P. Uetz

发表

A network of protein–protein interactions in yeast

B. Schwikowski, P. Uetz, S. Fields, 2000, Nature Biotechnology.

A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae

James R. Knight, J. Rothberg, T. Kalbfleisch, 2000, Nature.

Herpesviral Protein Networks and Their Interaction with the Human Proteome

B. Berger, P. Uetz, Yu-An Dong, 2006, Science.

Visualization and Integration of Protein Interaction Networks”, in Protein-Protein Interactions Second Edition: A Molecular Cloning Manual, E. Golemis and P. Adams eds

P. Uetz, T. Ideker, K. Tan, 2005 .

From protein networks to biological systems

P. Uetz, R. Finley, 2005, FEBS letters.

The elusive yeast interactome

P. Uetz, Johannes Goll, 2006, Genome Biology.

What do we learn from high-throughput protein interaction data?

P. Uetz, M. Schlesner, B. Titz, 2004, Expert review of proteomics.

The binary protein-protein interaction landscape of Escherichia coli

P. Uetz, A. Emili, James Vlasblom, 2014, Nature Biotechnology.

Protein-protein interactions of human viruses

Peter Uetz, Stefan Wuchty, Norman Goodacre, 2018, Seminars in Cell & Developmental Biology.

Towards an understanding of complex protein networks.

P. Uetz, J. Gera, C. Tucker, 2001, Trends in cell biology.

The Binary Protein Interactome of Treponema pallidum – The Syphilis Spirochete

P. Uetz, S. Rajagopala, Johannes Goll, 2008, PloS one.

High-throughput screening for protein-protein interactions using two-hybrid assay.

P. Uetz, S. Fields, G. Cagney, 2000, Methods in enzymology.

Global landscape of cell envelope protein complexes in Escherichia coli

Daniel J. Burnside, P. Uetz, A. Emili, 2017, Nature Biotechnology.

The protein interaction map of bacteriophage lambda

Peter Uetz, Seesandra V Rajagopala, P. Uetz, 2011, BMC Microbiology.

The Escherichia coli K-12 ORFeome: a resource for comparative molecular microbiology

Peter Uetz, James C. Hu, Seesandra V Rajagopala, 2010, BMC Genomics.

Transcriptional activators in yeast

Peter Uetz, Björn Titz, Seesandra V. Rajagopala, 2006, Nucleic acids research.

Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

Peter Uetz, Roman Häuser, P. Uetz, 2010, Proteome Science.

A comparison and optimization of yeast two-hybrid systems.

Peter Uetz, P. Uetz, J. Caufield, 2012, Methods.

A Second-generation Protein–Protein Interaction Network of Helicobacter pylori*

Peter Uetz, Roman Häuser, Seesandra V Rajagopala, 2014, Molecular & Cellular Proteomics.

Protein-protein Interaction Networks of E. coli and S. cerevisiae are similar

Peter Uetz, S. Wuchty, P. Uetz, 2014, Scientific Reports.

The Protein Interactome of Mycobacteriophage Giles Predicts Functions for Unknown Proteins

P. Uetz, G. Hatfull, J. Mehla, 2015, Journal of bacteriology.

Global approaches to study protein-protein interactions among viruses and hosts.

Peter Uetz, P. Uetz, Jorge D Mendez-Rios, 2010, Future microbiology.

From ORFeomes to Protein Interaction Maps in Viruses Material Supplemental

Peter Uetz, Seesandra V Rajagopala, Yu-An Dong, 2004 .

Improving yeast two-hybrid screening

P. Uetz, 2008 .

Improving yeast two-hybrid screening systems.

Peter Uetz, P. Uetz, M. Koegl, 2008, Briefings in functional genomics & proteomics.

The yeast interactome ( unit : g 303204 )

P. Uetz, A. Grigoriev, 2004 .

Bacteriophage protein-protein interactions.

P. Uetz, S. Casjens, Roman Häuser, 2012, Advances in virus research.

The Escherichia coli protein YjjG is a house-cleaning nucleotidase in vivo.

