J. Vallino

发表

Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction

G. Stephanopoulos, J. Vallino, 2000, Biotechnology and bioengineering.

Effect of historical changes in land use and climate on the water budget of an urbanizing watershed

J. Vallino, L. Claessens, C. Hopkinson, 2006 .

A Review of Recent Developments in

J. Vallino, W. Boynton, R. Uncles, 1997 .

Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production

J. Vallino, 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.

Improving marine ecosystem models: Use of data assimilation and mesocosm experiments

J. Vallino, 2000 .

Using maximum entropy production to describe microbial biogeochemistry over time and space in a meromictic pond

J. Vallino, J. Huber, 2018, bioRxiv.

How the Second Law of Thermodynamics Has Informed Ecosystem Ecology through Its History

J. Vallino, D. Childers, E. Chapman, 2014 .

Differences and implications in biogeochemistry from maximizing entropy production locally versus globally

J. Vallino, 2011 .

Efficient export of carbon to the deep ocean through dissolved organic matter

J. Vallino, C. Hopkinson, 2005, Nature.

Characteristics of Marine Aggregates in Shallow-water Ecosystems: Implications for Disease Ecology

J. Vallino, R. Smolowitz, B. Allam, 2007, EcoHealth.

Using maximum entropy production to describe microbial biogeochemistry over time and space in a meromictic pond

J. Vallino, J. Huber, 2018, bioRxiv.

Differences and implications in biogeochemistry from maximizing entropy production locally versus globally

J. Vallino, 2011 .

Microbial Communities are Well Adapted to Disturbances in Energy Input

J. Vallino, J. Huber, N. Fernandez-Gonzalez, 2016, bioRxiv.

Microbial Communities Are Well Adapted to Disturbances in Energy Input

J. Vallino, J. Huber, N. Fernandez-Gonzalez, 2016, mSystems.

Estimating estuarine gross production, community respiration and net ecosystem production: a nonlinear inverse technique

J. Vallino, C. Hopkinson, R. Garritt, 2005 .

MODELING NITROGEN TRANSPORT IN THE IPSWICH RIVER BASIN, MASSACHUSETTS, USING A HYDROLOGICAL SIMULATION PROGRAM IN FORTRAN (HSPF) 1

J. Vallino, S. Filoso, L. Claessens, 2004 .

Aerobic and anaerobic microbial degradation of weathered and fresh oil from the BP Deepwater Horizon Oil Spill

J. Vallino, K. Gosselin, 2013 .

Seafloor Incubation Experiment with Deep-Sea Hydrothermal Vent Fluid Reveals Effect of Pressure and Lag Time on Autotrophic Microbial Communities

J. Vallino, B. Larson, J. Huber, 2020, Applied and Environmental Microbiology.

Terrestrial inputs of organic matter to coastal ecosystems: An intercomparison of chemical characteristics and bioavailability

J. Vallino, C. Hopkinson, M. Moran, 1998 .

Effects of carbon source and particle size on nitrogen cycling in aggregated "Bio-Floc" microbial communities

J. Vallino, Chelsea Westra, 2013 .

Toward the development of generally applicable models of the microbial loop in aquatic ecosystems

J. Vallino, C. Hopkinson, 1994, Microbial Ecology.

Modeling bacterial utilization of dissolved organic matter: Optimization replaces Monod growth kinetics

J. Vallino, C. Hopkinson, J. Hobbie, 1996 .

Nucleic acids from the host bacterium as a major source of nucleotides for three marine bacteriophages

David C. Smith, J. Vallino, F. Azam, 1993 .

Relationships of Land Use and Stream Solute Concentrations in the Ipswich River Basin, Northeastern Massachusetts

Edward B. Rastetter, Joseph J. Vallino, J. Vallino, 2005 .

Gas Exchange Rates in the Parker River Estuary, Massachusetts.

J. Vallino, C. Hopkinson, A. Giblin, 1996, The Biological bulletin.

Relationships between soil organic matter, nutrients, bacterial community structure, and the performance of microbial fuel cells.

Marcus O. Gay, Marcus Gay, J. Vallino, 2012, Environmental science & technology.

Estimation of Dispersion and Characteristic Mixing Times in Plum Island Sound Estuary

Joseph J. Vallino, J. Vallino, C. Hopkinson, 1998 .

Decomposition of dissolved organic matter from the continental margin

J. Vallino, C. Hopkinson, A. Nolin, 2002 .

Effects of land use on the degradability of dissolved organic matter in three watersheds of the Plum Island Sound estuary.

