S. Potter

发表

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

Simon C. Potter, P. Donnelly, C. Spencer, 2007, Nature.

The Ensembl analysis pipeline.

S. Searle, S. Potter, M. Clamp, 2004, Genome research.

Initial sequencing and comparative analysis of the mouse genome.

Colin N. Dewey, Simon C. Potter, James A. Cuff, 2002 .

Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes

Tanya M. Teslovich, Andrew D. Johnson, Ayellet V. Segrè, 2012, Nature Genetics.

The Architecture of Gene Regulatory Variation across Multiple Human Tissues: The MuTHER Study

Simon C. Potter, T. Spector, M. McCarthy, 2011, PLoS genetics.

Mapping cis- and trans-regulatory effects across multiple tissues in twins

Simon C. Potter, T. Spector, J. Bell, 2012, Nature Genetics.

The Ensembl genome database project

Philip Lijnzaad, Alistair G. Rust, Matthew R. Pocock, 2002, Nucleic Acids Res..

Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants

Simon C. Potter, David M. Evans, P. Donnelly, 2007, Nature Genetics.

Genome-wide Association Analysis Identifies 14 New Risk Loci for Schizophrenia

Simon C. Potter, M. Pirinen, P. Donnelly, 2013, Nature Genetics.

An overview of Ensembl.

Simon C. Potter, James A. Cuff, R. Durbin, 2004, Genome research.

Excessive burden of lysosomal storage disorder gene variants in Parkinson’s disease

Simon C. Potter, Miguel Ángel Martínez, C. Spencer, 2017, Brain : a journal of neurology.

Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease

Sarah Edkins, Cisca Wijmenga, Lude Franke, 2011, Nature Genetics.

The Metabochip, a Custom Genotyping Array for Genetic Studies of Metabolic, Cardiovascular, and Anthropometric Traits

Tanya M. Teslovich, Simon C. Potter, Cameron D. Palmer, 2012, PLoS genetics.

The EMBL-EBI search and sequence analysis tools APIs in 2019

Simon C. Potter, S. Potter, R. Finn, 2019, Nucleic Acids Res..

Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

Simon C. Potter, Joseph T. Glessner, M. Pirinen, 2011, Nature.

Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

Judy H. Cho, John P. Ferguson, G. Wainrib, 2019, Scientific Reports.

Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility

Tanya M. Teslovich, Andrew D. Johnson, Kyle J. Gaulton, 2014, Nature Genetics.

Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region

P. Donnelly, C. Spencer, C. Freeman, 2010 .

Multiple sclerosis genomic map implicates peripheral immune cells and microglia in susceptibility

Simon C. Potter, Till F. M. Andlauer, M. Pirinen, 2019, Science.

Genomic Dissection of Bipolar Disorder and Schizophrenia, Including 28 Subphenotypes

John P. Rice, Melissa J. Green, Robert C. Thompson, 2017, Cell.

Dissection of the genetics of Parkinson ’ s disease identifies an additional association 5 ′ of SNCA and multiple associated haplotypes at 17 q 21 The UK Parkinson ’ s Disease Consortium and The Wellcome Trust Case Control Consortium 2

M. Pirinen, P. Donnelly, L. Peltonen, 2010 .

Using genome-Wwide complex trait analysis to quantify 'missing heritability' in Parkinson's disease

M. Pirinen, P. Donnelly, C. Spencer, 2012 .

MGnify: the microbiome analysis resource in 2020

Robert D. Finn, Guy Cochrane, Alex L. Mitchell, 2019, Nucleic Acids Res..

Common variants near MC4R are associated with fat mass, weight and risk of obesity

Subhajyoti De, Inês Barroso, Philippe Froguel, 2008, Nature Genetics.

Dissection of the genetics of Parkinson's disease identifies an additional association 5′ of SNCA and multiple associated haplotypes at 17q21

Matti Pirinen, Peter Donnelly, Robert Plomin, 2010, Human molecular genetics.

Genome-wide and fine-resolution association analysis of malaria in West Africa

Peter Donnelly, Michael Inouye, Giorgio Sirugo, 2009, Nature Genetics.

A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1

Matti Pirinen, Peter Donnelly, Robert Plomin, 2010, Nature Genetics.

Biopipe: a flexible framework for protocol-based bioinformatics analysis.

Shawn Hoon, Simon Potter, Arne Stabenau, 2003, Genome research.

