V. Rybin

发表

Functional organization of the yeast proteome by systematic analysis of protein complexes

P. Bork, R. Copley, R. Krause, 2002, Nature.

Computer-aided design of a PDZ domain to recognize new target sequences

V. Rybin, L. Serrano, M. Schwab, 2002, Nature Structural Biology.

The Eps8 protein coordinates EGF receptor signalling through Rac and trafficking through Rab5

Pier Paolo Di Fiore, Giorgio Scita, Marino Zerial, 2000, Nature.

The Eps 8 protein coordinates EGF receptor signalling through Rac and traf ® cking through Rab 5

Pier Paolo Di Fiore, Giorgio Scita, Marino Zerial, 2022 .

A systematic screen for protein–lipid interactions in Saccharomyces cerevisiae

P. Bork, L. Jensen, A. Gavin, 2010, Molecular systems biology.

Proteome Organization in a Genome-Reduced Bacterium

P. Bork, Takuji Yamada, R. Aebersold, 2009, Science.

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium

Arne G. Schmeisky, P. Bork, A. Gavin, 2012, Molecular systems biology.

Large-Scale Low-Cost NGS Library Preparation Using a Robust Tn5 Purification and Tagmentation Protocol

Lars Velten, Lars M. Steinmetz, L. Steinmetz, 2017, G3: Genes, Genomes, Genetics.

Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq

T. Gibson, V. Rybin, M. Wilmanns, 2017, Scientific Reports.

68Ga-labelled recombinant antibody variants for immuno-PET imaging of solid tumours

V. Rybin, U. Haberkorn, M. Little, 2010, European Journal of Nuclear Medicine and Molecular Imaging.

CHIP participates in protein triage decisions by preferentially ubiquitinating Hsp70‐bound substrates

V. Rybin, M. Mayer, M. Stankiewicz, 2010, The FEBS journal.

Insights into the Function of the CRM1 Cofactor RanBP3 from the Structure of Its Ran-Binding Domain

V. Rybin, C. Müller, C. Petosa, 2011, PloS one.

Dimerization and Protein Binding Specificity of the U2AF Homology Motif of the Splicing Factor Puf60*

T. Gibson, V. Rybin, G. Stier, 2009, Journal of Biological Chemistry.

The current understanding of protein – lipid recognition comes from the study of a limited number of lipids , principally

P. Bork, L. Jensen, A. Gavin, 2010 .

Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation

V. Rybin, R. Bayliss, Daniel Bojar, 2014, The Plant journal : for cell and molecular biology.

Muscle RING-finger protein-1 (MuRF1) as a connector of muscle energy metabolism and protein synthesis.

V. Rybin, Keiji Tanaka, S. Witt, 2008, Journal of molecular biology.

A General Small-Angle X-ray Scattering-Based Screening Protocol Validated for Protein-RNA Interactions.

V. Rybin, D. Svergun, P. Masiewicz, 2018, ACS combinatorial science.

A Novel Rab5 GDP/GTP Exchange Factor Complexed to Rabaptin-5 Links Nucleotide Exchange to Effector Recruitment and Function

Marino Zerial, Matthias Mann, Harald Stenmark, 1997, Cell.

Endosome dynamics regulated by a Rho protein

P. Auvinen, V. Rybin, M. Zerial, 1996, Nature.

E6 proteins from diverse papillomaviruses self-associate both in vitro and in vivo.

V. Rybin, Xavier Bernard, M. Masson, 2010, Journal of molecular biology.

Mouse Profilin 2 Regulates Endocytosis and Competes with SH3 Ligand Binding to Dynamin 1*

V. Rybin, W. Witke, A. Di Nardo, 2006, Journal of Biological Chemistry.

Decoding of Methylated Histone H3 Tail by the Pygo-BCL9 Wnt Signaling Complex

V. Rybin, M. Bienz, Maxim Nekrasov, 2008, Molecular cell.

YfhJ, a molecular adaptor in iron-sulfur cluster formation or a frataxin-like protein?

