Y. Xing

发表

Multiphasic and Dynamic Changes in Alternative Splicing during Induction of Pluripotency Are Coordinated by Numerous RNA-Binding Proteins.

B. Cieply, Juw Won Park, Angela Nakauka-Ddamba, 2016, Cell reports.

Detection of splice junctions from paired-end RNA-seq data by SpliceMap

Y. Xing, W. Wong, K. Au, 2010, Nucleic acids research.

Probe Selection and Expression Index Computation of Affymetrix Exon Arrays

Y. Xing, W. Wong, K. Kapur, 2006, PloS one.

Assessing the conservation of mammalian gene expression using high-density exon arrays.

Y. Xing, M. Scott, W. Wong, 2007, Molecular biology and evolution.

Exon arrays provide accurate assessments of gene expression

Yi Xing, Wing Hung Wong, Karen Kapur, 2007, Genome Biology.

The epithelial splicing factors ESRP1 and ESRP2 positively and negatively regulate diverse types of alternative splicing events

Claude C. Warzecha, Y. Xing, R. Carstens, 2009, RNA biology.

SURVIV for survival analysis of mRNA isoform variation

Y. Xing, Chengyang Wang, Shihao Shen, 2016, Nature Communications.

A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function

Y. Xing, W. Thompson, B. Barres, 2008, The Journal of Neuroscience.

Structure and activity of putative intronic miRNA promoters.

Ji Wan, Yi Xing, Ryan M Spengler, 2010, RNA.

Human transcriptome array for high-throughput clinical studies

John D. Storey, Tyson A. Clark, A. Schweitzer, 2011, Proceedings of the National Academy of Sciences.

MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data

Juw Won Park, Y. Xing, R. Carstens, 2012, Nucleic acids research.

Alternative splicing and RNA selection pressure — evolutionary consequences for eukaryotic genomes

Christopher J. Lee, Y. Xing, Yi Xing, 2006, Nature Reviews Genetics.

Evolution of alternative splicing in primate brain transcriptomes.

Y. Xing, Lan Lin, B. Davidson, 2010, Human molecular genetics.

The Expanding Landscape of Alternative Splicing Variation in Human Populations

Y. Xing, Lan Lin, Eddie Park, 2018, American journal of human genetics.

The effect of intron length on exon creation ratios during the evolution of mammalian genomes.

Christopher J. Lee, Y. Xing, Meenakshi Roy, 2008, RNA.

An expectation-maximization algorithm for probabilistic reconstructions of full-length isoforms from splice graphs

Yi Xing, Christopher J. Lee, Christopher Lee, 2006, Nucleic acids research.

Rbfox Proteins Regulate Splicing as Part of a Large Multiprotein Complex LASR

Yi Xing, Kelsey C. Martin, Douglas L. Black, 2016, Cell.

Discover hidden splicing variations by mapping personal transcriptomes to personal genomes

Juw Won Park, Y. Xing, Zhi-xiang Lu, 2015, Nucleic acids research.

Context-dependent robustness to 5' splice site polymorphisms in human populations.

James J. Cai, Y. Xing, P. Jiang, 2011, Human molecular genetics.

Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs.

Yi Xing, Nicholas Van Wittenberghe, Y. Xing, 2017, Cell reports.

Transcriptome-wide Landscape of Pre-mRNA Alternative Splicing Associated with Metastatic Colonization

Yi Xing, Shihao Shen, Michael D. Henry, 2014, Molecular Cancer Research.

Genome-Wide Determination of a Broad ESRP-Regulated Posttranscriptional Network by High-Throughput Sequencing

Ji Wan, Yi Xing, Shihao Shen, 2012, Molecular and Cellular Biology.

An ESRP‐regulated splicing programme is abrogated during the epithelial–mesenchymal transition

Yi Xing, Shihao Shen, Claude C. Warzecha, 2010, The EMBO journal.

Global analysis of alternative splicing differences between humans and chimpanzees.