A novel variant on chromosome 7q22.3 associated with mean platelet volume, counts, and function.

Simon C. Potter, Chris I. Jones, C. Gieger, 2009, Blood.

MiR-137-derived polygenic risk: effects on cognitive performance in patients with schizophrenia and controls

Simon C. Potter, M. Pirinen, P. Donnelly, 2017, Translational Psychiatry.

Differential methylation of the TRPA1 promoter in pain sensitivity

Chrysanthi Ainali, Frank O. Nestle, Sophia Tsoka, 2014, Nature Communications.

Genomic dissection of bipolar disorder and schizophrenia including 28 subphenotypes 1 2 Primary

John P. Rice, Melissa J. Green, Robert C. Thompson, 2018 .

A ‘‘Candidate-Interactome’’ Aggregate Analysis of Genome-Wide Association Data in Multiple Sclerosis

Barcellos, Haitao, Leena, 2013 .

Genomic Dissection of Bipolar Disorder and Schizophrenia, Including 28 Subphenotypes

John P. Rice, Melissa J. Green, Robert C. Thompson, 2017, Cell.

Discovery and functional prioritization of Parkinson’s disease candidate genes from large-scale whole exome sequencing

Jean-François Dartigues, Günther Deuschl, Yoav Ben-Shlomo, 2017, Genome Biology.

New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk

Christian Gieger, Alex Doney, Inês Barroso, 2010, Nature Genetics.

Erratum: New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk (Nature Genetics (2010) 42 (105-116))

Marc S. Orr, P. Elliott, L. Coin, 2010 .

Author Correction: Cross-ancestry genome-wide association analysis of corneal thickness strengthens link between complex and Mendelian eye diseases

M. Pirinen, P. Donnelly, C. Spencer, 2019, Nature Communications.

A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium

Christian Gieger, Uwe Völker, Mario Falchi, 2009, Nature Genetics.

Identification of 15 new psoriasis susceptibility loci highlights the role of innate immunity

Matti Pirinen, Christian Gieger, Peter Donnelly, 2012 .

Meta-Analysis of Genome-Wide Scans for Human Adult Stature Identifies Novel Loci and Associations with Measures of Skeletal Frame Size

Inês Barroso, Kourosh R. Ahmadi, Nicole Soranzo, 2009, PLoS genetics.

EBI’s Metagenomics Pipeline: Moving towards cloud computing

Robert D. Finn, Alex L. Mitchell, Simon C. Potter, 2016 .

Large-Scale Gene-Centric Analysis Identifies Novel Variants for Coronary Artery Disease

Simon C. Potter, Thomas W. Mühleisen, Benjamin J. Wright, 2011, PLoS genetics.

The Pfam protein families database: towards a more sustainable future

Robert D. Finn, Sean R. Eddy, Marco Punta, 2015, Nucleic Acids Res..

A Two-Stage Meta-Analysis Identifies Several New Loci for Parkinson's Disease

Simon C. Potter, M. Pirinen, D. Hernandez, 2011, PLoS genetics.

The Pfam protein families database in 2019

Silvio C. E. Tosatto, Robert D. Finn, Sean R. Eddy, 2018, Nucleic Acids Res..

HMMER web server: 2018 update

Robert D. Finn, Sean R. Eddy, Rodrigo Lopez, 2018, Nucleic Acids Res..

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Robert D. Finn, 2018, Nucleic Acids Res..

InterPro in 2017—beyond protein family and domain annotations

Silvio C. E. Tosatto, Neil D. Rawlings, Huaiyu Mi, 2016, Nucleic Acids Res..

Ensembl 2004

Damian Smedley, Heikki Lehväslaiho, Yuan Chen, 2004, Nucleic Acids Res..

Interaction between ERAP1 and HLA-B27 in ankylosing spondylitis implicates peptide handling in the mechanism for HLA-B27 in disease susceptibility

Paul Weston, Robert Plomin, Elvira Bramon, 2011, Nature Genetics.

A genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease

Mark I. McCarthy, Philippe Froguel, Paul Elliott, 2011, Nature Genetics.

Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

Judy H. Cho, John P. Ferguson, G. Wainrib, 2019, Scientific Reports.

