Meng-long Li

发表

Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences

Yanzhi Guo, Lezheng Yu, Z. Wen, 2008, Nucleic acids research.

Identification of RNA-binding sites in proteins by integrating various sequence information

Meng-long Li, Cuicui Wang, Yaping Fang, 2010, Amino Acids.

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Kevin C. Dorff, Aaron M. Smalter, Stephen C. Harris, 2010, Nature Biotechnology.

Effects of neighboring sequence environment in predicting cleavage sites of signal peptides

Z. Wen, Meng-long Li, F. Tan, 2008, Peptides.

Comparison of chemometric methods for brand classification of cigarettes by near-infrared spectroscopy

Meng-long Li, Chao Tan, Xin Qin, 2009 .

Study of the feasibility of distinguishing cigarettes of different brands using an Adaboost algorithm and near-infrared spectroscopy

Xin Qin, Chao Tan, Menglong Li, 2007, Analytical and bioanalytical chemistry.

Calibration transfer between two near-infrared spectrometers based on a wavelet packet transform.

Meng-long Li, Chao Tan, 2007, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

A structural dissection of protein–RNA interactions based on different RNA base areas of interfaces

Yanzhi Guo, Meng-long Li, Wenmin Hu, 2018, RSC advances.

A structural dissection of large protein-protein crystal packing contacts

Yanzhi Guo, Meng-long Li, Jiesi Luo, 2015, Scientific Reports.

Effective discrimination between biologically relevant contacts and crystal packing contacts using new determinants

Menglong Li, Yanzhi Guo, Yu Wang, 2014, Proteins.

Probing the Druggablility on the Interface of the Protein–Protein Interaction and Its Allosteric Regulation Mechanism on the Drug Screening for the CXCR4 Homodimer

Yanzhi Guo, Meng-long Li, X. Pu, 2019, Front. Pharmacol..

Exploring the mechanism of F282L mutation-caused constitutive activity of GPCR by a computational study.

Yanzhi Guo, Meng-long Li, X. Pu, 2016, Physical chemistry chemical physics : PCCP.

Structural Features and Ligand Selectivity for 10 Intermediates in the Activation Process of β2-Adrenergic Receptor

Yanzhi Guo, Meng-long Li, X. Pu, 2017, ACS omega.

Probing the cooperative mechanism of the μ-δ opioid receptor heterodimer by multiscale simulation.

Yanzhi Guo, Meng-long Li, X. Pu, 2018, Physical chemistry chemical physics : PCCP.

Use multiscale simulation to explore the effects of the homodimerizations between different conformation states on the activation and allosteric pathway for the μ-opioid receptor.

Yanzhi Guo, Meng-long Li, X. Pu, 2018, Physical chemistry chemical physics : PCCP.

Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach.

Yanzhi Guo, Lezheng Yu, Meng-long Li, 2009, Journal of theoretical biology.

A reliable multiclass classification model for identifying the subtypes of parotid neoplasms constructed with variable combination population analysis and partial least squares regression based on Raman spectra

Z. Wen, Meng-long Li, B. Yan, 2017 .

[Near infrared Raman spectral character and diagnostic value of squamous cell carcinoma of oral mucosa].

Meng-long Li, Zhi-ning Wen, Longjiang Li, 2010, Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology.

Discrimination of parotid neoplasms from the normal parotid gland by use of Raman spectroscopy and support vector machine.

Meng-long Li, Zhi-ning Wen, Yi Li, 2011, Oral oncology.

Prediction of Lipid-Binding Sites Based on Support Vector Machine and Position Specific Scoring Matrix

Yanzhi Guo, Meng-long Li, Wenjia Xiong, 2010, The protein journal.

Genetic Contexts Characterize Dynamic Histone Modification Patterns Among Cell Types

Meng-long Li, Yizhou Li, Yanmei Lin, 2019, Interdisciplinary Sciences: Computational Life Sciences.

Network characteristics of human RNA-RNA interactions and application in the discovery of breast cancer-associated RNAs

Meng-long Li, Yu Liang, Yizhou Li, 2020 .

Predicting protein lysine methylation sites by incorporating single-residue structural features into Chou's pseudo components

Yanzhi Guo, Lezheng Yu, Meng-long Li, 2018, Chemometrics and Intelligent Laboratory Systems.