Yi Xing, Christopher J. Lee, Xinshu Xiao, 2007, Genes & development.

Transcriptome-wide Discovery of microRNA Binding Sites in Human Brain

Yi Xing, Christopher A. Ross, Brian L. Gilmore, 2014, Neuron.

m6A-LAIC-seq reveals the census and complexity of the m6A epitranscriptome

Yi Xing, Peter Dedon, Nicholas Van Wittenberghe, 2016, Nature Methods.

m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells.

Yi Xing, Howard Y. Chang, Marius Wernig, 2014, Cell stem cell.

The Bifunctional microRNA miR-9/miR-9* Regulates REST and CoREST and Is Downregulated in Huntington's Disease

Yi Xing, Lesley Jones, Y. Xing, 2008, The Journal of Neuroscience.

Widespread establishment and regulatory impact of Alu exons in human genes

James J. Cai, Y. Xing, Lan Lin, 2011, Proceedings of the National Academy of Sciences.

Relating alternative splicing to proteome complexity and genome evolution.

Christopher J. Lee, Y. Xing, Yi Xing, 2007, Advances in experimental medicine and biology.

Underlying the Metabolic Syndrome in the Lyon Hypertensive Rat Systems Biology With High-Throughput Sequencing Reveals Genetic Mechanisms

John Man-shun Ma, Y. Xing, Lan Lin, 2015 .

Reconstruction of full-length isoforms from splice graphs.

Christopher J. Lee, Y. Xing, Yi Xing, 2008, Methods in molecular biology.

Human-specific microRNA regulation of FOXO1: implications for microRNA recognition element evolution.

Ryan M Spengler, Y. Xing, B. Davidson, 2014, Human molecular genetics.

Protein Modularity of Alternatively Spliced Exons Is Associated with Tissue-Specific Regulation of Alternative Splicing

Christopher J. Lee, Y. Xing, Yi Xing, 2005, PLoS genetics.

Concerted effects of heterogeneous nuclear ribonucleoprotein C1/C2 to control vitamin D-directed gene transcription and RNA splicing in human bone cells

Juw Won Park, Y. Xing, J. Adams, 2016, Nucleic acids research.

SEASTAR: systematic evaluation of alternative transcription start sites in RNA

Xuegong Zhang, Y. Xing, P. Stoilov, 2018, Nucleic acids research.

GLiMMPS: robust statistical model for regulatory variation of alternative splicing using RNA-seq data

Yi Xing, Keyan Zhao, Qing Zhou, 2013, Genome Biology.

αCP binding to a cytosine-rich subset of polypyrimidine tracts drives a novel pathway of cassette exon splicing in the mammalian transcriptome

Yi Xing, Juw Won Park, Y. Xing, 2016, Nucleic acids research.

Genomic analysis of RNA alternative splicing in cancers.

Yi Xing, Y. Xing, Yi Xing, 2007, Frontiers in bioscience : a journal and virtual library.

“Radiotranscriptomics”: A synergy of imaging and transcriptomics in clinical assessment

Alex A. T. Bui, Yi Xing, William Hsu, 2016, Quantitative Biology.

Widespread production of novel soluble protein isoforms by alternative splicing removal of transmembrane anchoring domains

Yi Xing, Christopher J. Lee, Christopher Lee, 2003, FEBS letters.

The multiassembly problem: reconstructing multiple transcript isoforms from EST fragment mixtures.

Yi Xing, Christopher J. Lee, Christopher Lee, 2004, Genome research.

Transcriptome landscape of the human placenta

Yi Xing, Keyan Zhao, Jeffrey C Murray, 2012, BMC Genomics.

Kinetics of mRNA nuclear export regulate innate immune response gene expression

Erin M. Wissink, D. Black, Y. Xing, 2022, Nature Communications.

METTL4 is an snRNA m6Am methyltransferase that regulates RNA splicing

Y. Xing, Hao Wu, R. Gregory, 2020, Cell Research.