J. Vallino, J. Hobbie, A. G. Uhlenhopp, 1995, The Biological bulletin.

Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction

G. Stephanopoulos, J. Vallino, 2000, Biotechnology and bioengineering.

The Thermodynamics of Marine Biogeochemical Cycles: Lotka Revisited.

J. Vallino, C. Algar, 2016, Annual review of marine science.

Use of Receding Horizon Optimal Control to Solve MaxEP-Based Biogeochemistry Problems

J. Vallino, J. Huber, C. Algar, 2014 .

Use of Receding Horizon Optimal Control 3 to Solve MaxEP-based Biogeochemistry

J. Vallino, J. Huber, C. Algar, 2013 .

Diel light cycles affect phytoplankton competition in the global ocean

Christopher L. Follett, J. Vallino, M. Follows, 2021, bioRxiv.

Phytoplankton Temporal Strategies Increase Entropy Production in a Marine Food Web Model

Joseph J. Vallino, Ioannis Tsakalakis, J. Vallino, 2020, Entropy.

� 2003, by the American Society of Limnology and Oceanography, Inc. Processing watershed-derived nitrogen in a well-flushed New England estuary

J. Vallino, L. Deegan, B. Peterson, 2022 .

The relationships among man’s activities in watersheds and estuaries: A model of runoff effects on patterns of estuarine community metabolism

J. Vallino, C. Hopkinson, 1995 .

Wetland‐estuarine‐shelf interactions in the Plum Island Sound and Merrimack River in the Massachusetts coast

Changsheng Chen, Robert C. Beardsley, Joseph J. Vallino, 2010 .

Carbon Flux Distributions at the Pyruvate Branch Point in Corynebacterium glutamicum during Lysine Overproduction

Gregory Stephanopoulos, Joseph J. Vallino, G. Stephanopoulos, 1994 .

SUSCEPTIBILITY OF SALT MARSHES TO NUTRIENT ENRICHMENT AND PREDATOR REMOVAL

Carl T. Friedrichs, Lynsey E. LeMay, Linda A. Deegan, 2007 .

Modeling Microbial Consortiums as Distributed Metabolic Networks

Joseph J. Vallino, J. Vallino, 2003, The Biological Bulletin.

An inverse ecosystem model of year-to-year variations with first order approximation to the annual mean fluxes

J. Vallino, Z. Wan, 2005 .

Predicting microbial nitrate reduction pathways in coastal sediments

J. Vallino, C. Algar, 2014 .

N budgets and aquatic uptake in the Ipswich River basin, northeastern Massachusetts

J. Vallino, C. Hopkinson, E. Rastetter, 2002 .

Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates

Fengzhu Sun, Li Charlie Xia, Jacob Cram, 2011, BMC Systems Biology.

Study of the inter-annual food web dynamics in the Kuparuk River with a first-order approximation inverse model

J. Vallino, B. Peterson, Z. Wan, 2008 .

Fluid geochemistry, local hydrology, and metabolic activity define methanogen community size and composition in deep-sea hydrothermal vents

J. Vallino, B. Larson, J. Huber, 2019, The ISME Journal.

Ipswich River Nutrient Dynamics: Preliminary Assessment of a Simple Nitrogen-Processing Model.

J. Vallino, L. Claessens, C. Hopkinson, 1999, The Biological bulletin.

Network rigidity and metabolic engineering in metabolite overproduction

G. Stephanopoulos, J. Vallino, JJ Vallino, 1991, Science.

A review of recent developments in estuarine scalar flux estimation

David A. Jay, Walter R. Boynton, Joseph J. Vallino, 1997 .

Identification of branch-point restrictions in microbial metabolism through metabolic flux analysis and local network perturbations

J. Vallino, Joseph John Vallino, 1991 .

Carbon Flux Distributions at the Glucose 6‐Phosphate Branch Point in Corynebacterium glutamicum during Lysine Overproduction

Gregory Stephanopoulos, Joseph J. Vallino, G. Stephanopoulos, 1994 .

Using maximum entropy production to describe microbial biogeochemistry over time and space in a meromictic pond

J. Vallino, J. Huber, 2018, bioRxiv.

Estimating estuarine gross production, community respiration and net ecosystem production: a nonlinear inverse technique

J. Vallino, C. Hopkinson, R. Garritt, 2005 .

Long-Term Effect of Municipal Water Use on the Water Budget of the Ipswich River Basin.

J. Vallino, L. Claessens, C. Hopkinson, 1999, The Biological bulletin.