Prediction of hot spots residues in protein–protein interface using network feature and microenvironment feature

Menglong Li, Qifan Kuang, Ling Ye, 2014 .

Effective Identification of Gram-Negative Bacterial Type III Secreted Effectors Using Position-Specific Residue Conservation Profiles

Menglong Li, Xuemei Pu, Yanzhi Guo, 2013, PloS one.

Mutual information-induced interval selection combined with kernel partial least squares for near-infrared spectral calibration.

Menglong Li, Chao Tan, Meng-long Li, 2008, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

Fast Fourier transform-based support vector machine for subcellular localization prediction using different substitution models.

Menglong Li, Zhimeng Wang, Meng-long Li, 2007, Acta biochimica et biophysica Sinica.

SecretP: identifying bacterial secreted proteins by fusing new features into Chou's pseudo-amino acid composition.

Menglong Li, Yanzhi Guo, Lezheng Yu, 2010, Journal of theoretical biology.

Computational identifying and characterizing circular RNAs and their associated genes in hepatocellular carcinoma

Menglong Li, Ziyan Huang, Qifan Kuang, 2017, PloS one.

SecretP: A new method for predicting mammalian secreted proteins

Menglong Li, Yanzhi Guo, Lezheng Yu, 2010, Peptides.

Research on the Raman spectral character and diagnostic value of squamous cell carcinoma of oral mucosa

Menglong Li, Yanzhi Guo, Yi Li, 2009 .

Using auto covariance method for functional discrimination of membrane proteins based on evolution information

Li Yang, Menglong Li, Jiamin Xiao, 2009, Amino Acids.

Local sequence information-based support vector machine to classify voltage-gated potassium channels.

Yanzhi Guo, Z. Wen, Meng-long Li, 2006, Acta biochimica et biophysica Sinica.

Fast fourier transform-based support vector machine for prediction of G-protein coupled receptor subfamilies.

Yanzhi Guo, Z. Wen, Meng-long Li, 2005, Acta biochimica et biophysica Sinica.

Using Position Specific Scoring Matrix and Auto Covariance to Predict Protein Subnuclear Localization

Menglong Li, Yanzhi Guo, Yanzhi Guo, 2009 .

Dissecting the regulation rules of cancer-related miRNAs based on network analysis

Yanzhi Guo, Meng-long Li, X. Pu, 2016, Scientific Reports.

Predicting putative adverse drug reaction related proteins based on network topological properties

Menglong Li, Qifan Kuang, Ling Ye, 2014 .

Optimal QSAR Analysis of the Carcinogenic Activity of Aromatic and Heteroaromatic Amines

Meng-long Li, Yaping Fang, Yi Feng, 2008 .

Investigation of the proteins folding rates and their properties of amino acid networks

Menglong Li, Zhining Wen, Daichuan Ma, 2010 .

Post‐modified non‐negative matrix factorization for deconvoluting the gene expression profiles of specific cell types from heterogeneous clinical samples based on RNA‐sequencing data

Z. Wen, Meng-long Li, Yu Liang, 2018 .

A New Network-Based Strategy for Predicting the Potential miRNA-mRNA Interactions in Tumorigenesis

Z. Wen, Meng-long Li, Yu Liang, 2017, International journal of genomics.

Solvent effects on isolated formamide and its monohydrated complex: observations from PCM study

Yanzhi Guo, Z. Wen, Meng-long Li, 2009 .

An ensemble method based on uninformative variable elimination and mutual information for spectral multivariate calibration.

Meng-long Li, Chao Tan, Xin Qin, 2010, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

Effective identification of kinase-specific phosphorylation sites based on domain–domain interactions

Yanzhi Guo, Meng-long Li, Jiesi Luo, 2014 .

Novel Feature for Catalytic Protein Residues Reflecting Interactions with Other Residues

Z. Wen, Meng-long Li, Jiamin Xiao, 2011, PloS one.

Construction and application of a novel library: Fourier transform infrared wavelet coefficients library.

Meng-long Li, F. Tan, Yizhou Li, 2008, Analytica chimica acta.

Method for Infrared Spectral Compression Based on the Embedded Zerotree Wavelet

Z. Wen, Meng-long Li, Fu-sheng Nie, 2005 .

ExoceRNA atlas: A database of cancer ceRNAs in human blood exosomes.

