Q. Pan

发表

Functional coordination of alternative splicing in the mammalian central nervous system

B. Frey, Leo J. Lee, T. Hughes, 2007, Genome Biology.

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

B. Frey, Leo J. Lee, B. Blencowe, 2008, Nature Genetics.

Genome-wide analysis of mouse transcripts using exon microarrays and factor graphs

B. Frey, T. Hughes, Q. Morris, 2005, Nature Genetics.

Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform.

B. Frey, T. Hughes, Q. Morris, 2004, Molecular cell.

Deciphering the splicing code

Brendan J. Frey, Weijun Gao, Ofer Shai, 2010, Nature.

Regulation of Vertebrate Nervous System Alternative Splicing and Development by an SR-Related Protein

John A. Calarco, B. Blencowe, Q. Pan, 2009, Cell.

Alternative splicing of conserved exons is frequently species-specific in human and mouse.

B. Frey, T. Hughes, Q. Morris, 2005, Trends in genetics : TIG.

The functional landscape of mouse gene expression

B. Frey, T. Hughes, Q. Morris, 2004, Journal of biology.

Regulation of Alternative Splicing by Histone Modifications

B. Blencowe, Q. Pan, R. F. Luco, 2010, Science.

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression.

B. Frey, B. Blencowe, C. Misquitta, 2006, Genes & development.

Tissue-specific alternative splicing remodels protein-protein interaction networks.

Xinchen Wang, Philip M. Kim, Philip M Kim, 2012, Molecular cell.

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Michael D. Wilson, Philip M. Kim, B. Frey, 2012, Science.

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation.

B. Blencowe, Q. Pan, S. Freier, 2010, Molecular cell.

A germline mutation in SRRM2, a splicing factor gene, is implicated in papillary thyroid carcinoma predisposition

B. Blencowe, Q. Pan, Huiling He, 2015, Scientific Reports.

Cross-regulation between an alternative splicing activator and a transcription repressor controls neurogenesis.

Qun Pan, B. Blencowe, Q. Pan, 2011, Molecular cell.

Regulation of alternative splicing by the core spliceosomal machinery.

Qun Pan, B. Blencowe, Q. Pan, 2011, Genes & development.

The expression profile of micro-RNA in endometrium and endometriosis and the influence of ovarian steroids on their expression.

Q. Pan, N. Chegini, Xiaoping Luo, 2007, Molecular human reproduction.

Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation.

Arun K. Ramani, A. Fraser, B. Blencowe, 2011, Genome research.

alternative splicing regulation Global impact of RNA polymerase II elongation inhibition on Material Supplemental

Arun K. Ramani, A. Fraser, B. Blencowe, 2011 .

Global analysis of alternative splicing during T-cell activation.

Qun Pan, Alan Tong, B. Blencowe, 2007, RNA.

Global analysis of alternative splicing differences between humans and chimpanzees.

Yi Xing, Christopher J. Lee, Xinshu Xiao, 2007, Genes & development.

Genomic and proteomic profiling I: Leiomyomas in African Americans and Caucasians

Q. Pan, N. Chegini, Xiaoping Luo, 2007, Reproductive biology and endocrinology : RB&E.

Stromal Fat4 acts non-autonomously with Dchs1/2 to restrict the nephron progenitor pool

B. Blencowe, Q. Pan, H. McNeill, 2015, Development.

Regulation of Multiple Core Spliceosomal Proteins by Alternative Splicing-Coupled Nonsense-Mediated mRNA Decay

B. Blencowe, Matthew M Fagnani, Q. Pan, 2008, Molecular and Cellular Biology.

Genome-wide analysis of alternative splicing in Caenorhabditis elegans.

Arun K. Ramani, John A. Calarco, Andrew C. Nelson, 2011, Genome research.

Retracted: differential expression of microRNAs in myometrium and leiomyomas and regulation by ovarian steroids

Q. Pan, N. Chegini, Xiaoping Luo, 2015, Journal of cellular and molecular medicine.

The RNA-binding profile of Acinus, a peripheral component of the exon junction complex, reveals its role in splicing regulation

B. Blencowe, Q. Pan, E. Eyras, 2016, RNA.

Latent Regulatory Potential of Human-Specific Repetitive Elements

Paul Flicek, Rory Stark, Michael D. Wilson, 2013, Molecular cell.

Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors.

Robert J. Weatheritt, T. Hughes, B. Blencowe, 2017, Molecular cell.

Addendum: Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

B. Frey, Leo J. Lee, B. Blencowe, 2009, Nature Genetics.

Corrigendum: Genome-wide association of early-onset myocardial infarction with single nucleotide polymorphisms and copy number variants

Judy H. Cho, K. Roeder, M. Daly, 2009, Nature Genetics.

Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay

B. Blencowe, Q. Pan, T. Mak, 2010, Proceedings of the National Academy of Sciences.

Reproductive Biology and Endocrinology Open Access Genomic and Proteomic Profiling Ii: Comparative Assessment of Gene Expression Profiles in Leiomyomas, Keloids, and Surgically-induced Scars

Q. Pan, N. Chegini, Xiaoping Luo, 2007 .

Inferring Alternative Splicing Combinations from Comprehensive Putative-Junction Microarray Data

B. Frey, Leo J. Lee, C. Misquitta, 2008 .

Doxycycline alters the expression of inflammatory and immune-related cytokines and chemokines in human endometrial cells: implication in irregular uterine bleeding.

Q. Pan, I. Zineh, R. Williams, 2006, Human reproduction.

Two Clusters of Acidic Amino Acids Near the NH2 Terminus of Complement Component C4 α′-Chain Are Important for C2 Binding1

Q. Pan, D. Isenman, R. Ebanks, 2000, The Journal of Immunology.

Two Clusters of Acidic Amino Acids Near the NH 2 Terminus of Complement Component C4 a*-Chain Are Important for

Q. Pan, D. Isenman, R. Ebanks, 2000 .

Effects of acute ethanol exposure on regulatory mechanisms of Bcl-2-associated apoptosis promoter, bad, in neonatal rat cerebellum: differential effects during vulnerable and resistant developmental periods.

Q. Pan, G. Shaw, Irina Madorsky, 2006, Alcoholism, clinical and experimental research.

Overexpression of microRNA gga-miR-21 in chicken fibroblasts suppresses replication of infectious bursal disease virus through inhibiting VP1 translation.

Q. Pan, Xiaomei Wang, Yong-qiang Wang, 2013, Antiviral research.

gga-miR-142-5p attenuates IRF7 signaling and promotes replication of IBDV by directly targeting the chMDA5's 3' untranslated region.

Q. Pan, W. Ouyang, Jing Qian, 2018, Veterinary microbiology.

An activator of G protein-coupled receptor and MEK1/2-ERK1/2 signaling inhibits HIV-1 replication by altering viral RNA processing

B. Blencowe, Q. Pan, P. Stoilov, 2020, PLoS pathogens.

Widespread intron retention in mammals functionally tunes transcriptomes

B. Frey, B. Alipanahi, B. Blencowe, 2014, Genome research.

machineryof alternative splicing by the core spliceosomal

B. Blencowe, Q. Pan, Arneet L Saltzman, 2011 .

MicroRNA signature and regulatory functions in the endometrium during normal and disease states.

Q. Pan, N. Chegini, 2008, Seminars in reproductive medicine.

nonsense-mediated mRNA decay to control gene expression widespread coupling of alternative splicing with Quantitative microarray profiling provides evidence against Material Supplemental

B. Frey, B. Blencowe, C. Misquitta, 2006 .

transcriptomes Widespread intron retention in mammals functionally tunes Material

B. Frey, B. Alipanahi, B. Blencowe, 2014 .

Gomafu lncRNA knockout mice exhibit mild hyperactivity with enhanced responsiveness to the psychostimulant methamphetamine

B. Blencowe, Joanna Y. Ip, Q. Pan, 2016, Scientific Reports.

The transcriptional and splicing landscape of intestinal organoids undergoing nutrient starvation or endoplasmic reticulum stress

B. Blencowe, Q. Pan, D. Philpott, 2016, BMC Genomics.

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Michael D. Wilson, Philip M. Kim, B. Frey, 2013 .

