, 2013, Proceedings of the National Academy of Sciences.

Genomic neighborhoods for Arabidopsis retrotransposons: a role for targeted integration in the distribution of the Metaviridae

Dan Nettleton, Daniel F Voytas, D. Voytas, 2004, Genome Biology.

Genes of the Pseudoviridae (Ty1/copia retrotransposons).

D. Voytas, B. Peterson-Burch, Brooke Peterson-Burch, 2002, Molecular biology and evolution.

Tagging chromatin with retrotransposons: target specificity of the Saccharomyces Ty5 retrotransposon changes with the chromosomal localization of Sir3p and Sir4p.

D. Voytas, Y. Zhu, D. Wright, 1999, Genes & development.

Targeting a single alternative polyadenylation site coordinately blocks expression of androgen receptor mRNA splice variants in prostate cancer.

Michael D. Nyquist, D. Voytas, Rendong Yang, 2017, Cancer research.

Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins.

D. Voytas, D. Wright, D. Wright, 1998, Genetics.

Genome Editing of Plants

D. Voytas, D. D. Songstad, D. F. Voytas, 2017 .

An RNA polymerase III subunit determines sites of retrotransposon integration

D. Voytas, A. Saïb, M. Werner, 2015, Science.

Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatin.

D. Voytas, Troy L. Brady, Weiwu Xie, 2007, Molecular cell.

Erratum: Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting (Nucleic Acids Research (2011) 39 (e82) DOI: 10.1093/nar/gkr218)

Li Wang, Erin L. Doyle, Daniel F. Voytas, 2011 .

Zinc Finger Database (ZiFDB) v2.0: a comprehensive database of C2H2 zinc fingers and engineered zinc finger arrays

Daniel F. Voytas, Fengli Fu, D. Voytas, 2012, Nucleic Acids Res..

Selection-Free Zinc-Finger Nuclease Engineering by Context-Dependent Assembly (CoDA)

Feng Zhang, Drena Dobbs, Daniel F. Voytas, 2010, Nature Methods.

A CRISPR–Cpf1 system for efficient genome editing and transcriptional repression in plants

Tao Zhang, Yiping Qi, Levi G Lowder, 2017, Nature Plants.

Gene editing and its application for hematological diseases

D. Voytas, J. Tolar, Mark J. Osborn, 2016, International Journal of Hematology.

Access to DNA establishes a secondary target site bias for the yeast retrotransposon Ty5

D. Voytas, J. Baller, Jiquan Gao, 2011, Proceedings of the National Academy of Sciences.

Targeting of the Yeast Ty5 Retrotransposon to Silent Chromatin Is Mediated by Interactions between Integrase and Sir4p

D. Voytas, R. Sternglanz, D. Zappulla, 2001, Molecular and Cellular Biology.

Expression and Processing of Proteins Encoded by the Saccharomyces Retrotransposon Ty5

D. Voytas, Phillip A. Irwin, 2001, Journal of Virology.

The Saccharomyces Ty5 retrotransposon family is associated with origins of DNA replication at the telomeres and the silent mating locus HMR.

D. Voytas, D. Wright, S. Zou, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Comparing ZFNs and TALENs for Gene Targeting in Drosophila

D. Voytas, R. Hawley, D. Grunwald, 2013 .

Mutations in the Arabidopsis VAR2 locus cause leaf variegation due to the loss of a chloroplast FtsH protease.

D. Voytas, S. Rodermel, Y. Choi, 2000, The Plant journal : for cell and molecular biology.

TALEN-mediated editing of the Mouse Y Chromosome

A. Bogdanove, D. Voytas, D. Page, 2013, Nature Biotechnology.

The Sireviruses, a Plant-Specific Lineage of the Ty1/copia Retrotransposons, Interact with a Family of Proteins Related to Dynein Light Chain 8[w]

D. Voytas, Ericka R. Havecker, Xiang Gao, 2005, Plant Physiology.

The soybean retroelement SIRE 1 uses stop codon suppression to express its envelope‐like protein

D. Voytas, Ericka R. Havecker, 2003, EMBO reports.

Efficient TALEN-mediated gene knockout in livestock

Daniel F. Voytas, Scott C. Fahrenkrug, Wenfang Tan, 2012, Proceedings of the National Academy of Sciences.

