A. Nesvizhskii
发表
Chih-Chiang Tsou,
D. Avtonomov,
Brett G Larsen,
2015,
Nature Methods.
Patrick G. A. Pedrioli,
Henry H. N. Lam,
G. Nolan,
2010,
Science Signaling.
Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data
Hyungwon Choi,
A. Gingras,
A. Nesvizhskii,
2010,
Molecular systems biology.
A. Nesvizhskii,
E. Kolker,
D. Goodlett,
2002,
Omics : a journal of integrative biology.
R. Aebersold,
A. Nesvizhskii,
E. Kolker,
2003,
Analytical chemistry.
A. Nesvizhskii,
2010,
Journal of proteomics.
R. Aebersold,
A. Nesvizhskii,
W. Gruissem,
2006,
Molecular & Cellular Proteomics.
Peter B. McGarvey,
Ying Wang,
Li Ding,
2020,
Cell.
Zhaohui S. Qin,
Z. Qin,
M. Tyers,
2010,
Science.
A. Chinnaiyan,
A. Nesvizhskii,
G. Omenn,
2010,
PloS one.
Hyungwon Choi,
Alexey I Nesvizhskii,
Damian Fermin,
2008,
Molecular & Cellular Proteomics.
Brian Raught,
Anne-Claude Gingras,
Ruedi Aebersold,
2009,
Molecular & Cellular Proteomics.
R. Aebersold,
A. Nesvizhskii,
2006
.
R. Aebersold,
A. Nesvizhskii,
2004,
Drug discovery today.
A. Nesvizhskii,
H. Paulson,
Erpan Ahat,
2021
.
A. Nesvizhskii,
A. Yocum,
A. K. Shanmugam,
2014,
Journal of proteome research.
A. Nesvizhskii,
Ho-Joon Lee,
C. Lyssiotis,
2021,
bioRxiv.
Natalie I. Tasman,
David D. Shteynberg,
Henry H. N. Lam,
2011,
Molecular & Cellular Proteomics.
Hyungwon Choi,
A. Nesvizhskii,
2008,
Journal of Proteome Research.
Hyungwon Choi,
A. Nesvizhskii,
E. Marcotte,
2011,
Journal of proteome research.
B. Searle,
A. Nesvizhskii,
M. Turner,
2008,
Journal of proteome research.
Nichole L. King,
R. Aebersold,
A. Nesvizhskii,
2010,
Proteome Bioinformatics.
Hyungwon Choi,
A. Nesvizhskii,
2008,
Journal of proteome research.
A. Nesvizhskii,
D. Fermin,
K. Ning,
2012,
Journal of proteome research.
Hyungwon Choi,
A. Nesvizhskii,
Timo Glatter,
2012,
Journal of proteome research.
Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry
Nichole L. King,
Kathleen A. Kennedy,
E. Hafen,
2004,
Genome Biology.
D. Ghosh,
Hyungwon Choi,
A. Nesvizhskii,
2008,
Journal of proteome research.
A. Nesvizhskii,
D. Fermin,
K. Ning,
2010,
Proteomics.
R. Aebersold,
A. Nesvizhskii,
P. Andrews,
2008,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
Xia Cao,
2008,
Journal of proteome research.
R. Aebersold,
A. Nesvizhskii,
J. Eng,
2003,
Molecular & Cellular Proteomics.
S. Dhanasekaran,
A. Chinnaiyan,
A. Nesvizhskii,
2019,
Cell.
Nichole L. King,
R. Aebersold,
A. Nesvizhskii,
2005,
Proteomics.
Natalie I. Tasman,
David D. Shteynberg,
Daniel B. Martin,
2010,
Proteomics.
A. Nesvizhskii,
G. Omenn,
E. Deutsch,
2015,
Journal of proteome research.
S. Varambally,
A. Chinnaiyan,
A. Nesvizhskii,
2009,
PloS one.
Daniel A. Polasky,
D. Avtonomov,
A. Nesvizhskii,
2018,
Analytical chemistry.
Ruedi Aebersold,
Alexey I. Nesvizhskii,
David R. Goodlett,
2003,
Molecular & Cellular Proteomics.