P. Uetz, B. Titz, Roman Häuser, 2007, FEMS microbiology letters.

Molecular Interaction between Limb Deformity Proteins (Formins) and Src Family Kinases*

P. Uetz, R. Zeller, S. Fumagalli, 1996, The Journal of Biological Chemistry.

The phosphocarrier protein HPr of the bacterial phosphotransferase system globally regulates energy metabolism by directly interacting with multiple enzymes in Escherichia coli

P. Uetz, A. Emili, M. Babu, 2017, The Journal of Biological Chemistry.

Proteome Data Improves Protein Function Prediction in the Interactome of Helicobacter pylori *

P. Uetz, S. Wuchty, P. Aloy, 2018, Molecular & Cellular Proteomics.

Genome Annotation and Intraviral Interactome for the Streptococcus pneumoniae Virulent Phage Dp-1

M. Ouellette, P. Uetz, B. Titz, 2010, Journal of bacteriology.

Compass Study of Biological Complexity Publications Center for the Study of Biological Complexity 2015 Protein Complexes in Bacteria

P. Uetz, J. Caufield, Christopher Wimble, 2017 .

Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications

Lennart Martens, Stefano Toppo, Geoffrey C. Fox, 2013, Big Data.

The disconnect between DNA and species names: lessons from reptile species in the NCBI taxonomy database.

Detlef D. Leipe, P. Uetz, D. Leipe, 2019, Zootaxa.

A roadmap for the functional annotation of protein families: a community perspective

Benjamin M. Gyori, Lucy J. Colwell, Ian K. Blaby, 2022, Database J. Biol. Databases Curation.

The Nitrogen Regulatory PII Protein (GlnB) and N-Acetylglucosamine 6-Phosphate Epimerase (NanE) Allosterically Activate Glucosamine 6-Phosphate Deaminase (NagB) in Escherichia coli

P. Uetz, A. Emili, M. Babu, 2017, Journal of bacteriology.

The Proteome and Interactome of Streptococcus pneumoniae Phage Cp-1

P. Uetz, S. Moineau, Mourad Sabri, 2011, Journal of bacteriology.

Vectors for expression of protein-A-tagged proteins in vertebrate cells.

P. Uetz, R. Zeller, 1996, Analytical biochemistry.

Virus-host protein-protein interactions of mycobacteriophage Giles

P. Uetz, J. Wagemans, G. Hatfull, 2017, Scientific Reports.

A global catalog of primary reptile type specimens.

Sami R. Cherikh, P. Uetz, F. Glaw, 2019, Zootaxa.

p rotein interaction data curation: the i nternational m olecular exchange (ime x) consortium

Peter Uetz, Igor Jurisica, Henning Hermjakob, 2012 .

The original descriptions of reptiles and their subspecies.

P. Uetz, Alexandrea Stylianou, 2018, Zootaxa.

The original descriptions of reptiles

P. Uetz, 2010 .

Global Taxonomic Diversity of Living Reptiles

P. Uetz, A. Bauer, Shai Meiri, 2013, PloS one.

Stable isotope labeling by amino acids in cell culture based proteomics reveals differences in protein abundances between spiral and coccoid forms of the gastric pathogen Helicobacter pylori.

P. Uetz, S. Kalkhof, C. Sharma, 2015, Journal of proteomics.

TheEscherichiacoli proteinYjjG is a house-cleaning nucleotidase invivo

P. Uetz, B. Titz, Anne Engelbrecher, 2007 .

Regulation of Stress Response Signaling by the N-terminal Dishevelled/EGL-10/Pleckstrin Domain of Sst2, a Regulator of G Protein Signaling in Saccharomyces cerevisiae *

Peter Uetz, Stanley Fields, Christopher Aston, 2002, The Journal of Biological Chemistry.

Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes

P. Uetz, W. Warren, S. Secor, 2011, Genome Biology.

Extinct, obscure or imaginary: The lizard species with the smallest ranges

P. Uetz, M. Lebreton, A. Bauer, 2017, Diversity and Distributions.

An ontology for microbial phenotypes

Peter Uetz, James C. Hu, Marcus C Chibucos, 2014, BMC Microbiology.