Yanzhi Guo, Meng-long Li, X. Pu, 2020, Life sciences.

Narrowing the Gap Between In Vitro and In Vivo Genetic Profiles by Deconvoluting Toxicogenomic Data In Silico

Z. Wen, Meng-long Li, Yuan Liu, 2020, Frontiers in Pharmacology.

Combining Network Topological Characteristics With Sequence and Structure Based Features for Predicting Protein Stability Changes Upon Single Amino Acid Mutation

Meng-long Li, Yizhou Li, L. Ye, 2014 .

Molecular mechanism of carbon nanotube to activate Subtilisin Carlsberg in polar and non-polar organic media

Yanzhi Guo, Meng-long Li, X. Pu, 2016, Scientific Reports.

Effects of organic solvents and substrate binding on trypsin in acetonitrile and hexane media

Yanzhi Guo, Meng-long Li, X. Pu, 2013, Journal of Molecular Modeling.

Prediction of kinase-specific phosphorylational interactions using random forest

Yanzhi Guo, Meng-long Li, Jiesi Luo, 2013 .

Use of network model to explore dynamic and allosteric properties of three GPCR homodimers

Yanzhi Guo, Meng-long Li, Yuan Yuan, 2016 .

Distinguishing the disease-associated SNPs based on composition frequency analysis

Yanzhi Guo, Meng-long Li, X. Pu, 2017, Interdisciplinary Sciences: Computational Life Sciences.

Predicting the state of cysteines based on sequence information.

Xia Wang, Menglong Li, Yanzhi Guo, 2010, Journal of theoretical biology.

Functional dissection of human targets for KSHV-encoded miRNAs using network analysis

Yanzhi Guo, Meng-long Li, X. Pu, 2017, Scientific Reports.

A Combination of Chemometrics and Quantum Mechanics Methods Applied to Analysis of Femtosecond Transient Absorption Spectrum of Ortho-Nitroaniline

Meng-long Li, X. Pu, Genbai Chu, 2016, Scientific Reports.

Simultaneous spectrophotometric quantification of dinitrobenzene isomers in water samples using multivariate calibration methods

Z. Wen, Meng-long Li, X. Pu, 2016 .

Computer-assisted prediction of the classification of the pesticide chemical structure in mass spectra

Meng-long Li, Gang Yang, Yuxiang Zhang, 2007 .

Transcriptome Analysis Identifies Piwi-Interacting RNAs as Prognostic Markers for Recurrence of Prostate Cancer

Z. Wen, Meng-long Li, Yu Liang, 2019, Front. Genet..

Deep convolutional neural networks for predicting leukemia-related transcription factor binding sites from DNA sequence data

Xuemei Pu, Chuan Li, Jian He, 2020, Chemometrics and Intelligent Laboratory Systems.

Genome-wide association study combined with biological context can reveal more disease-related SNPs altering microRNA target seed sites

Z. Wen, Meng-long Li, Di Wu, 2014, BMC Genomics.

A method for gene essentiality in miRNA-TF-mRNA co-regulatory network and its application on prostate cancer

Lezheng Yu, Meng-long Li, Yizhou Li, 2019, Chemometrics and Intelligent Laboratory Systems.

Comparative analysis of oncogenes identified by microarray and RNA-sequencing as biomarkers for clinical prognosis.

Z. Wen, Meng-long Li, Junmei Xu, 2015, Biomarkers in medicine.

Individually double minimum-distance definition of protein–RNA binding residues and application to structure-based prediction

Wen Hu, Liu Qin, Menglong Li, 2018, Journal of Computer-Aided Molecular Design.

In silico identification of Gram-negative bacterial secreted proteins from primary sequence

Menglong Li, Xuemei Pu, Yanzhi Guo, 2013, Comput. Biol. Medicine.

Prediction of protein–protein binding affinity using diverse protein–protein interface features

Xuemei Pu, Yanzhi Guo, Duo Ma, 2014 .

Unfolding mechanism of thrombin-binding aptamer revealed by molecular dynamics simulation and Markov State Model

Menglong Li, Xuemei Pu, Yanzhi Guo, 2016, Scientific Reports.

Effects of organic solvent and crystal water on γ-chymotrypsin in acetonitrile media: observations from molecular dynamics simulation and DFT calculation.

