I. Saeed

发表

Exploratory analysis of high-throughput metabolomic data

Ute Roessner, Saman K. Halgamuge, Zhaoping Li, 2013, Metabolomics.

The oligonucleotide frequency derived error gradient and its application to the binning of metagenome fragments

I. Saeed, S. Halgamuge, 2009, BMC Genomics.

Unsupervised discovery of microbial population structure within metagenomes using nucleotide base composition

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2011, Nucleic acids research.

Bioinformatics Pipelines for Targeted Resequencing and Whole-Exome Sequencing of Human and Mouse Genomes: A Virtual Appliance Approach for Instant Deployment

Kenneth D. Doig, I. Saeed, S. Halgamuge, 2014, PloS one.

ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing

Saman K. Halgamuge, Suhinthan Maheswararajah, Sen-Lin Tang, 2015, Bioinform..

Accurate reconstruction of viral quasispecies spectra through improved estimation of strain richness

Sen-Lin Tang, Duleepa Jayasundara, I. Saeed, 2015, BMC Bioinformatics.

A new peak detection algorithm for MALDI mass spectrometry data based on a modified Asymmetric Pseudo-Voigt model

Chalini D. Wijetunge, I. Saeed, U. Roessner, 2015, BMC Genomics.

Assessing Species Diversity Using Metavirome Data: Methods and Challenges

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2017, Computational and structural biotechnology journal.

Comprehensive Insights Into Composition, Metabolic Potentials, and Interactions Among Archaeal, Bacterial, and Viral Assemblages in Meromictic Lake Shunet in Siberia

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2018, Front. Microbiol..

Microbial and viral metagenomes of a subtropical freshwater reservoir subject to climatic disturbances

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2013, The ISME Journal.

Nucleotide Composition Analysis: Use in Metagenome Analysis

I. Saeed, 2013 .

Accurate reconstruction of viral quasispecies spectra through improved estimation of strain richness

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2015, BMC Bioinformatics.

Prokaryotic assemblages and metagenomes in pelagic zones of the South China Sea

I. Saeed, S. Halgamuge, Sen-Lin Tang, 2015, BMC Genomics.

Prokaryotic assemblages and metagenomes in pelagic zones of the South China Sea

Saman Halgamuge, Sen-Lin Tang, Ting-Chang Hsu, 2015, BMC Genomics.

ENVirT: inference of ecological characteristics of viruses from metagenomic data

Damith A. Senanayake, I. Saeed, S. Halgamuge, 2019, BMC Bioinformatics.

EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data

Ute Roessner, Saman K. Halgamuge, Antony Bacic, 2015, Bioinform..

A new peak detection algorithm for MALDI mass spectrometry data based on a modified Asymmetric Pseudo-Voigt model

Chalini D. Wijetunge, I. Saeed, U. Roessner, 2015, BMC Genomics.

Dynamic Self-Organising Maps: Theory, Methods and Applications

Saman K. Halgamuge, Arthur L. Hsu, Isaam Saeed, 2009, Foundations of Computational Intelligence.

Unsupervised learning for exploring MALDI imaging mass spectrometry ‘omics’ data

Ute Roessner, Saman K. Halgamuge, Chalini D. Wijetunge, 2014, 7th International Conference on Information and Automation for Sustainability.