A copia-like transposable element family in Arabidopsis thaliana

D. Voytas, F. Ausubel, 1988, Nature.

Allele exchange at the EPSPS locus confers glyphosate tolerance in cassava

D. Voytas, R. Chauhan, N. Taylor, 2018, Plant biotechnology journal.

A Single Transcript CRISPR-Cas9 System for Efficient Genome Editing in Plants.

Yiping Qi, Daniel F Voytas, Yong Zhang, 2016, Molecular plant.

Low‐gluten, nontransgenic wheat engineered with CRISPR/Cas9

Daniel F. Voytas, Francisco Barro, D. Voytas, 2017, Plant biotechnology journal.

Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements.

Daniel F Voytas, Zoltán Ivics, D. Voytas, 2002, Journal of molecular biology.

Evaluation of Methods to Assess in vivo Activity of Engineered Genome-Editing Nucleases in Protoplasts

Dae Kwan Ko, D. Voytas, C. Buell, 2019, Front. Plant Sci..

Threshold-dependent repression of SPL gene expression by miR156/miR157 controls vegetative phase change in Arabidopsis thaliana

D. Voytas, B. Meyers, R. Poethig, 2018, PLoS genetics.

Detection and Quantitation of Radiolabeled Proteins and DNA in Gels and Blots

D. Voytas, N. Ke, 2002, Current protocols in immunology.

Robust Transcriptional Activation in Plants Using Multiplexed CRISPR-Act2.0 and mTALE-Act Systems.

D. Voytas, Aimee A. Malzahn, Levi G. Lowder, 2017, Molecular plant.

Zinc Finger Targeter (ZiFiT): an engineered zinc finger/target site design tool

Daniel F. Voytas, J. Keith Joung, Jeffry D. Sander, 2007, Nucleic Acids Res..

Controlling integration specificity of a yeast retrotransposon

D. Voytas, P. Fuerst, Junbiao Dai, 2003, Proceedings of the National Academy of Sciences of the United States of America.

High-frequency, precise modification of the tomato genome

D. Voytas, T. Čermák, N. Baltes, 2015, Genome Biology.

Evaluation of the mature grain phytase candidate HvPAPhy_a gene in barley (Hordeum vulgare L.) using CRISPR/Cas9 and TALENs

D. Voytas, H. Brinch-Pedersen, I. Holme, 2017, Plant Molecular Biology.

Gene expression atlas for the food security crop cassava

Jeffrey C. Berry, D. Voytas, D. Chitwood, 2017, The New phytologist.

Gene expression analysis provides insight into the physiology of the important staple food crop cassava

Jeffrey C. Berry, D. Voytas, D. Chitwood, 2016, bioRxiv.

DNA Replicons for Plant Genome Engineering[W][OPEN]

D. Voytas, T. Čermák, N. Baltes, 2014, Plant Cell.

High-frequency homologous recombination in plants mediated by zinc-finger nucleases.

David A Wright, Ronnie J Winfrey, Jeffrey A Townsend, 2005, The Plant journal : for cell and molecular biology.

Improving cold storage and processing traits in potato through targeted gene knockout.

Feng Zhang, Daniel F Voytas, Nicholas J Baltes, 2016, Plant biotechnology journal.

Generation and Inheritance of Targeted Mutations in Potato (Solanum tuberosum L.) Using the CRISPR/Cas System

D. Voytas, D. Douches, Paul A. Atkins, 2015, PloS one.

Multiplexed heritable gene editing using RNA viruses and mobile single guide RNAs

Daniel F. Voytas, D. Voytas, U. Nagalakshmi, 2020, Nature Plants.

Overcoming bottlenecks in plant gene editing.

Daniel F Voytas, D. Voytas, Paul Ap Atkins, 2020, Current opinion in plant biology.

Targeted Mutagenesis of Duplicated Genes in Soybean with Zinc-Finger Nucleases1[W][OA]

Feng Zhang, Drena Dobbs, Daniel F. Voytas, 2011, Plant Physiology.

Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways

D. Voytas, J. Baller, Spencer C Cleland, 2013, Genome research.

Enabling plant synthetic biology through genome engineering.