Johannes Griss,
Alexey I Nesvizhskii,
David L Tabb,
2016,
Analytical chemistry.
E. Yoon,
A. Nesvizhskii,
Z. Nikolovska-Coleska,
2018,
Nature Communications.
Hyungwon Choi,
Alexey I Nesvizhskii,
Anne-Claude Gingras,
2011,
Proteomics.
Hye Kyong Kweon,
A. Nesvizhskii,
P. Andrews,
2015,
PLoS genetics.
R. Kuick,
A. Nesvizhskii,
J. Rual,
2020,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
Yih-Leong Chang,
Yu‐Ju Chen,
2015,
Bio-protocol.
Jeffrey R. Whiteaker,
Dana R. Valley,
Karna L. Robinson,
2020,
Cell.
Hyungwon Choi,
Alexey I Nesvizhskii,
Brian Raught,
2017,
Nature Methods.
Alexey I Nesvizhskii,
Stephen E Stein,
Yuxue Liang,
2013,
Journal of proteome research.
Eric L. Weiss,
A. Nesvizhskii,
E. Weiss,
2019,
Proceedings of the National Academy of Sciences.
A. Nesvizhskii,
E. L. Ivchenko,
S. Jorda,
1994
.
A. Nesvizhskii,
A. Kavokin,
E. Ivchenko,
1996
.
Simon C Watkins,
A. Nesvizhskii,
G. Almouzni,
2020,
Nature Structural & Molecular Biology.
Guo Ci Teo,
Matthew A. Wyczalkowski,
Andy T. Kong,
2019,
Cell.
Constitutive release of CPS1 in bile and its role as a protective cytokine during acute liver injury
Michelle A. Anderson,
Graham F. Brady,
A. Nesvizhskii,
2019,
Proceedings of the National Academy of Sciences.
Christoph Steinbeck,
Yasset Perez-Riverol,
Juan Antonio Vizcaíno,
2016,
bioRxiv.
Hyungwon Choi,
Alexey I Nesvizhskii,
Ying Ding,
2008,
Journal of proteome research.
S. Dhanasekaran,
A. Chinnaiyan,
A. Nesvizhskii,
2015,
Genome research.
Hyungwon Choi,
A. Nesvizhskii,
Tiago J. P. Sobreira,
2011,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
Felipe da Veiga Leprevost,
E. Lawlor,
2018,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
K. Elenitoba-Johnson,
M. Lim,
2014,
The American journal of pathology.
M. Tyers,
Chih-Chiang Tsou,
Brett G Larsen,
2016,
Journal of proteomics.
A. Nesvizhskii,
A. Jakubowiak,
P. Richardson,
2015,
British journal of haematology.
Andy T. Kong,
Sarah E. Haynes,
D. Avtonomov,
2020,
Journal of proteome research.
Kiyoko F. Aoki-Kinoshita,
Nichollas E. Scott,
Daniel A. Polasky,
2022,
Nature Reviews Methods Primers.
Michael A. Kochen,
Jay D. Holman,
A. Nesvizhskii,
2015
.
A. Nesvizhskii,
T. Gardner,
Felipe da Veiga Leprevost,
2021,
Clinical proteomics.
Chih-Chiang Tsou,
A. Nesvizhskii,
G. Omenn,
2017,
Proceedings of the National Academy of Sciences.
Lap Man Lee,
A. Nesvizhskii,
J. Gestwicki,
2018,
JCI insight.
Jianjun Yu,
Alexey I Nesvizhskii,
Debashis Ghosh,
2008,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
Danxin Wang,
Hui Jiang,
2018
.
S. Dhanasekaran,
A. Chinnaiyan,
A. Nesvizhskii,
2015,
Nature Medicine.
Sarah E. Haynes,
A. Nesvizhskii,
D. Sept,
2020,
Current Biology.
A. Chinnaiyan,
A. Nesvizhskii,
C. Homer,
2012,
The Journal of Biological Chemistry.
Alexey I Nesvizhskii,
Dattatreya Mellacheruvu,
Andy T. Kong,
2017,
Nature Methods.