Toward more transparent and reproducible omics studies through a common metadata checklist and data publications.

Lennart Martens, Doron Lancet, Dmitrij Frishman, 2014, Omics : a journal of integrative biology.

TOWARD MORE TRANSPARENT AND REPRODUCIBLE

Robert L. Grossman, Lennart Martens, Doron Lancet, 2013 .

Benchmarking yeast two‐hybrid systems using the interactions of bacterial motility proteins

Peter Uetz, Seesandra Venkatappa Rajagopala, P. Uetz, 2009, Proteomics.

MPI-LIT: a literature-curated dataset of microbial binary protein--protein interactions

Johannes Goll, Peter Uetz, Björn Titz, 2008, Bioinform..

Experimental Methods for Protein Interaction Identification and Characterization

Peter Uetz, Gerard Cagney, Björn Titz, 2008, Protein-protein Interactions and Networks.

CONTENTS Biological significance of protein – protein interactions Generation of protein – protein interaction data Topology of protein interaction networks Evolution of protein interaction networks Comparative interactomics : predicting homologous interactions Protein interaction networks for medic

P. Uetz, M. Schlesner, B. Titz, 2004 .

Review Marine Reptiles

P. Uetz, John C. Murphy, A. Rasmussen, 2017 .

Marine Reptiles

Peter Uetz, P. Uetz, John C. Murphy, 2011, PloS one.

The global distribution of tetrapods reveals a need for targeted reptile conservation

Peter Uetz, Ben Collen, Richard Grenyer, 2017, Nature Ecology & Evolution.

The FF domains of yeast U1 snRNP protein Prp40 mediate interactions with Luc7 and Snu71

Peter Uetz, P. Uetz, Claudia Ester, 2008, BMC Biochemistry.

Protein Domains of Unknown Function Are Essential in Bacteria

Peter Uetz, Dietlind L. Gerloff, P. Uetz, 2013, mBio.

The Spindle Pole Body Assembly Component Mps3p/Nep98p Functions in Sister Chromatid Cohesion*

P. Uetz, S. Fields, M. Kenna, 2004, Journal of Biological Chemistry.

Protein Complexes in Bacteria

Peter Uetz, J. Harry Caufield, Marco Abreu, 2015, PLoS Comput. Biol..

Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

Johannes Goll, Peter Uetz, Igor Jurisica, 2012, Nature Methods.

The Protein Interactome of Streptococcus pneumoniae and Bacterial Meta-interactomes Improve Function Predictions

P. Uetz, S. Rajagopala, S. Wuchty, 2017, mSystems.

Two-Hybrid and Related Systems

P. Uetz, J. Caufield, N. Sakhawalkar, 2017 .

Bacterial protein meta-interactomes predict cross-species interactions and protein function

Peter Uetz, Stefan Wuchty, J. Harry Caufield, 2017, BMC Bioinformatics.

The Protein Interactome of Glycolysis in Escherichia coli

P. Uetz, M. Saier, Shomeek Chowdhury, 2021, Proteomes.

The minimum information required for reporting a molecular interaction experiment (MIMIx)

Peter Woollard, Mark Gerstein, Gary D Bader, 2007, Nature Biotechnology.

Predicting nsSNPs that Disrupt Protein-Protein Interactions Using Docking

Cathy H. Wu, Peter Uetz, Nathan Edwards, 2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Docking features for predicting binding loss due to protein mutation

Cathy H. Wu, Peter Uetz, Nathan Edwards, 2014, BCB.

The Protein Interaction Network of Bacteriophage Lambda with Its Host, Escherichia coli

P. Uetz, S. Rajagopala, S. Wuchty, 2013, Journal of Virology.

The protein network of bacterial motility

Johannes Goll, Peter Uetz, Seesandra V Rajagopala, 2007 .