D. Voytas, N. Baltes, 2015, Trends in biotechnology.

Editorial Prerogative and the Plant Genome.

D. Voytas, 2016, Journal of genetics and genomics = Yi chuan xue bao.

TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants

D. Voytas, H. Brinch-Pedersen, I. Holme, 2013, Plant Molecular Biology.

Targeting G with TAL Effectors: A Comparison of Activities of TALENs Constructed with NN and NK Repeat Variable Di-Residues

Daniel F. Voytas, Adam J. Bogdanove, Philip Bradley, 2012, PloS one.

Yeast retrotransposons and tRNAs.

D. Voytas, J. Boeke, Daniel F. Voytas, 1993, Trends in genetics : TIG.

Targeted mutagenesis in Arabidopsis using zinc-finger nucleases.

D. Voytas, Feng Zhang, 2011, Methods in molecular biology.

High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases

Feng Zhang, Drena Dobbs, Erica Unger-Wallace, 2010, Proceedings of the National Academy of Sciences.

TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins.

Erin L. Doyle, Daniel F Voytas, A. Bogdanove, 2013, Trends in cell biology.

CEN plasmid segregation is destabilized by tethered determinants of Ty5 integration specificity: a role for double-strand breaks in CEN antagonism

D. Voytas, P. Fuerst, 2003, Chromosoma.

copia-like retrotransposons are ubiquitous among plants.

D. Voytas, M. P. Cummings, F. Ausubel, 1992, Proceedings of the National Academy of Sciences of the United States of America.

Fine Mapping of Leaf Trichome Density Revealed a 747-kb Region on Chromosome 1 in Cold-Hardy Hybrid Wine Grape Populations

D. Voytas, M. Clark, L. Cadle-Davidson, 2021, Frontiers in Plant Science.

Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly

Drena Dobbs, David A Wright, Ronnie J Winfrey, 2006, Nature Protocols.

Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences

Xiaohong Li, Drena Dobbs, Daniel F. Voytas, 2010, BMC Bioinformatics.

Zinc Finger Database (ZiFDB): a repository for information on C2H2 zinc fingers and engineered zinc-finger arrays

Drena Dobbs, Daniel F. Voytas, Leslie L. Miller, 2008, Nucleic Acids Res..

TALEN-based gene correction for epidermolysis bullosa.

Christof von Kalle, Jakub Tolar, Richard Gabriel, 2013, Molecular therapy : the journal of the American Society of Gene Therapy.

A superfamily of Arabidopsis thaliana retrotransposons.

D. Voytas, M. P. Cummings, F. Ausubel, 1991, Genetics.

High frequency cDNA recombination of the saccharomyces retrotransposon Ty5: The LTR mediates formation of tandem elements.

D. Voytas, N. Ke, 1997, Genetics.

The structure, distribution and evolution of the Ta1 retrotransposable element family of Arabidopsis thaliana.

D. Voytas, M. P. Cummings, F. Ausubel, 1990, Genetics.

Targeted Mutagenesis in Plant Cells through Transformation of Sequence-Specific Nuclease mRNA

D. Voytas, N. Baltes, B. Clasen, 2016, PloS one.

Retrotransposon Target Site Selection by Imitation of a Cellular Protein

D. Voytas, P. Fuerst, Troy L. Brady, 2007, Molecular and Cellular Biology.

Targeted Deletion and Inversion of Tandemly Arrayed Genes in Arabidopsis thaliana Using Zinc Finger Nucleases

Jeffry D. Sander, J. Joung, D. Voytas, 2013, G3: Genes, Genomes, Genetics.

Ty5 gag Mutations Increase Retrotransposition and Suggest a Role for Hydrogen Bonding in the Function of the Nucleocapsid Zinc Finger

D. Voytas, X. Gai, Xiang Gao, 2002, Journal of Virology.

Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration.

Zhuo Gan, Gaudenz Danuser, Liya Ding, 2016, Cell systems.

A CRISPR–Cpf1 system for efficient genome editing and transcriptional repression in plants

Tao Zhang, Daniel F. Voytas, Yiping Qi, 2017, Nature Plants.

