S. Yooseph
发表
Laurie J. Heyer,
L. Heyer,
S. Kruglyak,
1999,
Genome research.
Randall A. Bolanos,
Xiangqun H. Zheng,
Bjarni V. Halldórsson,
2004,
Proceedings of the National Academy of Sciences of the United States of America.
Timothy B. Stockwell,
William H. Majoros,
Helen M. Moore,
2001,
Science.
Katherine H. Huang,
Daniel D. Sommer,
Zhengyuan O. Wang,
2012,
Nature.
Shibu Yooseph,
Vineet Bafna,
Dan Gusfield,
2004,
J. Comput. Biol..
Benjamin J. Raphael,
Susan S. Taylor,
David A W Soergel,
2007,
PLoS biology.
Katherine H. Huang,
Daniel D. Sommer,
Zhengyuan O. Wang,
2012,
Nature.
S. Yooseph,
P. Dorrestein,
K. Nelson,
2014,
Proceedings of the National Academy of Sciences.
A. Halpern,
G. Sutton,
S. Kravitz,
2007,
PLoS biology.
A. Halpern,
G. Sutton,
M. Frazier,
2008,
PloS one.
Lynn K. Carmichael,
N. Lennon,
B. Haas,
2012,
PloS one.
C. Hutchison,
Nacyra Assad-García,
Hamilton O. Smith,
2006,
Proceedings of the National Academy of Sciences of the United States of America.
William H. Majoros,
Randall A. Bolanos,
Ashwinikumar K. Naik,
2002,
Science.
Natalia N. Ivanova,
Donovan H. Parks,
Devin F R Doud,
2017,
Nature Biotechnology.
S. Yooseph,
B. Methé,
M. Bihan,
2012,
PloS one.
The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data
S. Kravitz,
S. Yooseph,
Johannes Goll,
2010,
Standards in genomic sciences.
Ruben E. Valas,
A. Halpern,
S. Yooseph,
2011,
The ISME Journal.
J. Venter,
S. Yooseph,
Niels Klitgord,
2015,
Proceedings of the National Academy of Sciences.
Natalia N. Ivanova,
Donovan H. Parks,
Devin F R Doud,
2018,
Nature Biotechnology.
Shibu Yooseph,
Victor Seguritan,
Rohit Loomba,
2017,
Cell metabolism.
Shibu Yooseph,
Mark D. Adams,
Daniel Brami,
2013,
PloS one.
Benjamin J. Raphael,
Susan S. Taylor,
David A W Soergel,
2007
.
K. Wise,
J. Glass,
S. Yooseph,
2010,
BMC Genomics.
Russell Schwartz,
Daniel H. Huson,
Shibu Yooseph,
2001,
Proceedings IEEE 2001 Symposium on Parallel and Large-Data Visualization and Graphics (Cat. No.01EX520).
Eoin L. Brodie,
S. Yooseph,
U. Karaoz,
2014,
Journal of Virology.
Natalia N. Ivanova,
Devin F R Doud,
B. Birren,
2015,
Nature Biotechnology.
Maria Luisa Bonet,
S. Yooseph,
T. Warnow,
1995
.
Edward W. Lee,
E. Zoetendal,
S. Yooseph,
2013,
PloS one.
S. Yooseph,
Sahar Tavakoli,
2022,
J. Comput. Biol..
S. Yooseph,
S. Rajasekaran,
1993
.
S. Yooseph,
S. Rajagopala,
M. Boukhvalova,
2020,
Animal microbiome.
K. Pollard,
S. Yooseph,
J. Ladau,
2019
.
Anders F. Andersson,
J. Venter,
S. Yooseph,
2014,
PloS one.
S. Yooseph,
Aaron E. Tenney,
W. Inskeep,
2015,
Front. Microbiol..
S. Yooseph,
K. Nelson,
R. Madupu,
2018,
Microbial Ecology.
J. Venter,
S. Yooseph,
N. Schork,
2019,
Cell metabolism.
E. Ruppin,
S. Yooseph,
K. Brown,
2019,
Nature Communications.
S. Yooseph,
B. Díez,
D. Rusch,
2016,
PloS one.
S. Yooseph,
E. Casamayor,
Johannes Goll,
2015,
The ISME Journal.
T. Stockwell,
S. Yooseph,
Kelvin Li,
2010,
BMC Research Notes.