Guo Ci Teo,
Jens Decker,
A. Nesvizhskii,
2022,
Nature Communications.
John A. Robinson,
A. Nesvizhskii,
E. Carreira,
2020,
Nature Communications.
Alexey I Nesvizhskii,
Michael Y. Galperin,
Andrew Keller,
2003,
Journal of bacteriology.
Lennart Martens,
Stefano Toppo,
Geoffrey C. Fox,
2013,
Big Data.
Alexey I Nesvizhskii,
Ann Kuo,
G. Crabtree,
2009,
Proceedings of the National Academy of Sciences.
Daniel A. Polasky,
Daniel J. Geiszler,
A. Nesvizhskii,
2021,
Analytical chemistry.
A. Nesvizhskii,
R. Kennedy,
V. Basrur,
2021,
The Journal of biological chemistry.
A. Nesvizhskii,
R. Kennedy,
V. Basrur,
2021,
bioRxiv.
A. Gingras,
A. Nesvizhskii,
2012,
Proteomics.
A. Nesvizhskii,
A. Gordon,
F. Karpe,
2022,
medRxiv.
A. Nesvizhskii,
F. Leprevost,
E. Lawlor,
2018
.
Felipe da Veiga Leprevost,
A. Nesvizhskii,
D. Ginsburg,
2022,
bioRxiv.
Guo Ci Teo,
O. Schueler‐Furman,
A. Nesvizhskii,
2022,
Nature Biotechnology.
Graham F. Brady,
A. Nesvizhskii,
M. Omary,
2020,
FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
Sara R. Savage,
G. Getz,
S. Carr,
2020,
Cell.
A. Nesvizhskii,
Hui-Yin Chang,
T. Guo,
2022,
Journal of proteome research.
Guo Ci Teo,
A. Nesvizhskii,
M. Ralser,
2022,
bioRxiv.
Guo Ci Teo,
Andy T. Kong,
A. Nesvizhskii,
2022,
bioRxiv.
Simon C Watkins,
A. Nesvizhskii,
M. Modesti,
2022,
Molecular cell.
P. A. Harris,
A. Nesvizhskii,
J. Bertin,
2019,
Molecular cell.
Jian Zhang,
A. Nesvizhskii,
H. Paulson,
2022,
The Journal of biological chemistry.
Daniel A. Polasky,
Felipe da Veiga Leprevost,
A. Nesvizhskii,
2022,
bioRxiv.
A. Nesvizhskii,
E. L. Ivchenko,
S. Jorda,
1994
.
Sarah E. Haynes,
A. Nesvizhskii,
D. Sept,
2022,
Current Biology.
Daniel A. Polasky,
Daniel J. Geiszler,
A. Nesvizhskii,
2022,
bioRxiv.
Ronald J. Moore,
A. Nesvizhskii,
V. Petyuk,
2023,
Analytical chemistry.
Alexey I Nesvizhskii,
Ruedi Aebersold,
Andrew Keller,
2002,
Analytical chemistry.
R. Aebersold,
A. Nesvizhskii,
J. Ranish,
2007,
Proceedings of the National Academy of Sciences.
Hye Kyong Kweon,
A. Nesvizhskii,
P. Andrews,
2014,
PLoS genetics.
Alexey I. Nesvizhskii,
John J. Rehr,
A. Nesvizhskii,
2003
.
A. Nesvizhskii,
J. Rehr,
1999,
Journal of synchrotron radiation.
Amber L. Couzens,
Mihaela E. Sardiu,
Wade H. Dunham,
2013,
Nature Methods.
Alexey I Nesvizhskii,
A. Nesvizhskii,
2012,
Proteomics.
Hyungwon Choi,
Brett Larsen,
Mike Tyers,
2010,
Nature Methods.
E. L. Carter,
A. Nesvizhskii,
M. Omary,
2019,
Cellular and molecular gastroenterology and hepatology.
Alexey I Nesvizhskii,
Ruedi Aebersold,
R. Aebersold,
2005,
Molecular & Cellular Proteomics.