Yanzhi Guo, Meng-long Li, Wei Yang, 2012, The journal of physical chemistry. B.

A COMPARATIVE STUDY OF META/PARA SUBSTITUTION EFFECTS ON THE HYDROGEN-BONDED COMPLEX OF ANILINE-H2O: OBSERVATIONS FROM COMPUTATION

Yanzhi Guo, Z. Wen, Meng-long Li, 2011 .

Understanding the conformation transition in the activation pathway of β2 adrenergic receptor via a targeted molecular dynamics simulation.

Yanzhi Guo, Meng-long Li, X. Pu, 2015, Physical chemistry chemical physics : PCCP.

Attention-based GCN Integrates Multi-omics Data for Breast Cancer Subtype Classification and Patient-specific Gene Marker Identification

Meng-long Li, Yizhou Li, Xiang Lv, 2022, bioRxiv.

Studying Peptides Biological Activities Based on Multidimensional Descriptors (E) Using Support Vector Regression

Z. Wen, Meng-long Li, Zhimeng Wang, 2010, International Journal of Peptide Research and Therapeutics.

Quantitative determination on binary-component polymer bonded explosives: A joint study of ultraviolet spectrophotometry and multivariate calibration methods

Z. Wen, Meng-long Li, X. Pu, 2015 .

Comparative Analysis for the Performance of Variant Calling Pipelines on Detecting the de novo Mutations in Humans

Z. Wen, Meng-long Li, Yu Liang, 2019, Front. Pharmacol..

Domain position prediction based on sequence information by using fuzzy mean operator

Meng-long Li, Runyu Jing, Jing Sun, 2015, Proteins.

Predicting pathogenic single nucleotide variants through a comprehensive analysis on multiple level features

Meng-long Li, Yizhou Li, Yan Li, 2016 .

Studying aromatic compounds in infrared spectra based on support vector machine

Jing Zhang, Meng-long Li, Qiusheng Wang, 2007 .

Prediction of neurotoxins by support vector machine based on multiple feature vectors

Yanzhi Guo, Meng-long Li, Xia Wang, 2010, Interdisciplinary Sciences: Computational Life Sciences.

Simultaneous determination of tin, germanium and molybdenum by diode array detection-flow injection analysis with partial least squares calibration model.

Meng-long Li, Yuan-qian Li, X. Zou, 2004, Talanta.

Combining gene essentiality with feature selection method to explore multi-cancer biomarkers

Menglong Li, Ziyan Huang, Qifan Kuang, 2017 .

Substituent effects on electronic character of the CN group and trans/cis isomerization in the C-substituted imine derivatives: A computational study

Yanzhi Guo, Meng-long Li, X. Pu, 2010 .

Substituent effects on the hydrogen-bonded complex of aniline–H2O: a computational study

Meng-long Li, X. Pu, N. Wong, 2008 .

Effects of the position and manner of hydration on the stability of solvated N-methylacetamides and the strength of binding between N-methylacetamide and water clusters: a computational study

Yanzhi Guo, Z. Wen, Meng-long Li, 2012, Journal of Molecular Modeling.

Effects of Non‐specific and Specific Solvation on Adsorption of BPTI on Au Surface: Insight from Molecular Dynamics Simulation

Meng-long Li, Wei Yang, X. Pu, 2013 .

Effects of water content on the tetrahedral intermediate of chymotrypsin - trifluoromethylketone in polar and non-polar media: observations from molecular dynamics simulation

Yanzhi Guo, Meng-long Li, X. Pu, 2013, Journal of Molecular Modeling.

QSAR study for cytotoxicity of diterpenoid tanshinones

Ying Xue, Meng-long Li, Yong Guo, 2011, Interdisciplinary Sciences: Computational Life Sciences.

The Effect of Edge Definition of Complex Networks on Protein Structure Identification

Di Wu, Menglong Li, Yizhou Li, 2013, Comput. Math. Methods Medicine.

Identification of microRNA precursors based on random forest with network-level representation method of stem-loop structure

Zheng Fang, Menglong Li, Yizhou Li, 2011, BMC Bioinformatics.

Bipartite network analysis reveals metabolic gene expression profiles that are highly associated with the clinical outcomes of acute myeloid leukemia

Li He, Keqin Liu, Menglong Li, 2017, Comput. Biol. Chem..

