X. Cui

X. Cui, M. Suthanthiran, M. Goligorsky, 2012, Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.

Predictor(s) of Abnormal Array Comparative Genomic Hybridization Results in Patients with Cleft Lip and/or Palate

X. Cui, F. Mikhail, K. Rojnueangnit, 2015, The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association.

Gene expression patterns in peripheral blood cells associated with radiographic severity in African Americans with early rheumatoid arthritis

P. Gregersen, X. Cui, Martin R. Johnson, 2011, Rheumatology International.

damage after resistance loading humans despite similar levels of modest muscle Differential genomic responses in old vs. young

X. Cui, J. Atherton, J. Hawley, 2015 .

Differential genomic responses in old vs. young humans despite similar levels of modest muscle damage after resistance loading.

X. Cui, L. Dell’Italia, J. Cross, 2010, Physiological genomics.

Analysis of the tonsillar microbiome in young adults with sore throat reveals a high relative abundance of Fusobacterium necrophorum with low diversity

X. Cui, R. Centor, C. Estrada, 2018, PloS one.

Expression Signature of IFN/STAT1 Signaling Genes Predicts Poor Survival Outcome in Glioblastoma Multiforme in a Subtype-Specific Manner

X. Cui, R. Weichselbaum, Tapan Mehta, 2012, PloS one.

Alterations in gene expression and DNA methylation during murine and human lung alveolar septation.

S. Bhattacharya, X. Cui, T. Mariani, 2014, American journal of respiratory cell and molecular biology.

Brief Report: Expression of Interferon‐γ Receptor Genes in Peripheral Blood Mononuclear Cells Is Associated With Rheumatoid Arthritis and Its Radiographic Severity in African Americans

X. Cui, Martin R. Johnson, S. L. Bridges, 2015, Arthritis & rheumatology.

Multigroup Equivalence Analysis for High-Dimensional Expression Data

Alfred A. Bartolucci, Xiangqin Cui, Celeste Yang, 2015, Cancer informatics.

Methods for nutrigenomics and longevity studies in Drosophila: effects of diets high in sucrose, palmitic acid, soy, or beef.

X. Cui, A. Loraine, Xiangyi Lu, 2007, Methods in molecular biology.

Design and validation issues in RNA-seq experiments

Xiangqin Cui, Zhide Fang, X. Cui, 2011, Briefings Bioinform..

Negative binomial mixed models for analyzing microbiome count data

Lei Zhang, Nengjun Yi, Xiangqin Cui, 2017, BMC Bioinformatics.

Innate Transcriptional Networks Activated in Bladder in Response to Uropathogenic Escherichia coli Drive Diverse Biological Pathways and Rapid Synthesis of IL-10 for Defense against Bacterial Urinary Tract Infection

X. Cui, G. Ulett, A. Cripps, 2012, The Journal of Immunology.

Kidney injury accelerates cystogenesis via pathways modulated by heme oxygenase and complement.

X. Cui, Martin R. Johnson, T. Schoeb, 2012, Journal of the American Society of Nephrology : JASN.

An adaptive alpha spending algorithm improves the power of statistical inference in microarray data analysis

D. Allison, X. Cui, G. Page, 2007, Bioinformation.

Simple regression for correcting ΔCt bias in RT-qPCR low-density array data normalization

Xiangqin Cui, Maria I Danila, Martin R Johnson, 2015, BMC Genomics.

A Sequence Kernel Association Test for Dichotomous Traits in Family Samples under a Generalized Linear Mixed Model

Nengjun Yi, Xiangqin Cui, Hemant K. Tiwari, 2015, Human Heredity.

MAANOVA: A Software Package for the Analysis of Spotted cDNA Microarray Experiments

Hao Wu, Gary A. Churchill, M. Kathleen Kerr, 2003 .

Kernel‐Machine Testing Coupled with a Rank‐Truncation Method for Genetic Pathway Analysis

Nengjun Yi, Xiangqin Cui, Nianjun Liu, 2014, Genetic epidemiology.

Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1

X. Cui, B. Boone, G. Germino, 2014, Journal of Molecular Medicine.

Pdgfrb is a direct regulatory target of TGFβ signaling in atrioventricular cushion mesenchymal cells

X. Cui, K. Jiao, Dongquan Chen, 2017, PloS one.

Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1

X. Cui, B. Boone, G. Germino, 2014, Journal of Molecular Medicine.

Overexpression of innate immune response genes in a model of recessive polycystic kidney disease.

X. Cui, G. Churchill, Y. Woo, 2008, Kidney international.

Combinatorial epigenetic mechanisms and efficacy of early breast cancer inhibition by nutritive botanicals

X. Cui, P. Buckhaults, T. Tollefsbol, 2016, Epigenomics.

Whole-genome profiling highlights the molecular complexity underlying eccentric cardiac hypertrophy

X. Cui, L. Dell’Italia, J. Collawn, 2014, Therapeutic advances in cardiovascular disease.

Predicting gene expression using DNA methylation in three human populations

X. Cui, D. Zhi, Soyeon Kim, 2019, PeerJ.

Genetic and Informatic Analyses Implicate Kif12 as a Candidate Gene within the Mpkd2 Locus That Modulates Renal Cystic Disease Severity in the Cys1cpk Mouse

X. Cui, B. Aronow, T. Schoeb, 2015, PloS one.

G protein-coupled estrogen receptor regulates embryonic heart rate in zebrafish

Xiangqin Cui, X. Cui, Daniel A Gorelick, 2017, PLoS genetics.

