J. Hoch

发表

Application of nonlinear sampling schemes to COSY-type spectra

P. Schmieder, A. Stern, Gerhard Wagner, 1993, Journal of biomolecular NMR.

Maximum Entropy and the Nearly Black Object

I. Johnstone, D. Donoho, A. Stern, 1992 .

De novo backbone and sequence design of an idealized α/β-barrel protein: evidence of stable tertiary structure

S. L. Mayo, A. Stern, J. Hoch, 2003 .

Accelerated acquisition of high resolution triple-resonance spectra using non-uniform sampling and maximum entropy reconstruction.

A. Stern, J. Hoch, G. Wagner, 2004, Journal of magnetic resonance.

Improved resolution in triple-resonance spectra by nonlinear sampling in the constant-time domain

P. Schmieder, A. Stern, Gerhard Wagner, 1994, Journal of biomolecular NMR.

Nonuniform sampling and spectral aliasing.

J. Hoch, M. Maciejewski, Harry Z. Qui, 2009, Journal of magnetic resonance.

Maximum entropy signal processing of two-dimensional NMR data

J. Hoch, 1985 .

Modern spectrum analysis in multidimensional NMR spectroscopy: comparison of linear-prediction extrapolation and maximum-entropy reconstruction.

A. Stern, J. Hoch, K. Li, 2002, Journal of the American Chemical Society.

The influence of the probability density function on spectral quality in nonuniformly sampled multidimensional NMR.

D. L. Craft, J. Hoch, D. Rovnyak, 2019, Journal of magnetic resonance.

Maximum entropy reconstruction of complex (phase-sensitive) spectra

I. Johnstone, D. Donoho, A. Stern, 1990 .

Resolution and sensitivity of high field nuclear magnetic resonance spectroscopy

A. Stern, J. Hoch, G. Wagner, 2004, Journal of biomolecular NMR.

Automatic maximum entropy spectral reconstruction in NMR

J. Hoch, M. Gryk, M. Maciejewski, 2007, Journal of biomolecular NMR.

Knowledge-based nonuniform sampling in multidimensional NMR

J. Hoch, A. Schuyler, H. Arthanari, 2011, Journal of biomolecular NMR.

Sparse sampling methods in multidimensional NMR.

A. Stern, J. Hoch, A. Schuyler, 2012, Physical chemistry chemical physics : PCCP.

Sensitivity of nonuniform sampling NMR.

J. Hoch, D. Rovnyak, T. Polenova, 2015, The journal of physical chemistry. B.

Solution structure of LSIII, a long neurotoxin from the venom of Laticauda semifasciata.

A. Stern, J. Hoch, P. Connolly, 1996, Biochemistry.

Quantification of maximum-entropy spectrum reconstructions.

A. Stern, J. Hoch, G. Wagner, 1997, Journal of magnetic resonance.

Maximum Entropy Spectral Reconstruction of Non-Uniformly Sampled Data.

J. Hoch, M. Mobli, 2008, Concepts in magnetic resonance. Part A, Bridging education and research.

Enhanced sensitivity by nonuniform sampling enables multidimensional MAS NMR spectroscopy of protein assemblies.

J. Hoch, D. Rovnyak, Shangjin Sun, 2012, The journal of physical chemistry. B.

A new approach to compressed sensing for NMR

A. Stern, J. Hoch, 2015, Magnetic resonance in chemistry : MRC.

Does the maximum entropy method improve sensitivity?

A S Stern, J C Hoch, I. Johnstone, 1990, Proceedings of the National Academy of Sciences of the United States of America.

Modern spectrum analysis in nuclear magnetic resonance: alternatives to the Fourier transform.

J C Hoch, J. Hoch, 1989, Methods in enzymology.

A non-uniformly sampled 4D HCC(CO)NH-TOCSY experiment processed using maximum entropy for rapid protein sidechain assignment.

Wolfgang Bermel, Mehdi Mobli, Jeffrey C Hoch, 2010, Journal of magnetic resonance.

Fast Assignment of 15N-HSQC Peaks using High-Resolution 3D HNcocaNH Experiments with Non-Uniform Sampling

Jeffrey C. Hoch, Gerhard Wagner, Dominique P. Frueh, 2005, Journal of biomolecular NMR.

Beyond Fourier.