Ruedi Aebersold,
Steven Carr,
Al Burlingame,
2004,
Molecular & Cellular Proteomics.
Ruedi Aebersold,
Alexey I. Nesvizhskii,
David R. Goodlett,
2004,
The Journal of cell biology.
A. Chinnaiyan,
A. Nesvizhskii,
A. Richmond,
2012,
Gastroenterology.
Izumi V. Hinkson,
A. Nesvizhskii,
J. Eng,
2015,
Molecular endocrinology.
Joshua F. McMichael,
Sneha P. Couvillion,
Matthew A. Wyczalkowski,
2021,
Cancer cell.
Guo Ci Teo,
Allison P. Heath,
Marilyn M. Li,
2020,
Cell.
A. Nesvizhskii,
Felipe da Veiga Leprevost,
V. Basrur,
2021,
Cancers.
A. Chinnaiyan,
A. Nesvizhskii,
J. Hess,
2007,
Blood.
A. Nesvizhskii,
2014,
Nature Methods.
A. Nesvizhskii,
Anuj Kumar,
Matthew J Eckwahl,
2013,
Genetics.
Kang Ning,
Alexey I. Nesvizhskii,
A. Nesvizhskii,
2010,
BMC Bioinformatics.
A. Nesvizhskii,
Kathrin Lang,
Fengchao Yu,
2021
.
Harald Barsnes,
Johannes Griss,
Rafael C. Jimenez,
2017,
Bioinform..
Dana R. Valley,
Matthew A. Wyczalkowski,
Ratna R. Thangudu,
2021,
Cell.
Fengchao Yu,
Guo Ci Teo,
Alexey I. Nesvizhskii,
2020,
Nature Communications.
Alexey I Nesvizhskii,
Ruedi Aebersold,
Olga Vitek,
2007,
Nature Methods.
Guo Ci Teo,
Meghan C. Burke,
Jeffrey R. Whiteaker,
2020,
Cell.
Alexey I Nesvizhskii,
Damian Fermin,
Gilbert S Omenn,
2009,
Molecular & Cellular Proteomics.
Guo Ci Teo,
Matthew A. Wyczalkowski,
Ratna R. Thangudu,
2022,
Cancer cell.
Alexey I. Nesvizhskii,
Brendan A. Veeneman,
Saravana M. Dhanasekaran,
2015,
Bioinform..
Alexander R. Pico,
Matthew A. Wyczalkowski,
Sara R. Savage,
2021,
Cancer cell.
Eric W. Deutsch,
Alexey I. Nesvizhskii,
Jimmy K. Eng,
2005,
Nucleic Acids Res..
A. Chinnaiyan,
A. Nesvizhskii,
J. Hess,
2013
.
Hyungwon Choi,
Debashis Ghosh,
Alexey I. Nesvizhskii,
2013,
Bioinform..
M. MacCoss,
A. Nesvizhskii,
K. Elenitoba-Johnson,
2013,
Molecular & Cellular Proteomics.
Amanda J. Guise,
A. Nesvizhskii,
Yang Luo,
2013,
Molecular systems biology.
Guo Ci Teo,
Matthew A. Wyczalkowski,
Andy T. Kong,
2019,
Cell.
Jianping Fu,
A. Nesvizhskii,
Kenichiro Taniguchi,
2021,
Science Advances.
Alexey I Nesvizhskii,
Ruedi Aebersold,
Bernd Bodenmiller,
2009,
Journal of proteome research.
Alexey I Nesvizhskii,
Damian Fermin,
Venkatesha Basrur,
2011,
Proteomics.
Guo Ci Teo,
O. Schueler‐Furman,
A. Nesvizhskii,
2021,
bioRxiv.
Alexey I Nesvizhskii,
Daniel A Polasky,
Fengchao Yu,
2020,
Molecular & Cellular Proteomics.
Guo Ci Teo,
Fengchao Yu,
Alexey I. Nesvizhskii,
2020,
bioRxiv.
Lennart Martens,
Doron Lancet,
Dmitrij Frishman,
2014,
Omics : a journal of integrative biology.
SAINTexpress: improvements and additional features in Significance Analysis of INTeractome software.
