A. Brazma
发表
I. Jonassen,
A. Brazma,
J. Vilo,
1998,
Genome research.
C. Sander,
B. Steipe,
P. Bork,
2004,
Nature Biotechnology.
A. Brazma,
J. Vilo,
2000,
FEBS letters.
Jason E. Stewart,
C. Ball,
G. Sherlock,
2002,
Genome Biology.
C. Ball,
J. Matese,
M. Ringwald,
2004,
Environmental Health Perspectives.
Jason E. Stewart,
Irene F. Kim,
F. Holstege,
2001,
Nature Genetics.
P. Kemmeren,
F. Holstege,
A. Brazma,
2002,
Molecular cell.
A. Brazma,
K. Kivinen,
R. Lyne,
2003,
Molecular biology of the cell.
Bart De Moor,
Yves Moreau,
Steffen Durinck,
2005,
Bioinform..
A. Brazma,
M. Krestyaninova,
L. Soinov,
2003,
Genome Biology.
Raymond K. Auerbach,
William Stafford Noble,
Stephen C. J. Parker,
2012,
Nature.
Pedro G. Ferreira,
M. Pirinen,
P. Donnelly,
2013,
Nature.
Maria Jesus Martin,
Claire O'Donovan,
Rolf Apweiler,
2003,
Nucleic Acids Res..
H. Parkinson,
A. Brazma,
E. Ukkonen,
2010,
Nature Biotechnology.
A. Brazma,
1993,
COLT '93.
Nuno A. Fonseca,
Wojciech Bazant,
Elisabet Barrera,
2017,
Nucleic Acids Res..
J. Harrow,
A. Frankish,
A. Brazma,
2013,
Genome Biology.
A. Brazma,
Ugis Sarkans,
M. Krestyaninova,
2006,
Nature Reviews Genetics.
Ronald C. Taylor,
Roger E Bumgarner,
C. Ball,
2006,
Omics : a journal of integrative biology.
C. Ball,
J. Matese,
M. Ringwald,
2004,
PLoS biology.
A. Brazma,
J. Rung,
2012,
Nature Reviews Genetics.
Raymond K. Auerbach,
William Stafford Noble,
Stephen C. J. Parker,
2011,
PLoS biology.
Trevor Hastie,
Joelle Pineau,
Robert Tibshirani,
2020,
Nature.
H. Najafabadi,
A. Brazma,
J. Rung,
2018,
Oncotarget.
Gary D Bader,
Benjamin J. Raphael,
Joshua M. Stuart,
2010,
Nature.
Gunnar Rätsch,
Nuno A. Fonseca,
André Kahles,
2019,
Cell.
Alvis Brazma,
Michael D. Wilson,
Stephen Watt,
2022
.
P. Lio’,
A. Brazma,
K. Kivinen,
2004,
Nature Genetics.
A. Brazma,
J. Bähler,
B. Wilhelm,
2009,
PLoS genetics.
Steven J. M. Jones,
Nuno A. Fonseca,
Icgc,
2020,
Nature.
Fabian J Theis,
D. Pe’er,
A. Regev,
2020,
Cell.
H. Parkinson,
A. Brazma,
J. Rung,
2010,
Genome Biology.
Michael D. Wilson,
D. Odom,
J. Marioni,
2013,
Cell.
R. Aebersold,
J. Marioni,
A. Brazma,
2017,
Cell Reports.
R. Bernards,
A. Brazma,
H. Horlings,
2013,
The Journal of pathology.
Nuno A. Fonseca,
Jonathan M. Mudge,
J. Harrow,
2015,
BMC Genomics.
Gunnar Rätsch,
Mark Gerstein,
Li Ding,
2017,
bioRxiv.
Alvis Brazma,
Afzal N. Chaudhry,
Paul A. Lyons,
2010,
Nature Medicine.
Nuno A. Fonseca,
Robert Petryszak,
Irene Papatheodorou,
2019,
Nucleic Acids Res..
G. Rätsch,
A. Brazma,
O. Stegle,
2017,
bioRxiv.
Gunnar Rätsch,
Junjun Zhang,
Nuno A. Fonseca,
2017
.
Bálint Antal,
Alvis Brazma,
Anatole Chessel,
2017
.
Thorsten Henrich,
Mirana Ramialison,
John Quackenbush,
2008,
Nature Biotechnology.
Christian J. Stoeckert,
Alvis Brazma,
Catherine A. Ball,
2004
.