J. Hoch, 2017, Journal of magnetic resonance.

An irregular sampler

J. Hoch, 2017 .

Data sampling in multidimensional NMR: fundamentals and strategies.

Mark W. Maciejewski, Adam D. Schuyler, Alan S. Stern, 2012, Topics in current chemistry.

A time-saving strategy for MAS NMR spectroscopy by combining nonuniform sampling and paramagnetic relaxation assisted condensed data collection.

J. Hoch, Shangjin Sun, John C Williams, 2012, The journal of physical chemistry. B.

Characterization and nucleotide binding properties of a mutant dihydropteridine reductase containing an aspartate 37-isoleucine replacement.

J. Hoch, N. Xuong, D. Matthews, 1992, The Journal of biological chemistry.

Interpretation of ring-current shifts in proteins: application to phage λ repressor

J. Hoch, M. Weiss, 1987 .

A structural study of the hydrophobic box region of lysozyme in solution using nuclear Overhauser effects.

J. Hoch, C. Dobson, F. Poulsen, 1980, Biochemistry.

Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.

Genji Kurisu, Jens Meiler, Sameer Velankar, 2019, Structure.

NUScon: A community-driven platform for quantitative evaluation of nonuniform sampling in NMR

Adam D. Schuyler, Jeffrey C. Hoch, Robert Powers, 2021, Magnetic Resonance.

Incoherence of Partial-Component Sampling in multidimensional NMR

D. Donoho, J. Hoch, A. Schuyler, 2017, 1702.01830.

A new, storage-efficient algorithm for maximum-entropy spectrum reconstruction

A. Stern, J. Hoch, 1992 .

Nonuniform Sampling in Multidimensional NMR

A. Stern, J. Hoch, A. Schuyler, 2012 .

MIADE metadata guidelines: Minimum Information About a Disorder Experiment

Silvio C. E. Tosatto, Norman E. Davey, J. Hoch, 2022, bioRxiv.

Maximum Entropy: Multidimensional Methods

J. Hoch, M. Mobli, 2009 .

NMR and Metabolomics—A Roadmap for the Future

Leo L. Cheng, D. Wishart, J. Hoch, 2022, Metabolites.

Sensitivity gains, linearity, and spectral reproducibility in nonuniformly sampled multidimensional MAS NMR spectra of high dynamic range

J. Hoch, D. Rovnyak, Shangjin Sun, 2014, Journal of biomolecular NMR.

Nonuniform sampling and non-Fourier signal processing methods in multidimensional NMR.

Mehdi Mobli, Jeffrey C Hoch, J. Hoch, 2014, Progress in nuclear magnetic resonance spectroscopy.

Nonuniform sampling in multidimensional NMR for improving spectral sensitivity.

J. Hoch, F. Delaglio, A. Schuyler, 2018, Methods.

Three-dimensional 13C-detected CH3-TOCSY using selectively protonated proteins: facile methyl resonance assignment and protein structure determination.

J. Hoch, J. B. Jordan, C. Anklin, 2006, Journal of the American Chemical Society.

Investigation of the structure of the reaction center in photosynthetic systems by optical detection of triplet state magnetic resonance

J. Hoch, H. Frank, R. Clarke, 1977 .

Quantitative measurement using pure-phase two-dimensional exchange spectroscopy

J. Hoch, C. Dobson, E. Olejniczak, 1985 .

Biological Magnetic Resonance Data Bank

Jonathan R. Wedell, J. Hoch, Kumaran Baskaran, 2022, Nucleic Acids Res..

Enhanced validation of small-molecule ligands and carbohydrates in the protein databank.

Kiyoko F. Aoki-Kinoshita, J. Hoch, J. Westbrook, 2021, Structure.

Computational Aspects of the Study of Biological Macromolecules by Nuclear Magnetic Resonance Spectroscopy

Jeffrey C. Hoch, Flemming M. Poulsen, J. Hoch, 1991, NATO ASI Series.

CONNJUR R: an annotation strategy for fostering reproducibility in bio-NMR—protein spectral assignment

J. Hoch, E. Ulrich, M. Gryk, 2015, Journal of Biomolecular NMR.

CONNJUR R: an annotation strategy for fostering reproducibility in bio-NMR—protein spectral assignment

Jeffrey C. Hoch, Michael R. Gryk, Eldon Ulrich, 2015, Journal of Biomolecular NMR.

