J. Keith

发表

SABRES: Sequence Alignment By Rare Event Simulation

Dirk P. Kroese, J. Keith, 2002 .

Sequence alignment by rare event simulation

Dirk P. Kroese, J. Keith, 2002, Proceedings of the Winter Simulation Conference.

Linkage and heritability analysis of migraine symptom groupings: a comparison of three different clustering methods on twin data

K. Mengersen, J. Keith, N. Martin, 2009, Human Genetics.

A Bayesian Regression Model with Variable Selection for Genome‐Wide Association Studies

K. Mengersen, K. Ickstadt, J. Keith, 2012 .

How do different aspects of biodiversity change through time? A case study on an Australian bird community

J. Keith, D. Paganin, J. Yen, 2017 .

Linking species richness and size diversity in birds and fishes

J. Keith, D. Paganin, D. Nimmo, 2018 .

Searching for convergence in phylogenetic Markov chain Monte Carlo.

Timothy J. Harlow, Mark A Ragan, Robert G Beiko, 2006, Systematic biology.

A Generalized Markov Sampler

Darryn Bryant, Jonathan M. Keith, Dirk P. Kroese, 2004 .

Sequence segmentation.

J. Keith, 2008, Methods in molecular biology.

Multiple evolutionary rate classes in animal genome evolution.

Kerrie Mengersen, John S Mattick, K. Mengersen, 2010, Molecular biology and evolution.

Drosophila 3′ UTRs Are More Complex than Protein-Coding Sequences

K. Mengersen, J. Keith, Edward Tasker, 2014, PloS one.

Inferring an Original Sequence from Erroneous Copies: Two Approaches

Peter Adams, Darryn Bryant, Jonathan M. Keith, 2003 .

Investigating genomic structure using changept: A Bayesian segmentation model

J. Keith, Manjula Algama, 2014, Computational and structural biotechnology journal.

The generalized gibbs sampler and the neighborhood sampler

Dirk P. Kroese, J. Keith, G. Sofronov, 2008 .

Genomic taxonomy boost by lexical clustering

Jeffrey W. Smith, J. Keith, S. Boyd, 2014 .

Balancing generality and specificity in ecological gradient analysis with species abundance distributions and individual size distributions

J. Keith, D. Paganin, E. Fleishman, 2017 .

Optimal Designs for Kriging Models with Multiple Responses

J. Keith, S. Mukhopadhyay, S. Dasgupta, 2020 .

Chapter 10 Sequencing Aided by Mutagenesis Facilitates the De Novo Sequencing of Megabase DNA Fragments by Short Read Lengths

J. Keith, D. A. Cochran, K. Mitchelson, 2007 .

Unlocking hidden genomic sequence.

Peter Adams, Darryn Bryant, Gita H. Lala, 2004, Nucleic acids research.

Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach

J. Keith, R. Bryson-Richardson, Edward Tasker, 2017, BMC Genomics.

Sequencing by Aligning Mutated DNA Fragments (SAM)

Gita H. Lala, J. Keith, D. A. Cochran, 2006 .

Probing connectivity between transcriptional and post-transcriptional gene networks

J. Keith, S. Boyd, A. Traven, 2011 .

Computational Characterization of 3′ Splice Variants in the GFAP Isoform Family

J. Keith, S. Boyd, B. Nair, 2012, PloS one.

Discovery of Putative Small Non-Coding RNAs from the Obligate Intracellular Bacterium Wolbachia pipientis

J. Keith, M. Woolfit, E. McGraw, 2015, PloS one.

Calculation of IBD probabilities with dense SNP or sequence data

P. Visscher, A. McRae, K. Mengersen, 2008, Genetic epidemiology.

Reconstructing the dynamics of managed populations to estimate the impact of citizen surveillance

J. Keith, T. Kompas, Daniel Spring, 2023, Ecological Modelling.

Bayesian change-point modeling with segmented ARMA model

Jonathan M Keith, Farhana Sadia, Sarah Boyd, 2018, PloS one.

Bayesian semi-individual based model with approximate Bayesian computation for parameters calibration: Modelling Crown-of-Thorns populations on the Great Barrier Reef

Christopher C. Drovandi, Kenneth R. N. Anthony, Kerrie Mengersen, 2017 .

Bayesian latent trait modeling of migraine symptom data

K. Mengersen, J. Keith, N. Martin, 2009, Human Genetics.

A Comparison of Bayesian Inference Strategies for Parameterisation of Large Amplitude AC Voltammetry Derived from Total Current and Fourier Transformed Versions

Martin Robinson, Alan M. Bond, Gareth Kennedy, 2021 .

Recent advances and future perspectives for automated parameterisation, Bayesian inference and machine learning in voltammetry.

J. Keith, A. Bond, D. Gavaghan, 2021, Chemical communications.

Bioinformatics: Volume I: Data, Sequence Analysis, and Evolution

Jonathan M. Keith, J. Keith, 2008 .

Delineating Slowly and Rapidly Evolving Fractions of the Drosophila Genome

Peter Adams, Jonathan M. Keith, John S. Mattick, 2008, J. Comput. Biol..