A new strategy for exploring the hierarchical structure of cancers by adaptively partitioning functional modules from gene expression network

Menglong Li, Zhining Wen, Runyu Jing, 2016, Scientific Reports.

Comparative Analysis for the Performance of Long-Read-Based Structural Variation Detection Pipelines in Tandem Repeat Regions

Z. Wen, Meng-long Li, Yifan Zhou, 2021, Frontiers in Pharmacology.

Functional dissection of human targets for KSHV-encoded miRNAs using network analysis

Yanzhi Guo, Meng-long Li, X. Pu, 2017, Scientific Reports.

Prediction of Mitochondrial Proteins Using Discrete Wavelet Transform

Kelong Wang, Zhining Wen, Lin Jiang, 2006, The protein journal.

Genome-wide association study combined with biological context can reveal more disease-related SNPs altering microRNA target seed sites

Z. Wen, Meng-long Li, Diabetes-Ling Wu, 2014, BMC Genomics.

In silico method for systematic analysis of feature importance in microRNA-mRNA interactions

Menglong Li, Yizhou Li, Lifang Zhang, 2009, BMC Bioinformatics.

Identification of Hub lncRNAs Along With lncRNA-miRNA-mRNA Network for Effective Diagnosis and Prognosis of Papillary Thyroid Cancer

Yanzhi Guo, Meng-long Li, Yongmei Xie, 2021, Frontiers in Pharmacology.

Predicting disease-associated substitution of a single amino acid by analyzing residue interactions

Li Yang, Menglong Li, Yizhou Li, 2011, BMC Bioinformatics.

Combination use of protein–protein interaction network topological features improves the predictive scores of deleterious non-synonymous single-nucleotide polymorphisms

Meng-long Li, Yizhou Li, L. Ye, 2014, Amino Acids.

A pilot study on identifying gene signatures as markers for predicting patient response to antiseizure medications

Z. Wen, Meng-long Li, Lei Chen, 2023, Neurological Sciences.

Prediction of Synergistic Drug Combinations for Prostate Cancer by Transcriptomic and Network Characteristics

Yanzhi Guo, Z. Wen, Meng-long Li, 2021, Frontiers in Pharmacology.

Drug-Induced Rhabdomyolysis Atlas (DIRA) for idiosyncratic adverse drug reaction management.

Ruili Huang, Weida Tong, Menglong Li, 2019, Drug discovery today.

Expression dynamics and relations with nearby genes of rat transposable elements across 11 organs, 4 developmental stages and both sexes

Z. Wen, Meng-long Li, Yizhou Li, 2017, BMC Genomics.

A Multiple Comprehensive Analysis of scATAC-seq Based on Auto-Encoder and Matrix Decomposition

Menglong Li, Runyu Jing, Yizhou Li, 2021, Symmetry.

Chemometrics-enhanced high performance liquid chromatography strategy for simultaneous determination on seven nitroaromatic compounds in environmental water

Meng-long Li, X. Pu, Yuan Yuan, 2017 .

A Transfer-Learning-Based Deep Convolutional Neural Network for Predicting Leukemia-Related Phosphorylation Sites from Protein Primary Sequences

Yanzhi Guo, Meng-long Li, X. Pu, 2022, International journal of molecular sciences.

An effective seven-CpG-based signature to predict survival in renal clear cell carcinoma by integrating DNA methylation and gene expression.

Yanzhi Guo, Meng-long Li, X. Pu, 2020, Life sciences.

Expression profiling and functional annotation of noncoding genes across 11 distinct organs in rat development

Meng-long Li, Leming Shi, Yuanting Zheng, 2016, Scientific Reports.

Quantitative Structure-Activity Relationship (QSAR) Model for the Severity Prediction of Drug-Induced Rhabdomyolysis by Using Random Forest.

Z. Wen, Meng-long Li, Yuan Liu, 2021, Chemical research in toxicology.

Functional classification of secreted proteins by position specific scoring matrix and auto covariance

Menglong Li, Yanzhi Guo, Lezheng Yu, 2012 .

SBTD: A Novel Method for Detecting Topological Associated Domains from Hi-C Data

Meng-long Li, Yizhou Li, Min Zhu, 2021, Interdisciplinary Sciences: Computational Life Sciences.

