J. Blume

发表

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

Tyson A. Clark, D. Licatalosi, A. Mele, 2008, Nature.

Integrated detection and population-genetic analysis of SNPs and copy number variation

Joshua M. Korn, Teresa A. Webster, Marcia M. Nizzari, 2008, Nature Genetics.

Genetic architecture of transcript-level variation in humans.

Tyson A. Clark, A. Schweitzer, J. Blume, 2008, American journal of human genetics.

Evaluation of genetic variation contributing to differences in gene expression between populations.

Tyson A. Clark, A. Schweitzer, J. Blume, 2008, American journal of human genetics.

A correlation with exon expression approach to identify cis-regulatory elements for tissue-specific alternative splicing

Tyson A. Clark, A. Schweitzer, J. Blume, 2007, Nucleic acids research.

Nova regulates brain-specific splicing to shape the synapse

Tyson A. Clark, J. Ule, J. Blume, 2005, Nature Genetics.

A large-scale and robust dynamic MRM study of colorectal cancer biomarkers.

Ryan W. Benz, J. Blume, L. Croner, 2018, Journal of proteomics.

Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation

Alexander R. Pico, Tyson A. Clark, J. Blume, 2010, Proceedings of the National Academy of Sciences.

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay.

Tyson A. Clark, M. Ares, J. Blume, 2007, Genes & development.

Heritability of alternative splicing in the human genome.

Harry Zuzan, Jacek Majewski, Tyson A. Clark, 2007, Genome research.

The Dictyostelium discoideum spore germination-specific cellulase is organized into functional domains

J. Blume, R. Ramalingam, H. Ennis, 1992, Journal of bacteriology.

Discovery and validation of a colorectal cancer classifier in a new blood test with improved performance for high-risk subjects

Ryan W. Benz, H. Nielsen, J. Blume, 2017, Clinical Proteomics.

Computational Analysis of an Evolutionarily Conserved Vertebrate Muscle Alternative Splicing Program

Tyson A. Clark, A. Schweitzer, J. Blume, 2006 .

Overexpression of Repressive cAMP Response Element Modulators in High Glucose and Fatty Acid-treated Rat Islets

A. Schweitzer, J. Blume, Yun-ping Zhou, 2003, Journal of Biological Chemistry.

Rapid, deep and precise profiling of the plasma proteome with multi-nanoparticle protein corona

Ryan W. Benz, S. Carr, J. Blume, 2020, Nature Communications.

AT-rich upstream sequence elements regulate spore germination-specific expression of the Dictyostelium discoideum celA gene.

J. Blume, K. Ganguly, R. Ramalingam, 1995, Nucleic acids research.

Ribosome loading, but not protein synthesis, is required for estrogen stabilization of Xenopus laevis vitellogenin mRNA.

J. Blume, D. Shapiro, 1989, Nucleic acids research.

nonsense-mediated decay of splicing regulators by alternative splicing and Ultraconserved elements are associated with homeostatic control data

Tyson A. Clark, M. Ares, J. Blume, 2007 .

Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays

David Haussler, Alan Williams, Tyson A. Clark, 2005, PLoS Comput. Biol..

Estrogen regulation of gene transcription and mRNA stability.

J. Blume, M. Barton, D. Lew, 1989, Recent progress in hormone research.

Discovery of tissue-specific exons using comprehensive human exon microarrays

Tyson A. Clark, Tyson A Clark, John E Blume, 2007, Genome Biology.

A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity

M. Eileen Dolan, Wei Zhang, Nancy J. Cox, 2007, Proceedings of the National Academy of Sciences.

ANOSVA: a statistical method for detecting splice variation from expression data

Simon Cawley, Gang Lu, Melissa S. Cline, 2005, ISMB.

Identification of common genetic variants that account for transcript isoform variation between human populations

Lijun He, M. Eileen Dolan, Wei Zhang, 2008, Human Genetics.

Dictyostelium discoideum gene family contains a long internal amino acid repeat.

J. Blume, D. Shaw, R. Giorda, 1991, Developmental genetics.

Identification of genetic variants contributing to cisplatin-induced cytotoxicity by use of a genomewide approach.

Shiwei Duan, Tyson A. Clark, Sunita J Shukla, 2007, American journal of human genetics.

Estrogen Control of Vitellogenin Gene Transcription and mRNA Stability

J. Blume, D. Mckearin, D. Nielsen, 1987 .

Peptide-centric analyses of human plasma enable increased resolution of biological insights into non-small cell lung cancer relative to protein-centric analysis

Ryan W. Benz, S. Batzoglou, J. Blume, 2022 .

Discovery and validation of a colorectal cancer classifier in a new blood test with improved performance for high-risk subjects

Ryan W. Benz, H. Nielsen, J. Blume, 2017, Clinical Proteomics.

A Plasma-Based Protein Marker Panel for Colorectal Cancer Detection Identified by Multiplex Targeted Mass Spectrometry

Ryan W. Benz, Jeffrey J. Jones, J. Blume, 2016, Clinical colorectal cancer.

Engineered nanoparticles enable deep proteomics studies at scale by leveraging tunable nano–bio interactions

Tristan R. Brown, Ryan W. Benz, S. Batzoglou, 2022, Proceedings of the National Academy of Sciences of the United States of America.

Functionally distinct BMP1 isoforms show an opposite pattern of abundance in plasma from non-small cell lung cancer subjects and controls

Ryan W. Benz, S. Batzoglou, J. Blume, 2023, bioRxiv.

Discovery and Validation of Plasma-Protein Biomarker Panels for the Detection of Colorectal Cancer and Advanced Adenoma in a Danish Collection of Samples from Patients Referred for Diagnostic Colonoscopy.

Ryan W. Benz, Jeffrey J. Jones, H. Nielsen, 2016, The journal of applied laboratory medicine.

Matrix metalloproteinases contribute to insulin insufficiency in Zucker diabetic fatty rats.

A. Schweitzer, J. Blume, C. Burant, 2005, Diabetes.

Evaluation of Genetic Variation Contributing to Differences in Gene Expression between Populations (DOI:10.1016/j.ajhg.2007.12.015)

Tyson A. Clark, A. Schweitzer, J. Blume, 2008 .

A Dictyostelium discoideum cellulase is a member of a spore germination-specific gene family.

J. Blume, H. Ennis, 1991, The Journal of biological chemistry.