Nigel W. Hardy,
Chris F. Taylor,
Andrew R. Jones,
2007,
Nature Biotechnology.
Pedro G. Ferreira,
M. Rivas,
R. Guigó,
2016,
Scientific Reports.
Marco Brandizi,
Helen E. Parkinson,
Alvis Brazma,
2011,
Nucleic Acids Res..
Aedín C. Culhane,
Robert Petryszak,
James Malone,
2011,
Nucleic Acids Res..
Michael Lappe,
Esko Ukkonen,
Alvis Brazma,
2003,
Genome research.
Mark Gerstein,
Benedict Paten,
Paul Flicek,
2017,
bioRxiv.
Son K. Pham,
Ian T. Fiddes,
Bronwen L. Aken,
2017,
bioRxiv.
A. Brazma,
J. Bähler,
S. Marguerat,
2014,
RNA biology.
Nuno A. Fonseca,
D. Bishop,
A. Brazma,
2020,
bioRxiv.
Martin Vingron,
Esko Ukkonen,
Thomas Manke,
2009,
Genome Biology.
N. Kurbatova,
A. Brazma,
H. Soininen,
2020,
Scientific Reports.
A. Brazma,
Rui Camacho,
B. Cavadas,
2020,
Microorganisms.
Nuno A. Fonseca,
A. Brazma,
C. Creighton,
2017,
bioRxiv.
Alvis Brazma,
Misha Kapushesky,
Christian Schwager,
2006,
Bioinform..
Nuno A. Fonseca,
Angela N. Brooks,
Stefan G. Stark,
2017,
bioRxiv.
Satoru Miyano,
Tatsuya Akutsu,
Alvis Brazma,
2008,
APBC.
V. P. Collins,
Matthew D. Young,
N. Kurbatova,
2017,
Scientific Reports.
Deanne M. Taylor,
S. Teichmann,
J. Marioni,
2019,
Nature Biotechnology.
Masahiro Yoshida,
Fabian J. Theis,
Oliver Eickelberg,
2020,
Nature Medicine.
Esko Ukkonen,
Jaak Vilo,
Alvis Brazma,
1997,
German Conference on Bioinformatics.
J. Ellenberg,
A. Brazma,
J. Hériché,
2022,
bioRxiv.
Alvis Brazma,
A. Brazma,
2001,
Bioinform..
Andrew F. Jarnuczak,
A. Brazma,
I. Papatheodorou,
2019,
bioRxiv.
A. Brazma,
Mathias Wilhelm,
E. Deutsch,
2021,
Nature Communications.
Ibrahim Emam,
James Malone,
Helen E. Parkinson,
2009,
Nucleic Acids Res..
Paul T. Spellman,
John Quackenbush,
Yoshio Tateno,
2004,
Environmental health perspectives.
Nuno A. Fonseca,
Angela N. Brooks,
David T. W. Jones,
2020,
Nature Communications.
A. Børresen-Dale,
A. Brazma,
E. Hovig,
2016,
International journal of cancer.
Alvis Brazma,
A. Brazma,
2020,
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature.
Esko Ukkonen,
Jaak Vilo,
Alvis Brazma,
2002,
ECCB.
Alvis Brazma,
A. Brazma,
1993,
Scandinavian Conference on AI.
Duccio Cavalieri,
John Quackenbush,
Terry Gaasterland,
2002,
Bioinformatics.
The IronChip evaluation package: a package of perl modules for robust analysis of custom microarrays
Alvis Brazma,
Thomas Dandekar,
Yevhen Vainshtein,
2010,
BMC Bioinformatics.
Karlis Cerans,
Alvis Brazma,
Juris Viksna,
2019,
BMC Bioinformatics.
A. Brazma,
Ugis Sarkans,
2005
.
Nuno A. Fonseca,
John C. Marioni,
Alvis Brazma,
2014,
bioRxiv.
Kazuho Ikeo,
Yoshio Tateno,
Alvis Brazma,
2003,
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme.
A. Brazma,
Mathias Wilhelm,
E. Deutsch,
2021,
Nature Communications.
L. Groop,
A. Brazma,
J. Rung,
2015,
Skeletal Muscle.
Helge G. Roider,
A. Brazma,
E. Ukkonen,
2008
.
Catherine Brooksbank,
Duccio Cavalieri,
Paul T. Spellman,
2002,
Bioinform..