Methods for Identifying SNP Interactions: A Review on Variations of Logic Regression, Random Forest and Bayesian Logistic Regression

Kerrie L. Mengersen, Holger Schwender, Jonathan M. Keith, 2011, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Detection and identification of cis-regulatory elements using change-point and classification algorithms

J. Keith, M. Ramialison, J. Flegg, 2022, BMC genomics.

Agent-based models of malaria transmission: a systematic review

Richard J Maude, Jonathan M Keith, Manoj Gambhir, 2018, Malaria Journal.

Agent-based models of malaria transmission: a systematic review

J. Keith, M. Gambhir, R. Maude, 2018, Malaria Journal.

Bayesian model of signal rewiring reveals mechanisms of gene dysregulation in acquired drug resistance in breast cancer

Alfons Lawen, J. Keith, A. Lawen, 2017, PloS one.

Model selection in Bayesian segmentation of multiple DNA alignments

Jonathan M. Keith, Christopher Oldmeadow, J. Keith, 2011, Bioinform..

Optimal designs for some bivariate cokriging models

J. Keith, S. Mukhopadhyay, S. Dasgupta, 2020, Journal of Statistical Planning and Inference.

Segmenting Eukaryotic Genomes with the Generalized Gibbs Sampler

Jonathan M. Keith, J. Keith, 2006, J. Comput. Biol..

Prediction of signaling cross-talks contributing to acquired drug resistance in breast cancer cells by Bayesian statistical modeling

Jonathan M. Keith, Alfons Lawen, A. K. M. Azad, 2015, BMC Systems Biology.

Network Structure Change Point Detection by Posterior Predictive Discrepancy

Tiangang Cui, Jonathan M. Keith, Georgy Sofronov, 2018 .

Bayesian inference in estimation of distribution algorithms

Marcus Gallagher, George Y. Sofronov, Jonathan M. Keith, 2007, 2007 IEEE Congress on Evolutionary Computation.

G-optimal grid designs for kriging models

J. Keith, S. Mukhopadhyay, S. Dasgupta, 2021, 2111.06632.

Estimating change-points in biological sequences via the cross-entropy method

Gareth E. Evans, George Y. Sofronov, Jonathan M. Keith, 2011, Ann. Oper. Res..

Parallel cross-entropy optimization

Gareth E. Evans, Jonathan M. Keith, Dirk P. Kroese, 2007, 2007 Winter Simulation Conference.

ESTIMATING VOLUME DISTRIBUTIONS USING MAXIMUM ENTROPY

J. Keith, 2011 .

Geometric probability based stereological corrections

J. Keith, 2004 .

Function regression in ecology and evolution: FREE

Ralph Mac Nally, Jian D. L. Yen, James R. Thomson, 2015 .

Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs

J. Keith, J. M. Keith, D. Spring, 2013, Proceedings of the National Academy of Sciences.

Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges.

Thomas House, James Walker, Robert Moss, 2020, Epidemics.

Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach

J. Keith, R. Bryson-Richardson, Edward Tasker, 2017, BMC Genomics.

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

Christian M. Davey, J. Keith, S. Boyd, 2012, BMC Bioinformatics.

Sequence Segmentation with changeptGUI.

Edward Tasker, Jonathan M Keith, J. Keith, 2017, Methods in molecular biology.

Adaptive independence samplers

George Y. Sofronov, Jonathan M. Keith, Dirk P. Kroese, 2008, Stat. Comput..

A comparison of approximate versus exact techniques for Bayesian parameter inference in nonlinear ordinary differential equation models

Christopher C. Drovandi, Jennifer A. Flegg, Amani A. Alahmadi, 2020, Royal Society Open Science.

Cross-Talk Categorisations in Data-Driven Models of Signalling Networks: A System-Level View

Jonathan M. Keith, Alfons Lawen, A. K. M. Azad, 2018 .

A simulated annealing algorithm for finding consensus sequences

Peter Adams, Jonathan M. Keith, Dirk P. Kroese, 2002, Bioinform..

Multiple evolutionary rate classes in animal genome evolution.

K. Mengersen, J. Keith, J. Mattick, 2010, Molecular biology and evolution.

Accurate phenotyping: Reconciling approaches through Bayesian model averaging

Carla Chia-Ming Chen, Jonathan Macgregor Keith, Kerrie Lee Mengersen, 2017, PloS one.

Bioinformatics: Volume II: Structure, Function and Applications

Jonathan M. Keith, J. Keith, 2017 .

Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs

J. Keith, Daniel Spring, 2013, Proceedings of the National Academy of Sciences.

Identifying Change-Points in Biological Sequences via Sequential Importance Sampling

Gareth E. Evans, George Y. Sofronov, Dirk P. Kroese, 2009 .

Binary sequences with a Ces\`aro limit

J. Keith, Greg Markowsky, 2021, 2107.01020.

Properties of Functions on a Bounded Charge Space

Jonathan M. Keith, J. Keith, 2021, Analysis and Geometry in Metric Spaces.

A theory of integration for Ces\`aro limits

J. Keith, Greg Markowsky, 2021, 2104.08705.

Binary sequences with a Cesàro limit

J. Keith, Greg Markowsky, 2021 .