Multiple-quantum magic-angle spinning spectroscopy using nonlinear sampling.

Robert G Griffin, Gerhard Wagner, David Rovnyak, 2003, Journal of magnetic resonance.

Protein Data Bank: the single global archive for 3D macromolecular structure data

Cole H. Christie, Jose M. Duarte, Rachel Kramer Green, 2018, Nucleic acids research.

Cloning and localization of the lepidopteran protoxin gene of Bacillus thuringiensis subsp. kurstaki.

J. Hoch, G. Held, E. Ferrari, 1982, Proceedings of the National Academy of Sciences of the United States of America.

Vicinal coupling constants and protein dynamics.

M. Karplus, J. Hoch, C. Dobson, 1985, Biochemistry.

The Protein Data Bank Archive.

J. Hoch, S. Burley, S. Velankar, 2021, Methods in molecular biology.

Crystal structure of the CoV-Y domain of SARS-CoV-2 nonstructural protein 3

J. Hoch, H. Schwalbe, Yunfeng Li, 2023, Scientific Reports.

ModelCIF: An extension of PDBx/mmCIF data representation for computed structure models

Ben M. Webb, C. Orengo, Augustin Zídek, 2022, bioRxiv.

Comprehensive Fragment Screening of the SARS‐CoV‐2 Proteome Explores Novel Chemical Space for Drug Development

D. Laurents, J. Hoch, K. Saxena, 2022, Angewandte Chemie.

An Amateur Looks at Error Analysis in the Determination of Protein Structure by NMR

Jeffrey C. Hoch, J. Hoch, 1991 .

A method for determining overall protein fold from NMR distance restraints

Alan S. Stern, Jeffrey C. Hoch, A. Stern, 1992 .

The fatty acid synthase (FAS) gene and its promoter in Rattus norvegicus.

J. Hoch, M. Schweizer, H. Klein, 1992, DNA sequence : the journal of DNA sequencing and mapping.

NMRbox: A Resource for Biomolecular NMR Computation.

Miron Livny, Frank Delaglio, Mark W. Maciejewski, 2017, Biophysical journal.

Solution structure of human prolactin.

Kaare Teilum, Vincent Goffin, Birthe B Kragelund, 2005, Journal of molecular biology.

Molecular dynamics of the long neurotoxin LSIII.

Jeffrey C Hoch, Alan S Stern, A. Stern, 2003, Biochemistry.

Comment on "Magnetic Resonance Spectroscopy Identifies Neural Progenitor Cells in the Live Human Brain"

Mirjana Maletic-Savatic, Helene Benveniste, Petar M Djuric, 2008, Science.

Role of aspartate-37 in determining cofactor specificity and binding in rat liver dihydropteridine reductase.

J. Hoch, N. Xuong, D. Matthews, 1991, Archives of biochemistry and biophysics.

Identification of inhibitors of Plasmodium falciparum phosphoethanolamine methyltransferase using an enzyme-coupled transmethylation assay

J. Hoch, B. Hao, D. Voelker, 2010, BMC Biochemistry.

Supplementary material to "Anomalous Amide Proton Chemical Shifts as Signatures of Hydrogen Bonding to Aromatic Sidechains"

Jonathan R. Wedell, J. Hoch, A. Gronenborn, 2021, Magnetic Resonance.

NMR data processing using iterative thresholding and minimum l(1)-norm reconstruction.

David L Donoho, Jeffrey C Hoch, Alan S Stern, 2007, Journal of magnetic resonance.

Concomitant disorder and high‐affinity zinc binding in the human zinc‐ and iron‐regulated transport protein 4 intracellular loop

J. Hoch, R. Dempski, M. Maciejewski, 2019, Protein science : a publication of the Protein Society.

Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).

Masashi Yokochi, Genji Kurisu, Zukang Feng, 2019, Acta crystallographica. Section D, Structural biology.

Phosphoethanolamine methyltransferases in phosphocholine biosynthesis: functions and potential for antiparasite therapy.

Choukri Ben Mamoun, J. Hoch, B. Hao, 2011, FEMS microbiology reviews.