A Genome-wide Association Analysis of a Broad Psychosis Phenotype Identifies Three Loci for Further Investigation

M. Pirinen, P. Donnelly, C. Spencer, 2014, Biological Psychiatry.

Variants in MTNR1B influence fasting glucose levels

Inês Barroso, Paul Scheet, Nicole Soranzo, 2009, Nature Genetics.

A polygenic resilience score moderates the genetic risk for schizophrenia

M. Pirinen, P. Donnelly, C. Spencer, 2019, Molecular Psychiatry.

Genetic Determinants of Major Blood Lipids in Pakistanis Compared With Europeans

Simon C. Potter, J. Danesh, P. Deloukas, 2010, Circulation. Cardiovascular genetics.

Genetic Determinants of Major Blood Lipids in Pakistan Is Compared with Europeans Running title: Saleheen et al.; Genetic loci for major lipids in Pakistan

Willem, Simon C. Potter, Saleem, 2010 .

Genetic loci for major lipids in Pakistan

Fazal-ur-Rehman, Simon C. Potter, J. Danesh, 2010 .

Ensembl 2002: accommodating comparative genomics

Alistair G. Rust, Heikki Lehväslaiho, Eduardo Eyras, 2003, Nucleic Acids Res..

Abdominal aortic aneurysm is associated with a variant in low-density lipoprotein receptor-related protein 1.

Simon C. Potter, Benjamin J. Wright, T. Assimes, 2011, American journal of human genetics.

Genome-wide association study of intraocular pressure identifies the GLCCI1/ICA1 region as a glaucoma susceptibility locus

M. Pirinen, P. Donnelly, C. Spencer, 2013, Human molecular genetics.

Genetic variation influencing DNA methylation provides insights into molecular mechanisms regulating genomic function

Johann S. Hawe, David A. Knowles, Simon C. Potter, 2022, Nature Genetics.

Ensembl 2005

Damian Smedley, Ewan Birney, Javier Herrero, 2004, Nucleic Acids Res..

Complement genes contribute sex-biased vulnerability in diverse illnesses

Simon C. Potter, Christopher W. Whelan, M. Pirinen, 2020, Nature.

Shared Genetic Risk Factors of Intracranial, Abdominal, and Thoracic Aneurysms

Cue Hyunkyu Lee, Gao T. Wang, Benjamin J. Wright, 2016, Journal of the American Heart Association : Cardiovascular and Cerebrovascular Disease.

Identification of new susceptibility loci for osteoarthritis (arcOGEN): a genome-wide association study

Andres Metspalu, Michael Doherty, Nigel Arden, 2012, The Lancet.

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

Robert D. Finn, Zicheng Liu, Alessandro Vullo, 2017, Nucleic Acids Res..

Characterization of functional methylomes by next-generation capture sequencing identifies novel disease-associated variants

David A. Knowles, Simon C. Potter, T. Spector, 2015, Nature Communications.

Common variants at the MHC locus and at chromosome 16q24.1 predispose to Barrett’s esophagus

Simon C. Potter, M. Pirinen, P. Donnelly, 2012, Nature Genetics.

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies

Robert D. Finn, Gustavo A. Salazar, Guy Cochrane, 2017, Nucleic Acids Res..

Genome-Wide Association Study Implicates HLA-C * 01 : 02 as a Risk Factor at the Major Histocompatibility Complex Locus in Schizophrenia Irish Schizophrenia Genomics

Kelleher, P. Deloukas, E. Bramon, 2012 .

Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size SORANZO

A. Hofman, A. Uitterlinden, P. Deloukas, 2019 .

Correction: The Metabochip, a Custom Genotyping Array for Genetic Studies of Metabolic, Cardiovascular, and Anthropometric Traits

Tanya M. Teslovich, Simon C. Potter, Cameron D. Palmer, 2013, PLoS Genetics.

A Variant in LDLR Is Associated With Abdominal Aortic Aneurysm

Simon C. Potter, Benjamin J. Wright, P. Deloukas, 2013, Circulation. Cardiovascular genetics.

Using genome-wide complex trait analysis to quantify ‘ missing heritability ’ in Parkinson ’ s disease

Simon C. Potter, M. Pirinen, P. Deloukas, 2012 .

Association of the 9p21.3 Locus With Risk of First-Ever Myocardial Infarction in Pakistanis: Case-Control Study in South Asia and Updated Meta-Analysis of Europeans

Simon C. Potter, J. Danesh, P. Deloukas, 2010, Arteriosclerosis, thrombosis, and vascular biology.

EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data

Robert D. Finn, Matthew Fraser, Guy Cochrane, 2015, Nucleic Acids Res..

Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins

Matti Pirinen, David M. Herrington, Alex Doney, 2014, Nature Communications.

InterProScan: Protein sequence analysis and classification

S. Potter, R. Finn, A. Mitchell, 2017 .

Meta-analysis of genome-wide association studies identifies novel loci that influence cupping and the glaucomatous process

Adriana I. Iglesias, M. Pirinen, P. Donnelly, 2014, Nature Communications.

Insights into the genetic architecture of osteoarthritis from stage 1 of the arcOGEN study

Simon C. Potter, Bjarni V. Halldórsson, A. Hofman, 2010, Annals of the rheumatic diseases.

Complement genes contribute sex-biased vulnerability in diverse disorders

Christopher W. Whelan, M. Pirinen, C. Spencer, 2020, Nature.

Using ancestry-informative markers to identify fine structure across 15 populations of European origin

Graham M Lord, Günter P. Wagner, I. Ntalla, 2014, European Journal of Human Genetics.

Rare and functional SIAE variants are not associated with autoimmune disease risk in up to 66,924 individuals of European ancestry

Tariq Ahmad, Sarah Edkins, Christopher G Mathew, 2011, Nature Genetics.

The correlation between reading and mathematics ability at age twelve has a substantial genetic component

Matti Pirinen, Peter Donnelly, Robert Plomin, 2014, Nature Communications.

Exome-wide study of ankylosing spondylitis demonstrates additional shared genetic background with inflammatory bowel disease

Simon C. Potter, M. Pirinen, C. Spencer, 2016, npj Genomic Medicine.

Discovery and functional prioritization of Parkinson’s disease candidate genes from large-scale whole exome sequencing

Simon C. Potter, Miguel Ángel Martínez, C. Spencer, 2017, Genome Biology.

Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility

Tanya M. Teslovich, Andrew D. Johnson, Kyle J. Gaulton, 2014 .

Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes

Tanya M. Teslovich, Andrew D. Johnson, Simon C. Potter, 2012, Nature Genetics.

A Genome-Wide Association Search for Type 2 Diabetes Genes in African Americans

Simon C. Potter, Nicholette D. Palmer, Joshua P. Lewis, 2012, PLoS ONE.

Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants.

P. Donnelly, C. Spencer, A. Silman, 2007, Nature genetics.

Genomic Dissection of Bipolar Disorder and Schizophrenia, Including 28 Subphenotypes.

John P. Rice, Simon C. Potter, Melissa J. Green, 2018, Cell.

Novel Loci for Adiponectin Levels and Their Influence on Type 2 Diabetes and Metabolic Traits: A Multi-Ethnic Meta-Analysis of 45,891 Individuals

Karen L. Mohlke, Luigi Ferrucci, Florian Kronenberg, 2012, PLoS genetics.

Loss of VPS13C Function in Autosomal-Recessive Parkinsonism Causes Mitochondrial Dysfunction and Increases PINK1/Parkin-Dependent Mitophagy.

Simon C. Potter, Miguel Ángel Martínez, C. Spencer, 2016, American journal of human genetics.

Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility

Tanya M. Teslovich, J. Pankow, M. McCarthy, 2014 .

New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk

Simon C. Potter, P. Elliott, M. Jarvelin, 2010, Nature Genetics.

Localization of type 1 diabetes susceptibility to the MHC class I genes HLA-B and HLA-A

Simon C. Potter, C. Spencer, A. Silman, 2007, Nature.

Meta-analysis of Immunochip data of four autoimmune diseases reveals novel single-disease and cross-phenotype associations

Vincent H. Everett, Annette Lee, P. Gregersen, 2018, Genome Medicine.

Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region

Simon C. Potter, P. Donnelly, C. Spencer, 2009, Nature Genetics.

Genome-wide and fine-resolution association analysis of malaria in West Africa

P. Donnelly, P. Deloukas, J. Marchini, 2009, Nature Genetics.

Cross-ancestry genome-wide association analysis of corneal thickness strengthens link between complex and Mendelian eye diseases

Simon C. Potter, Adriana I. Iglesias, M. Pirinen, 2018, Nature Communications.

Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants

P. Donnelly, C. Spencer, A. Silman, 2007, Nature Genetics.