Youfang Cao

发表

Mechanical Model of Geometric Cell and Topological Algorithm for Cell Dynamics from Single-Cell to Formation of Monolayered Tissues with Pattern

S. Kachalo, Hammad Naveed, Youfang Cao, 2015, PloS one.

Multiscale Modeling of Cellular Epigenetic States: Stochasticity in Molecular Networks, Chromatin Folding in Cell Nuclei, and Tissue Pattern Formation of Cells.

Hammad Naveed, Youfang Cao, Jieling Zhao, 2015, Critical reviews in biomedical engineering.

Nonlinear Coupling for Improved Stochastic Network Model: A Study of Schnakenberg Model

Youfang Cao, Jie Liang, 2009 .

Modeling Stochastic Gene Regulatory Networks Using Direct Solutions of Chemical Master Equation and Rare Event Sampling

Youfang Cao, Jie Liang, Anna Terebus, 2016 .

Multiscale modeling of cellular epigenetic states and tissue patterning : stochasticity in molecular network , chromatin folding in cell nucleus , and cell-cell interactions in tissue patterning

Hammad Naveed, Youfang Cao, Jie Liang, 2016 .

Dynamic cellular finite-element method for modelling large-scale cell migration and proliferation under the control of mechanical and biochemical cues: a study of re-epithelialization

Youfang Cao, Jieling Zhao, Jie Liang, 2017, Journal of The Royal Society Interface.

Probabilistic control of HIV latency and transactivation by the Tat gene circuit

A. Perelson, Youfang Cao, Jie Liang, 2018, Proceedings of the National Academy of Sciences.

Non-latching positive feedback enables robust bimodality by de-coupling expression noise from the mean

L. Weinberger, A. Perelson, Youfang Cao, 2017, bioRxiv.

Safety and Pharmacokinetics of Islatravir in Individuals with Severe Renal Insufficiency

Youfang Cao, I. de Lepeleire, S. Stoch, 2022, Antimicrobial agents and chemotherapy.

CD8+ lymphocyte control of SIV infection during antiretroviral therapy

A. Perelson, Youfang Cao, G. Silvestri, 2018, PLoS pathogens.

Exact Probability Landscapes of Stochastic Phenotype Switching in Feed-Forward Loops: Phase Diagrams of Multimodality

Youfang Cao, Jie Liang, F. Manuchehrfar, 2021, Frontiers in Genetics.

Sensitivities of Regulation Intensities in Feed-Forward Loops with Multistability

Jie Liang, Anna Terebus, Youfang Cao, 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

HIV persistence in tissue macrophages of humanized myeloid only mice during antiretroviral therapy

Youfang Cao, M. Hudgens, D. Richman, 2017, Nature Medicine.

Immune‐viral dynamics modeling for SARS‐CoV‐2 drug development

Youfang Cao, J. Stone, L. Caro, 2021, Clinical and translational science.

Dynamic mechanical finite element model of biological cells for studying cellular pattern formation

Wei Tian, Jie Liang, Youfang Cao, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

State Space Truncation with Quantified Errors for Accurate Solutions to Discrete Chemical Master Equation

Jie Liang, Anna Terebus, Youfang Cao, 2016, Bulletin of mathematical biology.

Nonlatching positive feedback enables robust bimodality by decoupling expression noise from the mean

Youfang Cao, Leor S Weinberger, Michael L Simpson, 2017, bioRxiv.

Gβ promotes pheromone receptor polarization and yeast chemotropism by inhibiting receptor phosphorylation

Youfang Cao, Jie Liang, Wei Tian, 2016, Science Signaling.

Accurate Chemical Master Equation Solution Using Multi-Finite Buffers

Jie Liang, Anna Terebus, Youfang Cao, 2016, Multiscale Model. Simul..

Understand the noise of CI expression in phage λ lysogen

Tianqi Chen, Ping Ao, Youfang Cao, 2012, Proceedings of the 31st Chinese Control Conference.

Adaptively biased sequential importance sampling for rare events in reaction networks with comparison to exact solutions from finite buffer dCME method.

Jie Liang, Youfang Cao, Youfang Cao, 2013, The Journal of chemical physics.

Mechanistic basis of post-treatment control of SIV after anti-α4β7 antibody therapy

A. Perelson, Youfang Cao, A. Galvani, 2021, PLoS Comput. Biol..

Modeling spatial population dynamics of stem cell lineage in wound healing and cancerogenesis

Jie Liang, Youfang Cao, Hammad Naveed, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Optimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability

Jie Liang, Youfang Cao, Youfang Cao, 2008, BMC Systems Biology.

Roles of regulated internalization in the polarization of cell surface receptors

Wei Tian, Jie Liang, Youfang Cao, 2014, 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

HIV persistence in tissue macrophages of humanized myeloid-only mice during antiretroviral therapy

Youfang Cao, M. Hudgens, D. Richman, 2017 .

Modeling spatial population dynamics of stem cell lineage in tissue growth

Meng Chen, Qing Nie, Yingzi Li, 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Factors Influencing COVID‐19 Risk: Insights From Molnupiravir Exposure‐Response Modeling of Clinical Outcomes

Youfang Cao, M. Rizk, R. Birger, 2023, Clinical pharmacology and therapeutics.

An optimal algorithm for enumerating state space of stochastic molecular networks with small copy numbers of molecules

Jie Liang, Youfang Cao, Youfang Cao, 2007, 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

State Space Truncation with Quantified Errors for Accurate Solutions to Discrete Chemical Master Equation

Youfang Cao, Jie Liang, A. Terebus, 2016, Bulletin of Mathematical Biology.