Phosphoethanolaminemethyltransferases in phosphocholine biosynthesis : functions and potential forantiparasite therapy April

J. Hoch, B. Hao, Y. Augagneur, 2011 .

Conformations and conformational dynamics of proteins in solution studied by nuclear magnetic double resonance.

J. Hoch, C. Dobson, E. Olejniczak, 1980, Biophysical Journal.

Spectral reconstruction methods in fast NMR: reduced dimensionality, random sampling and maximum entropy.

Mehdi Mobli, Jeffrey C Hoch, Alan S Stern, 2006, Journal of magnetic resonance.

Sensitivity gains, linearity, and spectral reproducibility in nonuniformly sampled multidimensional MAS NMR spectra of high dynamic range

J. Hoch, D. Rovnyak, Shangjin Sun, 2014, Journal of biomolecular NMR.

Maximum entropy reconstruction

A. Stern, J. Hoch, M. Mobli, 2011 .

Distributed parallel processing for multidimensional maximum entropy reconstruction.

K B Li, A S Stern, J C Hoch, 1998, Journal of magnetic resonance.

NMR Data Processing

Alan S. Stern, Jeffrey C. Hoch, A. Stern, 1996 .

Formalism for hypercomplex multidimensional NMR employing partial-component subsampling.

Mark W Maciejewski, Jeffrey C Hoch, Adam D Schuyler, 2013, Journal of magnetic resonance.

Nonuniform Sampling in Biomolecular NMR

Mark W. Maciejewski, Alan S. Stern, Jeffrey C. Hoch, 2008 .

Local knowledge helps determine protein structures

J. Hoch, M. Gryk, 2008, Proceedings of the National Academy of Sciences.

Large-Scale Recombinant Production of the SARS-CoV-2 Proteome for High-Throughput and Structural Biology Applications

Rachel W. Martin, D. Laurents, J. Hoch, 2021, Frontiers in Molecular Biosciences.

Practical Nonuniform Sampling and Non-Fourier Spectral Reconstruction for Multidimensional NMR.

Mark W Maciejewski, Jeffrey C Hoch, Adam D Schuyler, 2018, Methods in molecular biology.

Nonuniform sampling and maximum entropy reconstruction in multidimensional NMR.

Mark W Maciejewski, Mehdi Mobli, Jeffrey C Hoch, 2014, Accounts of chemical research.

Fast acquisition methods in multidimensional NMR

Jeffrey C. Hoch, Mehdi Mobli, Glenn F. King, 2011 .

Randomization improves sparse sampling in multidimensional NMR.

Mark W Maciejewski, Jeffrey C Hoch, Blagoje Filipovic, 2008, Journal of magnetic resonance.

Fluctuations and averaging of proton chemical shifts in the bovine pancreatic trypsin inhibitor.

M. Karplus, J. Hoch, C. Dobson, 1982, Biochemistry.

Robust and transferable quantification of NMR spectral quality using IROC analysis.

Mark W Maciejewski, Jeffrey C Hoch, Adam D Schuyler, 2017, Journal of magnetic resonance.

Maximum entropy reconstruction, spectrum analysis and deconvolution in multidimensional nuclear magnetic resonance.

A S Stern, J C Hoch, A. Stern, 2001, Methods in enzymology.

Solution Conformation of a Model 4-Helix Bundle Protein,

J. Hoch, T. Handel, P. Connolly, 1992 .

NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments

Miron Livny, John L Markley, Eldon L Ulrich, 2018, Journal of Biomolecular NMR.

BioMagResBank (BMRB) as a Resource for Structural Biology.

Masashi Yokochi, Naohiro Kobayashi, Toshimichi Fujiwara, 2020, Methods in molecular biology.

Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions

Silvio C. E. Tosatto, Norman E. Davey, J. Hoch, 2023, Nature Methods.

Non-Uniform Sampling for All: More NMR Spectral Quality, Less Measurement Time.

Robert G. Brinson, Luke W. Arbogast, G. S. Walker, 2017, American pharmaceutical review.

Fast NMR data acquisition

J. Hoch, M. Mobli, 2017 .

Computer-aided analysis of protein NMR spectra: Current Opinion in Structural Biology 1991, 1:1036–1041

Alan S. Stern, Jeffrey C. Hoch, A. Stern, 1991 .