Protein expression and gene editing in monocots using foxtail mosaic virus vectors

D. Voytas, E. Konečná, S. Whitham, 2019, Plant direct.

VipariNama: RNA viral vectors to rapidly elucidate the relationship between gene expression and phenotype

D. Voytas, Arjun Khakhar, Cecily Wang, 2021, Plant physiology.

Downregulation of Plzf Gene Ameliorates Metabolic and Cardiac Traits in the Spontaneously Hypertensive Rat

D. Voytas, Z. Izsvák, V. Zídek, 2017, Hypertension.

Genome Engineering and Agriculture: Opportunities and Challenges.

Daniel F Voytas, Nicholas J Baltes, Javier Gil-Humanes, 2017, Progress in molecular biology and translational science.

Validating Genome-Wide Association Candidates Controlling Quantitative Variation in Nodulation1[OPEN]

D. Voytas, N. Young, R. Stupar, 2017, Plant Physiology.

Unexpected failure rates for modular assembly of engineered zinc fingers

Toni Cathomen, Cherie L Ramirez, Jonathan E Foley, 2008, Nature Methods.

Retrotransposon vectors for gene delivery in plants

D. Voytas, J. Rajagopal, Yi Hou, 2010, Mobile DNA.

Synthetic genomes engineered by SCRaMbLEing

D. Voytas, Feng Zhang, 2018, Science China Life Sciences.

Optimization of multiplexed CRISPR/Cas9 system for highly efficient genome editing in Setaria viridis.

Peter A. Crisp, D. Voytas, N. Springer, 2020, The Plant journal : for cell and molecular biology.

Genomics: Fighting fire with fire

D. Voytas, 2008, Nature.

A eukaryotic gene family related to retroelement integrases.

D. Voytas, Xiang Gao, 2005, Trends in genetics : TIG.

Agarose gel electrophoresis.

D. Voytas, 2000, Current protocols in molecular biology.

The ULK1 complex mediates MTORC1 signaling to the autophagy initiation machinery via binding and phosphorylating ATG14

D. Voytas, B. Moriarity, R. Nho, 2016, Autophagy.

Essential nucleotide- and protein-dependent functions of Actb/β-actin

D. Voytas, J. Ervasti, A. Lindsay, 2018, Proceedings of the National Academy of Sciences.

A Defect in DNA Ligase4 Enhances the Frequency of TALEN-Mediated Targeted Mutagenesis in Rice1[OPEN]

D. Voytas, K. Osakabe, S. Toki, 2015, Plant Physiology.

Running head : 1 Efficient targeted mutagenesis in lig 4 rice

D. Voytas, K. Osakabe, S. Toki, 2015 .

Optimization of multiplexed CRISPR/Cas9 system for highly efficient genome editing in Setaria viridis

Peter A. Crisp, D. Voytas, N. Springer, 2020, bioRxiv.

Histone H2AX and the small RNA pathway modulate both non-homologous end-joining and homologous recombination in plants.

D. Voytas, J. Baller, Yiping Qi, 2016, Mutation research.

Prerogative and the Plant Genome 1 2

D. Voytas, 2016 .

The Saccharomyces retrotransposon Ty5 influences the organization of chromosome ends.

D. Voytas, S. Zou, J. M. Kim, 1996, Nucleic acids research.

Building customizable auto-luminescent luciferase-based reporters in plants

D. Voytas, T. Imaizumi, Arjun Khakhar, 2019, bioRxiv.

VipariNama: RNA vectors to rapidly reprogram plant morphology and metabolism

D. Voytas, Arjun Khakhar, Cecily Wang, 2020, bioRxiv.

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula

D. Voytas, R. Stupar, A. Eamens, 2017, Plant biotechnology journal.

Multiplexed, targeted gene editing in Nicotiana benthamiana for glyco-engineering and monoclonal antibody production.

Daniel F Voytas, Feng Zhang, D. Voytas, 2016, Plant biotechnology journal.