A. Brazma,
2019,
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature.
Fabian J Theis,
D. Pe’er,
A. Regev,
2020,
Nature Medicine.
A. Brazma,
Zhichao Miao,
I. Papatheodorou,
2022,
bioRxiv.
A. Brazma,
J. Vizcaíno,
Mathias Walzer,
2021,
Nucleic Acids Res..
Martin Eisenacher,
Johannes Griss,
Juan Antonio Vizcaíno,
2018,
Nucleic Acids Res..
A. Brazma,
J. Rung,
B. Ferreira,
2019,
npj Vaccines.
Karlis Cerans,
Alvis Brazma,
A. Brazma,
1997,
New Generation Computing.
Alvis Brazma,
A. Brazma,
1994,
AII/ALT.
Fabian J Theis,
Alison Yu,
Alex K. Shalek,
2020,
SSRN Electronic Journal.
Sergio Contrino,
Helen E. Parkinson,
Susanna-Assunta Sansone,
2004,
Nucleic Acids Res..
Robert Petryszak,
Maria Keays,
Marco Brandizi,
2014,
Nucleic Acids Res..
S. Teichmann,
A. Brazma,
Zhichao Miao,
2021,
Nature Methods.
Kyle J. Gaulton,
David S. Fischer,
Malte D. Luecken,
2021,
Nature Medicine.
Mary Goldman,
Nuno A. Fonseca,
Brian Craft,
2020,
Nature.
Aurora Torrente,
Helen Parkinson,
Alvis Brazma,
2016,
PloS one.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2020,
Nature.
A. Brazma,
Zhichao Miao,
I. Papatheodorou,
2023,
bioRxiv.
Esko Ukkonen,
Inge Jonassen,
Jaak Vilo,
1998,
ICGI.
Mahesan Niranjan,
Alvis Brazma,
Steven Russell,
2007,
PLoS Comput. Biol..
Nuno A. Fonseca,
Robert Petryszak,
Anja Füllgrabe,
2018,
Nucleic Acids Res..
Irene Papatheodorou,
Alvis Brazma,
Pablo Moreno,
2020,
Nature Methods.
Edgars Celms,
Martins Opmanis,
Andris Zarins,
2014,
Nature Communications.
Helen E. Parkinson,
Susanna-Assunta Sansone,
Philippe Rocca-Serra,
2003,
Nucleic Acids Res..
A. Brazma,
Jean Monlong,
G. Bourque,
2017,
Scientific Reports.
Nuno A. Fonseca,
Alvis Brazma,
John Marioni,
2014,
bioRxiv.
Nuno A. Fonseca,
Robert Petryszak,
Maria Keays,
2013,
Nucleic Acids Res..
Helen E. Parkinson,
Alvis Brazma,
Ugis Sarkans,
2006,
Nucleic Acids Res..
Jaak Vilo,
Alvis Brazma,
A. Brazma,
2001
.
Esko Ukkonen,
Alan J. Robinson,
Inge Jonassen,
2000,
ISMB.
H. Najafabadi,
A. Brazma,
M. Lathrop,
2018,
Cell reports.
A. Regev,
A. Nicholson,
A. Brazma,
2021,
Nature Communications.
Nuno A. Fonseca,
John C. Marioni,
Alvis Brazma,
2012,
Bioinform..
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2020,
Nature Communications.
A. Brazma,
I. Papatheodorou,
G. Ozhan,
2022,
Frontiers in Cell and Developmental Biology.
Nuno A. Fonseca,
Alvis Brazma,
Liliana Greger,
2017,
bioRxiv.
Alvis Brazma,
Thomas Schlitt,
A. Brazma,
2005,
FEBS letters.
James C. Wright,
Jonathan M. Mudge,
Hendrik Weisser,
2016,
Nature Communications.
Alvis Brazma,
Emmanouil T. Dermitzakis,
Johan Rung,
2014,
PloS one.
Ibrahim Emam,
Marco Brandizi,
Faisal Ibne Rezwan,
2008,
Nucleic Acids Res..
Anna Zhukova,
James Malone,
Helen E. Parkinson,
2010,
Bioinform..
James C. Wright,
Emanuel J. V. Gonçalves,
A. Brazma,
2018
.
Rodrigo Dienstmann,
Justin Guinney,
Julio Saez-Rodriguez,
2016,
bioRxiv.