A semi-supervised learning based method: Laplacian support vector machine used in diabetes disease diagnosis

Jiang Wu, Ya-Ping Fang, Meng-Long Li, 2009, Interdisciplinary Sciences: Computational Life Sciences.

Prediction of disease‐associated functional variants in noncoding regions through a comprehensive analysis by integrating datasets and features

Meng-long Li, Yizhou Li, Yuan Liu, 2021, Human mutation.

Classification of multi-family enzymes by multi-label machine learning and sequence-based descriptors

Menglong Li, Liqiu Huang, Runyu Jing, 2014 .

Complex tree: the basic framework of protein-protein interaction networks

Jiang Wu, Yizhou Li, Menglong Li, 2010 .

Predicting gene expression levels from histone modification profiles by a hybrid deep learning network

Meng-long Li, Yizhou Li, Jiesi Luo, 2021, Chemometrics and Intelligent Laboratory Systems.

autoBioSeqpy: A Deep Learning Tool for the Classification of Biological Sequences

Yizhou Li, Li Xue, Jiesi Luo, 2020, J. Chem. Inf. Model..

Inductive matrix completion for predicting adverse drug reactions (ADRs) integrating drug–target interactions

Rong Li, Yiming Wu, Yizhou Li, 2015 .

A functional feature analysis on diverse protein–protein interactions: application for the prediction of binding affinity

Wenling Li, Menglong Li, Yanzhi Guo, 2014, Journal of Computer-Aided Molecular Design.

The landscape of miRNA-related ceRNA networks for marking different renal cell carcinoma subtypes

Liu Qin, Menglong Li, Xuemei Pu, 2018, Briefings Bioinform..

GFICLEE: ultrafast tree-based phylogenetic profile method inferring gene function at the genomic-wide level

Meng-long Li, Xu-feng Li, Yi Yang, 2021, BMC genomics.

Predicting deleterious non-synonymous single nucleotide polymorphisms in signal peptides based on hybrid sequence attributes

Di Wu, Juan Li, Menglong Li, 2012, Comput. Biol. Chem..

Using ensemble methods to deal with imbalanced data in predicting protein-protein interactions

Min Zhu, Menglong Li, Yanzhi Guo, 2012, Comput. Biol. Chem..

Simultaneous determination of multiple components in explosives using ultraviolet spectrophotometry and a partial least squares method

Z. Wen, Meng-long Li, X. Pu, 2015 .

A sequence-based computational method for prediction of MoRFs

Yu Wang, Xuemei Pu, Yanzhi Guo, 2017 .

Menglong Li, Zhining Wen, Qifan Kuang, 2015 .

Random Subspace Regression Ensemble for Near-Infrared Spectroscopic Calibration of Tobacco Samples

Menglong Li, Xin Qin, Chao Tan, 2008, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

Predicting G‐protein coupled receptors–G‐protein coupling specificity based on autocross‐covariance transform

Menglong Li, Yanzhi Guo, Zhining Wen, 2006, Proteins.

PRED_PPI: a server for predicting protein-protein interactions based on sequence data with probability assignment

Menglong Li, Xuemei Pu, Yanzhi Guo, 2010, BMC Research Notes.

Improving the Understanding of Pathogenesis of Human Papillomavirus 16 via Mapping Protein-Protein Interaction Network

Menglong Li, Qifan Kuang, Yongcheng Dong, 2015, BioMed research international.

Functional groups prediction from infrared spectra based on computer-assist approaches

Menglong Li, Junhong Liu, Zhimeng Wang, 2020 .

The community structure of human cellular signaling network

Yi Pan, Menglong Li, Jiajian Yin, 2007, Journal of Theoretical Biology.

A Research of Predicting the B-factor Base on the Protein Sequence

Menglong Li, Runyu Jing, Xu Dai, 2014 .

Characteristic wavenumbers of Raman spectra reveal the molecular mechanisms of oral leukoplakia and can help to improve the performance of diagnostic models

Z. Wen, Meng-long Li, X. Pu, 2015 .

Investigating the concordance of Gene Ontology terms reveals the intra- and inter-platform reproducibility of enrichment analysis

Di Wu, Juan Zhang, Gang Yang, 2013, BMC Bioinformatics.

Predicting HIV drug resistance using weighted machine learning method at target protein sequence-level

Yanzhi Guo, Meng-long Li, Jian He, 2021, Molecular Diversity.