Structure of the Sec14 domain of Kalirin reveals a distinct class of lipid-binding module in RhoGEFs

J. Hoch, R. Mains, B. Eipper, 2023, Nature Communications.

An automated tool for maximum entropy reconstruction of biomolecular NMR spectra

Mark W Maciejewski, Michael R Gryk, Mehdi Mobli, 2007, Nature Methods.

Photochemical degradation of tryptophan residues during CIDNP experiments

Jeffrey C. Hoch, Peter J. Connolly, J. Hoch, 1991 .

Metabolism and disposition of ferbam in the rat.

T. R. Castles, J. Hoch, C. C. Lee, 1975, Toxicology and applied pharmacology.

Merging NMR Data and Computation Facilitates Data-Centered Research

Jonathan R. Wedell, D. L. Craft, J. Hoch, 2022, Frontiers in Molecular Biosciences.

Symmetry recognition applied to two-dimensional NMR data

J. Hoch, F. Poulsen, M. Kjær, 1987 .

Non-uniformly sampled double-TROSY hNcaNH experiments for NMR sequential assignments of large proteins.

Gerhard Wagner, Dominique P Frueh, Jeffrey C Hoch, 2006, Journal of the American Chemical Society.

Nonuniform sampling of hypercomplex multidimensional NMR experiments: Dimensionality, quadrature phase and randomization.

Mark W Maciejewski, Jeffrey C Hoch, Adam D Schuyler, 2015, Journal of magnetic resonance.

Characterization of the structural properties of .alpha.1B, a peptide designed to form a four-helix bundle

J. Hoch, W. DeGrado, T. Handel, 1992 .

Optimization of 13C direct detection NMR methods

Alan S. Stern, Jeffrey C. Hoch, Volker Dötsch, 2004, Journal of biomolecular NMR.

If machines can learn, who needs scientists?

Jeffrey C Hoch, J. Hoch, 2019, Journal of magnetic resonance.

De novo backbone and sequence design of an idealized alpha/beta-barrel protein: evidence of stable tertiary structure.

S. L. Mayo, J. Hoch, F. Offredi, 2003, Journal of molecular biology.

Biochemical and Genetic Analysis of the Phosphoethanolamine Methyltransferase of the Human Malaria Parasite Plasmodium falciparum*

J. Hoch, W. Witola, K. El Bissati, 2008, Journal of Biological Chemistry.

1H, 13C, and 15N chemical shift assignments for PfPMT, a phosphoethanolamine methyltransferase from Plasmodium falciparum

J. Hoch, B. Hao, H. Arthanari, 2013, Biomolecular NMR assignments.

High-resolution aliphatic side-chain assignments in 3D HCcoNH experiments with joint H–C evolution and non-uniform sampling

J. Hoch, S. Hyberts, G. Wagner, 2005, Journal of biomolecular NMR.

Fitting Protein Structures to Experimental Data

J. Hoch, P. Connolly, A. S. Stern, 1998 .

Sensitivity gains, linearity, and spectral reproducibility in nonuniformly sampled multidimensional MAS NMR spectra of high dynamic range

J. Hoch, D. Rovnyak, Shangjin Sun, 2014, Journal of Biomolecular NMR.

Sparse sampling methods in multidimensional NMR.

J. Hoch, A. Schuyler, M. Maciejewski, 2012, Physical chemistry chemical physics : PCCP.

Elimination of 13Calpha splitting in protein NMR spectra by deconvolution with maximum entropy reconstruction.

Volker Dötsch, Jeffrey C Hoch, Alan S Stern, 2003, Journal of the American Chemical Society.

Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).

J. Hoch, H. Berman, J. Westbrook, 2019, Acta crystallographica. Section D, Structural biology.

Chemical shifts of aromatic protons in protein NMR spectra

Jeffrey C. Hoch, Christopher M. Dobson, J. Hoch, 1983 .

The indelible mark of computation on bio-NMR

J. Hoch, M. Billeter, 2014, Journal of biomolecular NMR.

N-terminal Dbl domain of the RhoGEF, Kalirin

J. Hoch, M. Schiller, Marek Barwinski, 2012, Journal of Biomolecular NMR.

NMR structure note: N-terminal Dbl domain of the RhoGEF, Kalirin

J. Hoch, M. Schiller, Marek Barwinski, 2012 .