E. A. Myers,
Rhett M. Rautsaw,
Andrew J. Mason,
2022,
Genome biology and evolution.
Shibu Yooseph,
Yael Mandel-Gutfreund,
Michael Shmoish,
2007,
The ISME Journal.
Susan S. Taylor,
A. F. Neuwald,
J. Venter,
2007,
Genome Biology.
Maria Luisa Bonet,
S. Yooseph,
M. Steel,
1998
.
S. Yooseph,
K. Nelson,
L. Anderson,
2016,
The Journal of infectious diseases.
S. Yooseph,
S. Rajagopala,
S. Pakala,
2022,
Scientific Reports.
Stuart M. Brown,
Eoin L. Brodie,
Y. Rogers,
2010
.
S. Yooseph,
S. Rajagopala,
S. Pakala,
2020,
Cell reports methods.
Cynthia A. Phillips,
Maria Luisa Bonet,
Tandy J. Warnow,
1996,
Mathematical Hierarchies and Biology.
Russell Schwartz,
Daniel H. Huson,
Shibu Yooseph,
2001
.
S. Yooseph,
S. Parthasarathy,
A. Forsman,
2021,
Applied Sciences.
S. Yooseph,
E. Allen,
D. Fadrosh,
2011,
PloS one.
Shibu Yooseph,
Sahar Tavakoli,
S. Yooseph,
2019,
2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).
Shibu Yooseph,
Sahar Tavakoli,
S. Yooseph,
2019,
Bioinform..
J. Glass,
S. Yooseph,
J. Inman,
2012,
BMC Microbiology.
S. Yooseph,
K. Nelson,
M. Torralba,
2016,
Microbial Ecology.
J. Glass,
S. Yooseph,
K. Waites,
2010,
Journal of Clinical Microbiology.
S. Yooseph,
S. Hassouneh,
Mark Loftus,
2021,
Scientific Reports.
Shibu Yooseph,
Xuesong He,
Anna Edlund,
2013,
Microbiome.
S. Yooseph,
W. Shi,
Xuesong He,
2018,
Microbiome.
Shibu Yooseph,
Pieter C Dorrestein,
Xuesong He,
2015,
The ISME Journal.
S. Yooseph,
S. Panda,
A. Chaix,
2014,
Cell metabolism.
John T. Chang,
J. Venter,
S. Yooseph,
2018,
Clinical and Translational Gastroenterology.
S. Yooseph,
S. Hassouneh,
Mark Loftus,
2021,
Frontiers in Microbiology.
Shibu Yooseph,
S. Yooseph,
Youngik Yang,
2013,
Nucleic acids research.
Daniel H. Huson,
Tandy J. Warnow,
Shibu Yooseph,
1999,
JEAL.
S. Yooseph,
A. Forsman,
A. Cole,
2021,
mSphere.
Shibu Yooseph,
Mengxiang Tang,
Michael S. Waterman,
2001,
J. Comput. Biol..
S. Yooseph,
S. Hassouneh,
Mark Loftus,
2021,
BMC microbiology.
Shibu Yooseph,
Cuncong Zhong,
S. Yooseph,
2014,
Nucleic acids research.
Shibu Yooseph,
S. Yooseph,
S. Williamson,
2012,
Methods in molecular biology.
Shibu Yooseph,
Andrey Tovchigrechko,
Kenneth H. Nealson,
2010,
Nature.
Microbial diversity in individuals and their household contacts following typical antibiotic courses
S. Yooseph,
Niels Klitgord,
K. Nelson,
2016,
Microbiome.
Edward W. Lee,
E. Zoetendal,
Jun Yu,
2017,
Genes.
Shibu Yooseph,
Ogobara K. Doumbo,
Peter D. Crompton,
2015,
BMC Genomics.
S. Yooseph,
P. Higgins,
K. Nelson,
2018,
Journal of medical primatology.
Shibu Yooseph,
Giuseppe Lancia,
Vineet Bafna,
2003,
J. Comput. Biol..
Shibu Yooseph,
Sorin Istrail,
Vineet Bafna,
2003,
DMTCS.
Shibu Yooseph,
Sorin Istrail,
Vineet Bafna,
2002,
Computational Methods for SNPs and Haplotype Inference.
K. Pollard,
S. Yooseph,
J. Ladau,
2019,
The ISME Journal.
K. Pollard,
S. Yooseph,
J. Ladau,
2019,
bioRxiv.