Olaf Wolkenhauer,
Blaz Zupan,
Ravi Iyengar,
2009,
Molecular oncology.
Samuel Kaski,
Ali Faisal,
Eeva Kettunen,
2011,
Bioinform..
A. Brazma,
J. Vilo,
2001,
FEBS letters.
D. Odom,
J. Marioni,
A. Brazma,
2015,
PloS one.
Nuno A. Fonseca,
A. Brazma,
C. Creighton,
2022,
Nature communications.
Graham Cameron,
Michael Ashburner,
Alvis Brazma,
2000,
Nature.
Paul T. Spellman,
Rafael A. Irizarry,
John Quackenbush,
2006,
BMC Bioinformatics.
Aurora Torrente,
Alvis Brazma,
Leo Lahti,
2012,
Nucleic acids research.
Alvis Brazma,
A. Brazma,
2009,
TheScientificWorldJournal.
Nigel W. Hardy,
Chris F. Taylor,
John M. Hancock,
2008,
Nature Biotechnology.
Nuno A. Fonseca,
Elisabet Barrera,
Robert Petryszak,
2015,
Nucleic Acids Res..
Paul Flicek,
Alvis Brazma,
Klara Stefflova,
2012,
Genome research.
A. Brazma,
M. Lathrop,
S. Bhattarai,
2020,
British Journal of Cancer.
Nuno A. Fonseca,
Angela N. Brooks,
G. Rätsch,
2017,
bioRxiv.
Ibrahim Emam,
Marco Brandizi,
James Malone,
2010,
Nucleic Acids Res..
A. Brazma,
Zhichao Miao,
P. Moreno,
2021,
Scientific Reports.
A. Brazma,
Zhichao Miao,
P. Moreno,
2021,
bioRxiv.
Audrey Kauffmann,
Helen E. Parkinson,
Wolfgang Huber,
2009,
Bioinform..
Thorsten Henrich,
Joachim Wittbrodt,
Peer Bork,
2007,
Nucleic Acids Res..
John Quackenbush,
Yoshio Tateno,
Helen Parkinson,
2004,
Microbiology.
Duccio Cavalieri,
John Quackenbush,
Terry Gaasterland,
2002,
Science.
A. Brazma,
J. Rung,
B. Ferreira,
2019,
npj Vaccines.
L. M. Voortman,
E. Birney,
J. Ellenberg,
2021,
Nature Methods.
Johanna R. McEntyre,
Alvis Brazma,
Ugis Sarkans,
2017,
Nucleic Acids Res..
Robert Gentleman,
John Quackenbush,
Wolfgang Huber,
2006,
Nature.
Irene Papatheodorou,
Alvis Brazma,
Ugis Sarkans,
2020,
Nucleic Acids Res..
Mark I. McCarthy,
Alvis Brazma,
Johan Rung,
2010,
Bioinform..
Maria Keays,
Ibrahim Emam,
Marco Brandizi,
2012,
Nucleic Acids Res..
Alvis Brazma,
Katherine Lawler,
Kim E. Hammond-Kosack,
2013,
BMC Systems Biology.
Alvis Brazma,
Thomas Schlitt,
A. Brazma,
2007,
BMC Bioinformatics.
Alvis Brazma,
Thomas Schlitt,
A. Brazma,
2002,
Comparative and functional genomics.
Bálint Antal,
Alvis Brazma,
Anatole Chessel,
2018,
Nature Methods.
Bálint Antal,
Alvis Brazma,
Anatole Chessel,
2017,
Nature Methods.
Esko Ukkonen,
Inge Jonassen,
Jaak Vilo,
1998,
German Conference on Bioinformatics.
Ravi Shankar,
Michael Miller,
Helen E. Parkinson,
2010,
Bioinform..
Aedín C. Culhane,
Meelis Kull,
Aurora Torrente,
2004,
Nucleic Acids Res..
Nuno A. Fonseca,
G. Rätsch,
A. Brazma,
2018
.
A. Brazma,
A. Harris,
M. Lathrop,
2020,
British Journal of Cancer.
J. Marioni,
A. Brazma,
M. Tello-Ruiz,
2021,
Nucleic Acids Res..
Edgars Celms,
Juan Antonio Vizcaíno,
Lelde Lace,
2020,
Proteomics.
Aedín C. Culhane,
Alvis Brazma,
A. Brazma,
2005
.
Alvis Brazma,
Mar Gonzàlez-Porta,
A. Brazma,
2014,
bioRxiv.