Heritable base-editing in Arabidopsis using RNA viral vectors

D. Voytas, U. Nagalakshmi, S. Dinesh-Kumar, 2022, Plant physiology.

High-efficiency multiplex biallelic heritable editing in Arabidopsis using an RNA virus

D. Voytas, U. Nagalakshmi, S. Dinesh-Kumar, 2022, bioRxiv.

Detection and Quantitation of Radiolabeled Proteins and DNA in Gels and Blots

D. Voytas, N. Ke, 1999, Current protocols in molecular biology.

Welcome to Mobile DNA

D. Voytas, T. Eickbush, N. Craig, 2010, Mobile DNA.

Regulate genome-edited products, not genome editing itself

Dana Carroll, Alison L. Van Eenennaam, Jon Seger, 2016, Nature Biotechnology.

The YABBY gene SHATTERING1 controls activation rather than patterning of the abscission zone in Setaria viridis.

D. Voytas, A. Doust, E. Kellogg, 2023, The New phytologist.

Yeast retrotransposon revealed

Daniel F. Voytas, Jef D. Boeke, D. Voytas, 1992, Nature.

DNA Binding Made Easy

J. Joung, D. Voytas, 2009, Science.

Technology Turbocharges Functional Genomics[OPEN]

D. Voytas, C. R. Buell, 2017, Plant Cell.

Efficient design and assembly of custom TALENs using the Golden Gate platform.

Daniel F Voytas, Tomas Cermak, Colby G Starker, 2015, Methods in molecular biology.

Opportunities and Regulatory Challenges for Genome Engineering in Agriculture

D. Voytas, 2015 .

A TALE of two nucleases: gene targeting for the masses?

Daniel F Voytas, D. Voytas, S. Ekker, 2011, Zebrafish.

Efficient TALEN-mediated gene knockout in livestock

D. Voytas, C. Whitelaw, S. Lillico, 2012, Proceedings of the National Academy of Sciences.

Rapid and efficient gene modification in rice and Brachypodium using TALENs.

D. Voytas, Kang Zhang, Yanpeng Wang, 2013, Molecular plant.

Engineered TAL Effector Proteins: Versatile Reagents for Manipulating Plant Genomes

D. Voytas, Michelle L. Christian, 2015 .

Evaluation of TCR Gene Editing Achieved by TALENs, CRISPR/Cas9, and megaTAL Nucleases.

Beau R. Webber, C. von Kalle, D. Voytas, 2016, Molecular Therapy.

Advancing Crop Transformation in the Era of Genome Editing[OPEN]

Nathan M. Springer, D. Voytas, V. Walbot, 2016, Plant Cell.

Viruses as vectors for the delivery of gene-editing reagents

D. Voytas, Evan E. Ellison, James C. Chamness, 2021, Genome editing for precision crop breeding.

Targeted mutagenesis in wheat microspores using CRISPR/Cas9

Daniel F Voytas, Pankaj Bhowmik, D. Voytas, 2018, Scientific Reports.

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants[OPEN]

D. Voytas, Shaun J. Curtin, T. Čermák, 2017, Plant Cell.

Transcription Activator-Like Effector Nucleases Enable Efficient Plant Genome Engineering1[W][OA]

A. Bogdanove, D. Voytas, Xiaohong Li, 2012, Plant Physiology.

Breakthrough Technologies Transcription Activator-Like Effector Nucleases Enable

A. Bogdanove, D. Voytas, Xiaohong Li, 2012 .

Viral delivery of recombinases to activate heritable genetic switches in plants

D. Voytas, Anna J. Cruz, Jon P. Cody, 2024, bioRxiv.

Zinc Finger Targeter (ZiFiT): an engineered zinc finger/target site design tool

Jeffry D. Sander, J. Joung, D. Voytas, 2007, Nucleic Acids Res..

Multiplexed heritable gene editing using RNA viruses and mobile single guide RNAs

D. Voytas, S. Dinesh-Kumar, M. E. Gamo, 2020, Nature Plants.

Synthetic genomes engineered by SCRaMbLEing

D. Voytas, Feng Zhang, 2018, Science China Life Sciences.

Mouse Genome Engineering Using Designer Nucleases

D. Voytas, T. Čermák, P. Pelczar, 2014, Journal of visualized experiments : JoVE.

Reply to “Genome editing with modularly assembled zinc-finger nucleases”

Dana Carroll, D. Voytas, T. Cathomen, 2010, Nature Methods.