The Hepatitis E virus intraviral interactome

P. Uetz, A. Baiker, C. Friedel, 2015, Scientific Reports.

The E. coli Effector Protein NleF Is a Caspase Inhibitor

P. Uetz, D. Ullmann, Gabriella Siszler, 2013, PloS one.

ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis

P. Uetz, G. Montelione, S. Phanse, 2021, The Journal of biological chemistry.

YhcB (DUF1043), a novel cell division protein conserved across gamma-proteobacteria

P. Uetz, G. Montelione, S. Phanse, 2021, bioRxiv.

Organisation of the murine 5‐HT3 receptor gene and assignment tohuman chromosome 11

P. Uetz, G. Rappold, B. Weiss, 1994, FEBS letters.

Bam35 Tectivirus Intraviral Interaction Map Unveils New Function and Localization of Phage ORFan Proteins

P. Uetz, M. Salas, J. Mehla, 2017, Journal of Virology.

A Comparison of Two-Hybrid Approaches for Detecting Protein-Protein Interactions.

P. Uetz, J. Mehla, J. Caufield, 2017, Methods in enzymology.

Mapping protein-protein interactions using yeast two-hybrid assays.

Peter Uetz, Jitender Mehla, J Harry Caufield, 2015, Cold Spring Harbor protocols.

Functional elucidation of antibacterial phage ORFans targeting Pseudomonas aeruginosa

A. Aertsen, P. Uetz, R. Lavigne, 2014, Cellular microbiology.

Yeast Two-Hybrid Screens: Improvement of Array-Based Screening Results by N- and C-terminally Tagged Fusion Proteins

Peter Uetz, Roman Häuser, Thorsten Stellberger, 2011, Methods in molecular biology.

Array-based yeast two-hybrid screens: a practical guide.

Peter Uetz, Roman Häuser, Thorsten Stellberger, 2012, Methods in molecular biology.

Analysis of protein-protein interactions using high-throughput yeast two-hybrid screens.

Peter Uetz, Seesandra V Rajagopala, P. Uetz, 2011, Methods in molecular biology.

Analysis of protein-protein interactions using array-based yeast two-hybrid screens.

Peter Uetz, Seesandra V Rajagopala, P. Uetz, 2009, Methods in molecular biology.

7 Array-Based Yeast Two-Hybrid Screening for Protein–Protein Interactions

P. Uetz, S. Rajagopala, B. Titz, 2007 .

The Yeast Two-Hybrid System for Detecting Interacting Proteins

Peter Uetz, Erica A. Golemis, Ilya G. Serebriiskii, 2005 .

The Phox Homology (PX) Domain Protein Interaction Network in Yeast*S

Carolina S. Vollert, P. Uetz, 2004, Molecular & Cellular Proteomics.

High‐Throughput Screening for Protein‐Protein Interactions Using Yeast Two‐Hybrid Arrays

P. Uetz, G. Cagney, G Cagney, 2001, Current protocols in protein science.

The yeast G protein alpha subunit Gpa1 transmits a signal through an RNA binding effector protein Scp160.

Peter Uetz, Stanley Fields, Christopher Aston, 2003, Molecular cell.

Studying protein complexes by the yeast two-hybrid system.

Peter Uetz, Andrey Tovchigrechko, Seesandra V Rajagopala, 2012, Methods.

Molecular taxonomy: Species disconnected from DNA sequences

P. Uetz, Akhil Garg, 2017, Nature.

Author Correction: The global distribution of tetrapods reveals a need for targeted reptile conservation

P. Uetz, C. Orme, M. Lebreton, 2017, Nature Ecology & Evolution.

Matrix-based yeast two-hybrid screen strategies and comparison of systems.

Peter Uetz, Roman Häuser, Thorsten Stellberger, 2012, Methods in molecular biology.

Two-hybrid arrays.

P. Uetz, 2002, Current opinion in chemical biology.

Comparison of classification methods on protein-protein interaction document classification

Guixian Xu, Zhendong Niu, Xu Gao, 2008, 2008 IEEE International Conference on Bioinformatics and Biomeidcine Workshops.

Protein-Protein-Wechselwirkungen

P. Uetz, D. Klostermeier, U. Curth, 2021, Bioanalytik.

The yeast two-hybrid system: a tool for mapping protein-protein interactions.