Guomin Liu,
Hyungwon Choi,
Alexey I Nesvizhskii,
2014,
Journal of proteomics.
Guomin Liu,
Hyungwon Choi,
Alexey I Nesvizhskii,
2012,
Current protocols in bioinformatics.
Hyungwon Choi,
Alexey I Nesvizhskii,
Anne-Claude Gingras,
2013,
Molecular & Cellular Proteomics.
Roman A. Zubarev,
Emanuel Schmid,
Witold Wolski,
2017,
Nucleic Acids Res..
Daniel A. Polasky,
Daniel J. Geiszler,
A. Nesvizhskii,
2021,
bioRxiv.
Daniel A. Polasky,
Daniel J. Geiszler,
A. Nesvizhskii,
2021,
bioRxiv.
Alexey I Nesvizhskii,
Daniel A Polasky,
Fengchao Yu,
2020,
Journal of proteome research.
Guo Ci Teo,
Fengchao Yu,
Alexey I. Nesvizhskii,
2020,
Nature Methods.
A. Nesvizhskii,
Hacer Karatas,
Liu Liu,
2016,
Cell stem cell.
Chih-Chiang Tsou,
A. Nesvizhskii,
Yu‐Ju Chen,
2015,
Nature Communications.
Yasset Perez-Riverol,
Brendan MacLean,
Ruedi Aebersold,
2016,
Nature Biotechnology.
Alexey I Nesvizhskii,
Brian Raught,
Ruedi Aebersold,
2006,
Genome Biology.
Alexey I Nesvizhskii,
Ruedi Aebersold,
Mingliang Ye,
2006,
Journal of proteome research.
A. Nesvizhskii,
G. Guo,
L. Hsu,
2001
.
Hyungwon Choi,
A. Nesvizhskii,
C. Creighton,
2011,
PloS one.
Alexey I. Nesvizhskii,
Felipe da Veiga Leprevost,
Venkatesha Basrur,
2020,
Nature Communications.
A. Nesvizhskii,
Wei Chen,
V. Basrur,
2018,
Oncotarget.
A. Nesvizhskii,
V. Petyuk,
Bo Wen,
2021,
Molecular & cellular proteomics : MCP.
Alexey I. Nesvizhskii,
Damian Fermin,
Arul M. Chinnaiyan,
2013,
Nature Communications.
A. Nesvizhskii,
T. Gardner,
Felipe da Veiga Leprevost,
2021,
Journal of clinical medicine.
Henry H N Lam,
Ruedi Aebersold,
Alexey I. Nesvizhskii,
2008
.
Alexey I. Nesvizhskii,
Alexey Kavokin,
R. P. Seisyan,
1995,
Other Conferences.
A. Nesvizhskii,
G. Li,
M. B. Mumphrey,
2023,
bioRxiv.
Dana R. Valley,
Matthew A. Wyczalkowski,
Ratna R. Thangudu,
2021,
Cell.
Henry H N Lam,
Luis Mendoza,
Ruedi Aebersold,
2011
.
Alexey I. Nesvizhskii,
Sjoerd van der Post,
Gunnar C. Hansson,
2012,
Journal of proteome research.
Katerina Kechris,
Alexey I. Nesvizhskii,
Richard Reisdorph,
2013,
Genom. Proteom. Bioinform..
Hyungwon Choi,
Alexey I Nesvizhskii,
Ruedi Aebersold,
2011,
Molecular systems biology.
Alexey I. Nesvizhskii,
Dattatreya Mellacheruvu,
Felipe da Veiga Leprevost,
2017
.
Henry H N Lam,
Ruedi Aebersold,
Alexey I. Nesvizhskii,
2008
.
Alexey I Nesvizhskii,
Alexander V Ratushny,
John D Aitchison,
2010,
Molecular & Cellular Proteomics.
A. Nesvizhskii,
J. Aitchison,
M. Marelli,
2008,
Methods in molecular biology.
A. Nesvizhskii,
A. Ankudinov,
J. Rehr,
2001
.
A. Nesvizhskii,
A. Ankudinov,
J. Rehr,
2001,
Journal of synchrotron radiation.