Structure-Activity Relationship (SAR) Model for Predicting Teratogenic Risk of Antiseizure Medications in Pregnancy by Using Support Vector Machine

Z. Wen, Meng-long Li, Cheng Chen, 2022, Frontiers in Pharmacology.

Wavelet transform analysis of NMR structure ensembles to reveal internal fluctuations of enzymes

Z. Wen, Meng-long Li, Yizhou Li, 2012, Amino Acids.

Probing Immobilization Mechanism of alpha-chymotrypsin onto Carbon Nanotube in Organic Media by Molecular Dynamics Simulation

Yanzhi Guo, Meng-long Li, X. Pu, 2015, Scientific Reports.

Exploring the relationship between hub proteins and drug targets based on GO and intrinsic disorder

Menglong Li, Xuemei Pu, Yanzhi Guo, 2015, Comput. Biol. Chem..

Uncovering the prognostic gene signatures for the improvement of risk stratification in cancers by using deep learning algorithm coupled with wavelet transform

Z. Wen, Meng-long Li, X. Pu, 2020, BMC Bioinformatics.

Analyzing functional similarity of protein sequences with discrete wavelet transform

Yi Yang, Zhi-ning Wen, Ke-long Wang, 2005, Comput. Biol. Chem..

Protein-Specific Prediction of RNA-Binding Sites Based on Information Entropy

Meng-long Li, Lu Bai, Yue-Yang Ji, 2022, Computational intelligence and neuroscience.

Drug-induced QT Prolongation Atlas (DIQTA) for enhancing cardiotoxicity management.

Z. Wen, Meng-long Li, Mingkun Guo, 2021, Drug discovery today.

Effective prediction of bacterial type IV secreted effectors by combined features of both C-termini and N-termini

Yu Wang, Menglong Li, Xuemei Pu, 2017, Journal of Computer-Aided Molecular Design.

Predicting cis/trans Structure of Alkene Based on Infrared Spectra

Meng-long Li, Gang Yang, Yuxiang Zhang, 2007, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.

Computer-assisted prediction of pesticide substructure using mass spectra.

Menglong Li, Meng-long Li, Qing Xiong, 2007, Analytica chimica acta.

Determination of nicotine in tobacco samples by near-infrared spectroscopy and boosting partial least squares

Menglong Li, Tong Wu, Xin Qin, 2010 .

A consensus subunit-specific model for annotation of substrate specificity for ABC transporters

Menglong Li, Xuemei Pu, Yanzhi Guo, 2015 .

Improving the prediction of chemotherapeutic sensitivity of tumors in breast cancer via optimizing the selection of candidate genes

Juan Zhang, Li He, Menglong Li, 2014, Comput. Biol. Chem..

Exploring functions of long noncoding RNAs across multiple cancers through co-expression network

Meng-long Li, Leming Shi, Yuanting Zheng, 2017, Scientific Reports.

Molecular Mechanism Regarding Allosteric Modulation of Ligand Binding and the Impact of Mutations on Dimerization for CCR5 Homodimer

Xuemei Pu, Yuan Yuan, Yijing Liu, 2019, J. Chem. Inf. Model..

Multi-model predictive analysis of RNA solvent accessibility based on modified residual attention mechanism

Meng-long Li, Jiesi Luo, Yuyao Huang, 2022, Briefings Bioinform..

A comparative study of family-specific protein–ligand complex affinity prediction based on random forest approach

Yu Wang, Menglong Li, Xuemei Pu, 2015, Journal of Computer-Aided Molecular Design.

Functional annotation of sixty-five type-2 diabetes risk SNPs and its application in risk prediction

Meng-long Li, Yizhou Li, Yan Li, 2017, Scientific Reports.

PPM-Dom: A novel method for domain position prediction

Menglong Li, Yuelong Wang, Jing Sun, 2013, Comput. Biol. Chem..

An eigenvalue transformation technique for predicting drug-target interaction

Yan Li, Menglong Li, Yizhou Li, 2015, Scientific Reports.

A kernel matrix dimension reduction method for predicting drug-target interaction

Menglong Li, Ziyan Huang, Qifan Kuang, 2017 .

A Machine Learning-Based QSAR Model for Benzimidazole Derivatives as Corrosion Inhibitors by Incorporating Comprehensive Feature Selection

Ying Xiong, Yanzhi Guo, Li Yuan, 2019, Interdisciplinary Sciences: Computational Life Sciences.