S. Yooseph,
C. Dupont,
A. Martiny,
2016,
The ISME Journal.
S. Yooseph,
Ben Liu,
Sirisha Thippabhotla,
2021,
bioRxiv.
Shibu Yooseph,
Youngik Yang,
Cuncong Zhong,
2015,
Bioinform..
S. Yooseph,
S. Rajagopala,
T. Hartert,
2020,
Scientific Reports.
A. Halpern,
M. Frazier,
J. Venter,
2011,
PloS one.
Johannes Goll,
Shibu Yooseph,
David M. Tanenbaum,
2022
.
Shibu Yooseph,
Andrey Tovchigrechko,
Lisa Zeigler Allen,
2012,
PloS one.
Shibu Yooseph,
Youngik Yang,
Cuncong Zhong,
2016,
PLoS Comput. Biol..
Jason R. Miller,
Granger G. Sutton,
Karen E. Nelson,
2014
.
S. Yooseph,
S. Parthasarathy,
A. Forsman,
2021,
Foods.
Hamidreza Chitsaz,
Shibu Yooseph,
Pavel A Pevzner,
2013,
Proceedings of the National Academy of Sciences.
S. Yooseph,
K. Nelson,
W. Shi,
2010,
Molecular oral microbiology.
J. Venter,
S. Yooseph,
Niels Klitgord,
2016,
Scientific Reports.
Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
Shibu Yooseph,
Victor Seguritan,
William W. Greenwald,
2017,
BMC Genomics.
S. Yooseph,
K. Nelson,
R. Madupu,
2018,
Microbial Ecology.
Pelin Yilmaz,
Folker Meyer,
Shibu Yooseph,
2018,
Nature Biotechnology.
S. Yooseph,
S. Rajagopala,
K. Nelson,
2016,
BMC Genomics.
Sanguthevar Rajasekaran,
Shibu Yooseph,
S. Yooseph,
1998,
J. Comput. Syst. Sci..
S. Yooseph,
K. Nealson,
Shibu Yooseph,
2013
.
Peter D. Crompton,
E. Kirkness,
S. Yooseph,
2015,
BMC Genomics.
Shibu Yooseph,
Curtis Huttenhower,
Barbara A. Methé,
2012,
PloS one.
Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
William W. Greenwald,
J. Venter,
J. Venter,
2017,
BMC Genomics.
M. Frazier,
J. Venter,
Hamilton O. Smith,
2009,
Applied and Environmental Microbiology.
S. Yooseph,
W. Shi,
Xuesong He,
2018,
Microbiome.
Maria Luisa Bonet,
Tandy J. Warnow,
Shibu Yooseph,
1998,
RECOMB '98.
S. Yooseph,
B. Abomoelak,
C. Deb,
2021,
American journal of critical care : an official publication, American Association of Critical-Care Nurses.
S. Yooseph,
B. Bergman,
M. Ekman,
2016,
Environmental microbiology.
J. Glass,
S. Yooseph,
J. Inman,
2012,
BMC Microbiology.
S. Yooseph,
B. Bergman,
M. Ekman,
2017,
Environmental microbiology.
Cynthia A. Phillips,
Maria Luisa Bonet,
Tandy J. Warnow,
1996,
STOC '96.
S. Yooseph,
M. Ekman,
C. Dupont,
2014,
The ISME Journal.
S. Yooseph,
M. Thiagarajan,
D. Fadrosh,
2012,
Oral surgery, oral medicine, oral pathology and oral radiology.
S. Yooseph,
F. Rodríguez-Valera,
E. Allen,
2011,
PloS one.
Shibu Yooseph,
Larry Smarr,
Sitao Wu,
2013,
XSEDE.
Hagit Shatkay,
Shibu Yooseph,
Jason R. Miller,
2004,
J. Comput. Biol..
E. Ruppin,
S. Yooseph,
K. Flaherty,
2020
.
Shibu Yooseph,
Youngik Yang,
Cuncong Zhong,
2019,
BMC Bioinformatics.
Natalia N. Ivanova,
Donovan H. Parks,
Devin F R Doud,
2017
.
Cyrus Rashtchian,
Luis Ceze,
Karin Strauss,
2018,
Nature Biotechnology.
Lisa Zhang,
Shibu Yooseph,
Martin Farach-Colton,
1999,
SODA '99.