Hyungwon Choi,
Alexey I Nesvizhskii,
Anne-Claude Gingras,
2015,
Journal of proteomics.
A. Gingras,
A. Nesvizhskii,
D. Klionsky,
2018,
Proceedings of the National Academy of Sciences.
Hyungwon Choi,
Alexey I Nesvizhskii,
Damian Fermin,
2015,
Journal of proteomics.
Michael J MacCoss,
Alexey I Nesvizhskii,
Ruedi Aebersold,
2017,
Nature Methods.
Hyungwon Choi,
Debashis Ghosh,
Alexey I. Nesvizhskii,
2009,
Bioinform..
A. Nesvizhskii,
E. Liu,
Chin-Yo Lin,
2010
.
M. Carrington,
A. Nesvizhskii,
I. Grigorova,
2023,
bioRxiv.
Guomin Liu,
Jianping Zhang,
Hyungwon Choi,
2012,
Current protocols in bioinformatics.
A. Chinnaiyan,
A. Nesvizhskii,
Yuzhuo Wang,
2021,
Nature.
Fengchao Yu,
Alexey I. Nesvizhskii,
Sarah E. Haynes,
2020,
bioRxiv.
Sarah E. Haynes,
A. Nesvizhskii,
M. Cianfrocco,
2023,
bioRxiv.
Alexey I. Nesvizhskii,
Andy T. Kong,
Sarah E. Haynes,
2020,
Nature Methods.
Alexey I Nesvizhskii,
Guo Ci Teo,
Yu-Ju Chen,
2016,
Proteomics.
Hon Wai Leong,
Kang Ning,
Sriganesh Srihari,
2010,
BMC Bioinformatics.
Guo Ci Teo,
A. Nesvizhskii,
Hui Zhang,
2020,
Analytical chemistry.
Eric L. Weiss,
A. Nesvizhskii,
Alexander V. Statsyuk,
2018,
bioRxiv.
Alexey I Nesvizhskii,
A. Nesvizhskii,
Avinash K Shanmugam,
2015,
Journal of proteome research.
Alexey I Nesvizhskii,
Ting-Yi Sung,
Wai-Kok Choong,
2015,
Journal of proteome research.
Eric W. Deutsch,
Alexey I. Nesvizhskii,
Robert L. Moritz,
2013,
Molecular & Cellular Proteomics.
Alexey I. Nesvizhskii,
Robert L. Moritz,
David Shteynberg,
2013
.
Yasset Perez-Riverol,
Alexey I Nesvizhskii,
Guo Ci Teo,
2020,
Nature Methods.
A. Gingras,
A. Nesvizhskii,
D. Klionsky,
2017,
bioRxiv.
Olga Vitek,
Alexey I. Nesvizhskii,
Kelvin Ma,
2012,
BMC Bioinformatics.
A. Nesvizhskii,
Danxin Wang,
Hui Jiang,
2018,
Journal of proteome research.
A. Nesvizhskii,
Danxin Wang,
Hui Jiang,
2018,
bioRxiv.
Tony Pawson,
Guomin Liu,
Brett Larsen,
2010,
Nature Biotechnology.
J. Kitzman,
J. Lupski,
A. Nesvizhskii,
2019,
The Journal of clinical investigation.
Guo Ci Teo,
Jens Decker,
A. Nesvizhskii,
2021,
bioRxiv.
Hyungwon Choi,
A. Nesvizhskii,
C. Epting,
2010,
Eukaryotic Cell.
R. Aebersold,
A. Nesvizhskii,
J. Eng,
2004,
Sub-cellular biochemistry.
P. R. Elliott,
A. Nesvizhskii,
Seamus J. Martin,
2018,
Cell reports.
Phil Andrews,
John R Yates,
Rolf Apweiler,
2009,
Journal of proteome research.
Reta Birhanu Kitata,
A. Nesvizhskii,
Ting-Yi Sung,
2021,
Nature Communications.
Alexey I Nesvizhskii,
A. Nesvizhskii,
2007,
Methods in molecular biology.
Alexander W. Sun,
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