V. Rybin, A. Pastore, B. Bukau, 2006, Structure.

Catalytic Core of a Membrane-Associated Eukaryotic Polyphosphate Polymerase

V. Rybin, A. Mayer, C. Herrmann, 2009, Science.

Identification of Unusual E6 and E7 Proteins within Avian Papillomaviruses: Cellular Localization, Biophysical Characterization, and Phylogenetic Analysis

V. Rybin, M. Van Ranst, R. Burk, 2009, Journal of Virology.

Structure and Function of the Hetero-oligomeric Cysteine Synthase Complex in Plants*

V. Rybin, R. Wade, K. Rippe, 2010, The Journal of Biological Chemistry.

cAMP synthesis and degradation by phagosomes regulate actin assembly and fusion events: consequences for mycobacteria

V. Rybin, M. Houslay, B. Hemmings, 2006, Journal of Cell Science.

The Xist RNA A-repeat comprises a novel AUCG tetraloop fold and a platform for multimerization.

V. Rybin, M. Sattler, A. Wutz, 2011, RNA.

Chromatin-modifying Complex Component Nurf55/p55 Associates with Histones H3 and H4 and Polycomb Repressive Complex 2 Subunit Su(z)12 through Partially Overlapping Binding Sites

V. Rybin, C. Müller, F. Baudin, 2011, The Journal of Biological Chemistry.

Mutation analysis in Costello syndrome: functional and structural characterization of the HRAS p.Lys117Arg mutation

Eric Legius, Jan Cools, Kevin Shannon, 2008, Human mutation.

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.

Bernhard Kuster, David Tollervey, Ed Hurt, 2002, Molecular cell.

The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase- and RNA-Binding Activities.

V. Rybin, C. Müller, A. Ephrussi, 2015, Cell reports.

HDAC6–p97/VCP controlled polyubiquitin chain turnover

V. Rybin, C. Müller, E. Garman, 2006, The EMBO journal.

Molecular recognition of histone lysine methylation by the Polycomb group repressor dSfmbt

Raquel Matos, Clemens Grimm, V. Rybin, 2009, The EMBO journal.

Structural and functional analyses of methyl‐lysine binding by the malignant brain tumour repeat protein Sex comb on midleg

V. Rybin, C. Müller, W. Fischle, 2007, EMBO reports.

GTPase activity of Rab5 acts as a timer for endocytic membrane fusion

Oliver Ullrich, Miguel C. Seabra, Marino Zerial, 1996, Nature.

The FACT Spt16 “peptidase” domain is a histone H3–H4 binding module

V. Rybin, T. Stuwe, K. Scheffzek, 2008, Proceedings of the National Academy of Sciences.

Structural insights into the pH-controlled targeting of plant cell-wall invertase by a specific inhibitor protein

V. Rybin, K. Scheffzek, M. Hothorn, 2010, Proceedings of the National Academy of Sciences.

Mice with a homozygous gene trap vector insertion in mgcRacGAP die during pre-implantation development

V. Rybin, M. Zerial, V. Baekelandt, 2001, Mechanisms of Development.

Structural and biochemical characterization of the yeast exosome component Rrp40

V. Rybin, M. Sattler, E. Conti, 2007, EMBO reports.

Structural Basis for a Safety-Belt Mechanism That Anchors Condensin to Chromosomes

Shveta Bisht, V. Rybin, C. Haering, 2017, Cell.

An organized co-assembly of clathrin adaptors is essential for endocytosis.

V. Rybin, J. Briggs, C. Sachse, 2015, Developmental cell.

Lipid Cooperativity as a General Membrane-Recruitment Principle for PH Domains.

Karl G. Kugler, P. Bork, J. Ellenberg, 2015, Cell reports.

Crystal structure of human filamin C domain 23 and small angle scattering model for filamin C 23-24 dimer.