Experimental Designs and ANOVA for Microarray Data

Richard E. Kennedy, Xiangqin Cui, X. Cui, 2011, Handbook of Statistical Bioinformatics.

Experimental Designs on High‐Throughput Biological Experiments

Xiangqin Cui, X. Cui, 2010 .

Length bias correction for RNA-seq data in gene set analyses

Kui Zhang, Xiangqin Cui, Zhide Fang, 2011, Bioinform..

Dynamic molecular and histopathological changes in the extracellular matrix and inflammation in the transition to heart failure in isolated volume overload.

X. Cui, L. Dell’Italia, A. Husain, 2011, American journal of physiology. Heart and circulatory physiology.

Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy.

X. Cui, S. Windham, J. Cross, 2013, Physiological genomics.

Portion sizes for children are predicted by parental characteristics and the amounts parents serve themselves.

Susan L. Johnson, D. Allison, X. Cui, 2014, The American journal of clinical nutrition.

Alterations in Gene Expression and DNA Methylation during Murine and Human Lung Alveolar Septation

Xiangqin Cui, Naftali Kaminski, Namasivayam Ambalavanan, 2015 .

Elevated Heme Oxygenase-1 Correlates With Increased Brain Iron Deposition Measured by Quantitative Susceptibility Mapping and Decreased Hemoglobin in Patients With Parkinson’s Disease

X. Cui, Yanqiu Feng, Yunqi Xu, 2021, Frontiers in Aging Neuroscience.

A Fucus vesiculosus extract inhibits estrogen receptor activation and induces cell death in female cancer cell lines

X. Cui, C. Skibola, W. Grizzle, 2016, BMC Complementary and Alternative Medicine.

Renal CD14 expression correlates with the progression of cystic kidney disease.

X. Cui, Martin R. Johnson, T. Schoeb, 2010, Kidney international.

Validation of Endogenous Internal Real-Time PCR Controls in Renal Tissues

X. Cui, Martin R. Johnson, J. Qiu, 2009, American Journal of Nephrology.

The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle

David B. Allison, Xiangqin Cui, Jelai Wang, 2007, Endocrine.

Simple regression for correcting ΔCt bias in RT-qPCR low-density array data normalization

X. Cui, Martin R. Johnson, S. L. Bridges, 2015, BMC Genomics.

Exploration of low-dose estrogen effects: identification of No Observed Transcriptional Effect Level (NOTEL).

Xiangqin Cui, Lee Bennett, Cynthia A Afshari, 2004, Toxicologic pathology.

Evaluation of a Statistical Equivalence Test Applied to Microarray Data

Xiangqin Cui, X. Cui, J. Qiu, 2010, Journal of biopharmaceutical statistics.

Collective effects of long-range DNA methylations predict gene expressions and estimate phenotypes in cancer

X. Cui, H. Park, D. Zhi, 2020, Scientific Reports.

Kinesin family member 12 is a candidate polycystic kidney disease modifier in the cpk mouse.

X. Cui, G. Churchill, Renhua Li, 2005, Journal of the American Society of Nephrology : JASN.

Associations Between Race, Perceived Psychological Stress, and the Gut Microbiota in a Sample of Generally Healthy Black and White Women: A Pilot Study on the Role of Race and Perceived Psychological Stress

X. Cui, E. Lefkowitz, C. Morrow, 2018, Psychosomatic medicine.

How Many Mice and How Many Arrays? Replication in Mouse cDNA Microarray Experiments

Xiangqin Cui, Gary A. Churchill, X. Cui, 2004 .

HIV-1 gp140 epitope recognition is influenced by immunoglobulin DH gene segment sequence

X. Cui, H. Liao, B. Haynes, 2015, Immunogenetics.

Mechanisms of sphingosine‐1‐phosphate‐mediated vasoconstriction of rat afferent arterioles

X. Cui, E. Inscho, X. Cui, 2018, Acta physiologica.

Predicting gene expression using DNA methylation in two human populations

X. Cui, D. Zhi, Soyeon Kim, 2018 .

Expression of Interferon-γ Receptor Genes in Peripheral Blood Mononuclear Cells Is Associated With Rheumatoid Arthritis and Its Radiographic Severity in African Americans.

X. Cui, Martin R. Johnson, S. L. Bridges, 2015, Arthritis & Rheumatology.

G protein-coupled estrogen receptor regulates heart rate and heart valve thickness in zebrafish

X. Cui, Hailey E Edwards, J. Souder, 2016, bioRxiv.

X. Cui, Kimberly B. Ulett, G. Ulett, 2012, Infection and Immunity.

BCRgt: a Bayesian cluster regression-based genotyping algorithm for the samples with copy number alterations

Xiangqin Cui, Zhide Fang, Shengping Yang, 2014, BMC Bioinformatics.

Length bias correction for RNA-seq data in gene set analyses

X. Cui, Kui Zhang, Zhide Fang, 2011, Bioinform..