Visualizing the topology and re-analyzing the causes of small-world property of amino acid network

Min Zhu, Menglong Li, Yangxu Wang, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Comprehensive characterization of pathological stage‐related genes of papillary thyroid cancer along with survival prediction

Yanzhi Guo, Meng-long Li, Lei Xu, 2021, Journal of cellular and molecular medicine.

Identifying oncogenes as features for clinical cancer prognosis by Bayesian nonparametric variable selection algorithm

Menglong Li, Zhining Wen, Yongning Yang, 2015 .

Ensemble Multivariate Calibration Based on Mutual Information for Food Analysis Using Near-Infrared Spectroscopy

Meng-long Li, Chao Tan, Xin Qin, 2010 .

Prediction of multicomponent reaction yields using machine learning

Meng-long Li, Yizhou Li, Chuan‐Kun Ran, 2021 .

Improving Model Performance on the Stratification of Breast Cancer Patients by Integrating Multiscale Genomic Features

Z. Wen, Meng-long Li, Runyu Jing, 2020, BioMed research international.

Nonnegative matrix factorization for the improvement in sensitivity of discovering potentially disease-related genes

Menglong Li, Zhining Wen, Liqiu Huang, 2013 .

Coupling complementary strategy to flexible graph neural network for quick discovery of coformer in diverse co-crystal materials

Yanzhi Guo, Meng-long Li, X. Pu, 2021, Nature Communications.

Systematic analysis revealed better performance of random forest algorithm coupled with complex network features in predicting microRNA precursors

Zheng Fang, Yizhou Li, Menglong Li, 2012 .

A Systematic Investigation of Computation Models for Predicting Adverse Drug Reactions (ADRs)

Menglong Li, Qifan Kuang, Yizhou Li, 2014, PloS one.

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Todd H. Stokes, Kevin C. Dorff, Aaron M. Smalter, 2010, Nature Biotechnology.

On the relation between residue flexibility and residue interactions in proteins.

Meng-long Li, Yizhou Li, Hui Yin, 2011, Protein and peptide letters.

A sequence-based two-level method for the prediction of type I secreted RTX proteins.

Menglong Li, Xuemei Pu, Yanzhi Guo, 2015, The Analyst.

Uncovering the prognostic gene signatures for the improvement of risk stratification in cancers by using deep learning algorithm coupled with wavelet transform

Zhining Wen, Yiru Zhao, Yifan Zhou, 2020, BMC Bioinformatics.

Prediction of adverse drug reactions by a network based external link prediction method

Yizhou Li, Yongqing Zhang, Menglong Li, 2013 .

Prediction of flavin mono-nucleotide binding sites using modified PSSM profile and ensemble support vector machine

Xia Wang, Juan Li, Menglong Li, 2012, Comput. Biol. Medicine.

Using the improved position specific scoring matrix and ensemble learning method to predict drug-binding residues from protein sequences

Xuemei Pu, Yanzhi Guo, Juan Li, 2012 .

Genetic Contexts Characterize Dynamic Histone Modification Patterns Among Cell Types

Meng-long Li, Yizhou Li, Yanmei Lin, 2019, Interdisciplinary Sciences: Computational Life Sciences.

Position-specific prediction of methylation sites from sequence conservation based on information theory

Menglong Li, Yanzhi Guo, Yinan Shi, 2015, Scientific Reports.

Subspace Regression Ensemble Method Based on Variable Clustering for Near-Infrared Spectroscopic Calibration

Menglong Li, Xin Qin, Chao Tan, 2009 .

Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

Yuan Liu, Li He, Keqin Liu, 2017, BMC Bioinformatics.

PML: A parallel machine learning toolbox for data classification and regression

Jing Sun, Xuemei Pu, Yuelong Wang, 2014 .

Multi-models in predicting RNA solvent accessibility exhibit the contribution from none-sequential attributes and providing a globally stable modeling strategy

Yuan Liu, Menglong Li, Yizhou Li, 2020 .

An Ensemble Classifier of Support Vector Machines Used to Predict Protein Structural Classes by Fusing Auto Covariance and Pseudo-Amino Acid Composition

Chao Wang, Jiang Wu, Meng-Long Li, 2010, The protein journal.