Peter Uetz, Jitender Mehla, J Harry Caufield, 2015, Cold Spring Harbor protocols.

Making the Right Choice: Critical Parameters of the Y2H Systems.

Peter Uetz, Jitender Mehla, J Harry Caufield, 2018, Methods in molecular biology.

E. coli allantoinase is activated by the downstream metabolic enzyme, glycerate kinase, and stabilizes the putative allantoin transporter by direct binding

P. Uetz, M. Babu, Zhongge Zhang, 2023, Scientific reports.

The EHEC-host interactome reveals novel targets for the translocated intimin receptor

Peter Uetz, Roman Häuser, Patrick Aloy, 2014, Scientific Reports.

The interactome of human EGF/ErbB receptors

P. Uetz, I. Stagljar, 2006 .

Exhaustive benchmarking of the yeast two-hybrid system

Peter Uetz, Thorsten Stellberger, Seesandra Venkatappa Rajagopala, 2010, Nature Methods.

The interactome of Streptococcus pneumoniae and its bacteriophages show highly specific patterns of interactions among bacteria and their phages

P. Uetz, S. Wuchty, Rachelle A. Mariano, 2016, Scientific Reports.

Two-hybrid analysis of the Saccharomyces cerevisiae 26S proteasome.

P. Uetz, S. Fields, G. Cagney, 2001, Physiological genomics.

Corrigendum: Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

Shelby L. Bidwell, M. Tyers, P. Uetz, 2012, Nature Methods.

MPIDB: the microbial protein interaction database

Peter Uetz, Brian T. Lamb, Johannes Goll, 2008, Bioinform..

Databases and ontologies MPIDB : the microbial protein interaction database

Hank C Wu, P. Uetz, S. Rajagopala, 2008 .

Ubiquitin-like Protein Hub1 Is Required for Pre-mRNA Splicing and Localization of an Essential Splicing Factor in Fission Yeast

P. Uetz, P. Uetz, N. Jones, 2004, Current Biology.

The uridylyltransferase GlnD and tRNA modification GTPase MnmE allosterically control Escherichia coli folylpoly-γ-glutamate synthase FolC

P. Uetz, M. Babu, M. Saier, 2018, The Journal of Biological Chemistry.

The Two-Hybrid System

Peter Uetz, Carolina Vollert, Carolina S. Vollert, 2003 .

The interactome of human EGF/ErbB receptors

P. Uetz, I. Stagljar, 2006 .

From ORFeomes to protein interaction maps in viruses.

P. Uetz, Yu-An Dong, S. Rajagopala, 2004, Genome Research.

Computergestützte Auswertung von Protein-Interaktions-Screens

Peter Uetz, Nicole V. Ruiter, Rainer Stotzka, 2004, Bildverarbeitung für die Medizin.

The protein network of bacterial motility

P. Uetz, H. Mori, S. Rajagopala, 2007 .

Novel Conserved Assembly Factor of the Bacterial Flagellum

P. Uetz, S. Rajagopala, B. Titz, 2006, Journal of bacteriology.

Improving yeast two-hybrid screening systems.

P. Uetz, M. Koegl, 2008, Briefings in functional genomics & proteomics.

Local Action with Global Impact: Highly Similar Infection Patterns of Human Viruses and Bacteriophages

Peter Uetz, Stefan Wuchty, Sawsan Khuri, 2016, mSystems.

The protein network of bacterial motility

P. Uetz, H. Mori, S. Rajagopala, 2007, Molecular systems biology.

The original descriptions of reptiles and their subspecies.

P. Uetz, Alexandrea Stylianou, 2018, Zootaxa.

Functional elucidation of antibacterial phage ORFans targeting Pseudomonas aeruginosa

A. Aertsen, P. Uetz, R. Lavigne, 2014, Cellular microbiology.

Corrigendum: Protein interaction data curation: the International Molecular Exchange (IMEx) consortium

Shelby L. Bidwell, M. Tyers, P. Uetz, 2012, Nature Methods.