Epstein-Barr Virus EBNA1 Protein Regulates Viral Latency through Effects on let-7 MicroRNA and Dicer

B. Blencowe, Q. Pan, L. Frappier, 2014, Journal of Virology.

Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming

B. Blencowe, Q. Pan, Wei Li, 2015, Genes & development.

Alternative splicing networks regulated by signaling in human T cells.

Christopher A. Yarosh, B. Blencowe, Q. Pan, 2012, RNA.

Alternative splicing networks regulated by signaling in human T Material

Christopher A. Yarosh, B. Blencowe, Q. Pan, 2012 .

An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming

Jeffrey L. Wrana, Timothy R. Hughes, Esteban O. Mazzoni, 2011, Cell.

Differential expression of microRNAs in myometrium and leiomyomas and regulation by ovarian steroids

Q. Pan, N. Chegini, Xiaoping Luo, 2007, Journal of cellular and molecular medicine.

Functional mechanisms of apoptosis‐related proteins in neonatal rat cerebellum are differentially influenced by ethanol at postnatal days 4 and 7

Q. Pan, G. Shaw, Irina Madorsky, 2005, Journal of neuroscience research.

microRNA 21: response to hormonal therapies and regulatory function in leiomyoma, transformed leiomyoma and leiomyosarcoma cells

Q. Pan, N. Chegini, Xiaoping Luo, 2009, Molecular human reproduction.

Probabilistic Inference of Alternative Splicing Events in Microarray Data

Brendan J. Frey, Quaid Morris, Ofer Shai, 2004, NIPS.

Mitochondrially targeted vitamin E and vitamin E mitigate ethanol-mediated effects on cerebellar granule cell antioxidant defense systems

Q. Pan, Irina Madorsky, M. Paiva, 2005, Brain Research.

Endometrial expression of epithelial neutrophil-activating peptide-78 during the menstrual cycle or in progestin-only contraceptive users with breakthrough bleeding and the influence of doxycycline therapy.

Q. Pan, D. Archer, N. Chegini, 2007, Human reproduction.

transcriptome C . elegans of the descriptionCircLigase-based capture yields a refined and extended Multimodal RNA-seq using single-strand , double-strand , and Material Supplemental

Arun K. Ramani, Ayelet T. Lamm, John A. Calarco, 2011 .

Global analysis of alternative splicing differences between humans and chimpanzees

Christopher J. Lee, John A. Calarco, B. Blencowe, 2007 .

The Evolutionary Landscape of Alternative Splicing in Vertebrate Species

Philip M. Kim, B. Frey, Leo J. Lee, 2012, Science.

Cross-regulation between an alternative splicing activator and a transcription repressor controls neurogenesis.

B. Blencowe, Q. Pan, D. Ray, 2011, Molecular cell.

The expression profile of micro-RNA in endometrium and endometriosis and the influence of ovarian steroids on their expression.

Q. Pan, N. Chegini, Xiaoping Luo, 2007, Molecular human reproduction.

Doxycycline alters the expression of inflammatory and immune-related cytokines and chemokines in human endometrial cells: implication in irregular uterine bleeding.

Q. Pan, I. Zineh, Rongxiu Li, 2006, Human reproduction.

Alternative splicing networks regulated by signaling in human T cells.

Christopher A. Yarosh, B. Blencowe, Q. Pan, 2012, RNA.

Alternative splicing of conserved exons is frequently species-specific in human and mouse.

B. Frey, T. Hughes, B. Blencowe, 2005, Trends in genetics : TIG.

Regulation of Multiple Core Spliceosomal Proteins by Alternative Splicing-Coupled Nonsense-Mediated mRNA Decay

B. Blencowe, Matthew M Fagnani, Q. Pan, 2008, Molecular and Cellular Biology.

Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors.

Robert J. Weatheritt, Frederick S. Vizeacoumar, T. Hughes, 2017, Molecular cell.

Differential expression of microRNAs in myometrium and leiomyomas and regulation by ovarian steroids

Q. Pan, N. Chegini, Xiaoping Luo, 2007, Journal of cellular and molecular medicine.

gga-miR-2127 downregulates the translation of chicken p53 and attenuates chp53-mediated innate immune response against IBDV infection.

Q. Pan, Hai-bin Zhang, Zhenwei Bi, 2017, Veterinary microbiology.