V. Rybin, O. Carugo, D. Svergun, 2007, Journal of molecular biology.

Structural and Functional Characterization of a Phosphatase Domain within Yeast General Transcription Factor IIIC

A. Gavin, V. Rybin, C. Müller, 2013, The Journal of Biological Chemistry.

Structural basis of histone H2A–H2B recognition by the essential chaperone FACT

V. Rybin, E. Hurt, B. Nijmeijer, 2013, Nature.

Structure of the Kti11/Kti13 heterodimer and its double role in modifications of tRNA and eukaryotic elongation factor 2.

A. Gavin, V. Rybin, C. Müller, 2015, Structure.

A family of macrodomain proteins reverses cellular mono-ADP-ribosylation

Martin Zacharias, V. Rybin, M. Zacharias, 2013, Nature Structural &Molecular Biology.

Isoform- and cell-state-specific lipidation of ApoE in astrocytes.

A. Gavin, V. Rybin, V. Lakics, 2022, Cell reports.

Oligomeric Complexes Link Rab5 Effectors with NSF and Drive Membrane Fusion via Interactions between EEA1 and Syntaxin 13

V. Rybin, H. McBride, R. Teasdale, 1999, Cell.

Vps9, Rabex-5 and DSS4: proteins with weak but distinct nucleotide-exchange activities for Rab proteins.

V. Rybin, M. Zerial, R. Goody, 2001, Journal of molecular biology.

Phosphoinositides regulate membrane-dependent actin assembly by latex bead phagosomes.

V. Rybin, Hye-Won Shin, G. Griffiths, 2002, Molecular biology of the cell.

Two distinct effectors of the small GTPase Rab5 cooperate in endocytic membrane fusion

V. Rybin, M. Zerial, H. Stenmark, 1998, The EMBO journal.

Distinct Rab‐binding domains mediate the interaction of Rabaptin‐5 with GTP‐bound rab4 and rab5

V. Rybin, M. Zerial, H. Stenmark, 1998, The EMBO journal.

Lipids regulate P2X7-receptor-dependent actin assembly by phagosomes via ADP translocation and ATP synthesis in the phagosome lumen

V. Rybin, E. Anes, G. Griffiths, 2009, Journal of Cell Science.

Analysis of the specific interactions between the lectin domain of malectin and diglucosides.

V. Rybin, C. Muhle-Goll, K. Fehér, 2010, Glycobiology.

Multi-domain conformational selection underlies pre-mRNA splicing regulation by U2AF

Michael Sattler, Juan Valcárcel, Tobias Madl, 2011, Nature.

The redox switch of gamma-glutamylcysteine ligase via a reversible monomer-dimer transition is a mechanism unique to plants.

V. Rybin, T. Rausch, K. Scheffzek, 2008, The Plant journal : for cell and molecular biology.

Solution structure analysis of the HPV16 E6 oncoprotein reveals a self-association mechanism required for E6-mediated degradation of p53.

V. Rybin, G. Travé, K. Zanier, 2012, Structure.

Crystal structure of the protein disulfide bond isomerase, DsbC, from Escherichia coli

V. Rybin, E. Baker, A. McCarthy, 2000, Nature Structural Biology.

Regulation of oscillatory contraction in insect flight muscle by troponin.

V. Rybin, W. Linke, K. Leonard, 2010, Journal of molecular biology.

A bromodomain–DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT

V. Rybin, C. Müller, B. Simon, 2016, Nature Communications.

Functional synergy between Rab5 effector Rabaptin-5 and exchange factor Rabex-5 when physically associated in a complex.

V. Rybin, M. Zerial, R. Lippé, 2001, Molecular biology of the cell.

Staphylococcus aureus Aminopeptidase S Is a Founding Member of a New Peptidase Clan*

S. G. Odintsov, V. Rybin, G. Bourenkov, 2005, Journal of Biological Chemistry.

ATP-dependent membrane assembly of F-actin facilitates membrane fusion.

V. Rybin, Arnd Pralle, G. Griffiths, 2001, Molecular biology of the cell.

Bacterium Proteome Organization in a Genome-Reduced

P. Bork, Takuji Yamada, R. Aebersold, 2009 .