David R. Gilbert,
Inge Jonassen,
Alvis Brazma,
1998,
J. Comput. Biol..
Alvis Brazma,
A. Brazma,
1995,
EuroCOLT.
Karlis Cerans,
Alvis Brazma,
A. Brazma,
1994,
AII/ALT.
Aurora Torrente,
Alvis Brazma,
Misha Kapushesky,
2005,
Bioinform..
A. Brazma,
J. Hériché,
V. Uhlmann,
2022,
bioRxiv.
Alvis Brazma,
Andrew Tikhonov,
Misha Kapushesky,
2011,
Bioinform..
Esko Ukkonen,
Jaak Vilo,
Alvis Brazma,
1997,
ISMB.
F. Holstege,
C. Wijmenga,
A. Brazma,
2007,
Genome Biology.
A. Brazma,
I. Papatheodorou,
G. Ozhan,
2022
.
Alvis Brazma,
Nils Gehlenborg,
A. Brazma,
2009,
BMC Bioinformatics.
L. Groop,
A. Brazma,
J. Rung,
2016,
Molecular and Cellular Endocrinology.
Nuno A. Fonseca,
Robert Petryszak,
Anja Füllgrabe,
2017,
Bioinform..
A. Brazma,
Zhichao Miao,
I. Papatheodorou,
2022,
Frontiers in Immunology.
Sergio Contrino,
Helen E. Parkinson,
Susanna-Assunta Sansone,
2005,
Bioinform..
Alvis Brazma,
Ugis Sarkans,
Jo McEntyre,
2015,
Molecular Systems Biology.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2017,
bioRxiv.
Helen Parkinson,
Alvis Brazma,
Ugis Sarkans,
2006,
Methods in enzymology.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2023,
Nature.
Klaus A. Kuhn,
Marco Brandizi,
Mikael Linden,
2017,
BMC Medical Informatics and Decision Making.
Nuno A. Fonseca,
Gary D Bader,
Benjamin J. Raphael,
2019,
Nature Communications.
Nuno A. Fonseca,
Robert Petryszak,
John C. Marioni,
2014,
bioRxiv.
Bálint Antal,
Alvis Brazma,
Ugis Sarkans,
2016,
bioRxiv.
Nigel W. Hardy,
Chris F. Taylor,
Marco Brandizi,
2008,
Omics : a journal of integrative biology.
Roger E Bumgarner,
John Quackenbush,
A. Brazma,
2021,
bioRxiv.
J. Ellenberg,
A. Brazma,
J. Hériché,
2023,
bioRxiv.
A. Brazma,
J. Swedlow,
G. Kleywegt,
2022,
Journal of molecular biology.
A. Brazma,
J. Swedlow,
G. Kleywegt,
2021,
bioRxiv.
Ardan Patwardhan,
Ewan Birney,
Charles E. Cook,
2018,
Nature Methods.
Alvis Brazma,
Catherine A Ball,
C. Ball,
2006,
Omics : a journal of integrative biology.
Charles E. Cook,
E. Birney,
J. Ellenberg,
2018,
Nature Methods.
Trevor Hastie,
Joelle Pineau,
Robert Tibshirani,
2020,
2003.00898.
Sergio Contrino,
Helen Parkinson,
Susanna-Assunta Sansone,
2003,
Comptes rendus biologies.
Walter R. Gilks,
Alvis Brazma,
Brian D. M. Tom,
2005,
ECCB/JBI.
Alvis Brazma,
Thomas Schlitt,
A. Brazma,
2003,
Genome Biology.
L. Egevad,
A. Brazma,
G. Bourque,
2023,
Clinical Cancer Research.
Karlis Podnieks,
Andris Zarins,
Mark I. McCarthy,
2009,
Bioinform..
Martin Vingron,
Alvis Brazma,
Ugis Sarkans,
2002,
Advances in biochemical engineering/biotechnology.
Jaak Vilo,
Alvis Brazma,
Johan Rung,
2002,
ECCB.
A. Brazma,
Zhichao Miao,
I. Papatheodorou,
2023,
bioRxiv.
A. Brazma,
I. Papatheodorou,
G. Ozhan,
2023,
bioRxiv.
Samuel Kaski,
Ali Faisal,
Alvis Brazma,
2009,
BMC Bioinformatics.
Gavin Sherlock,
Alvis Brazma,
Catherine A Ball,
2004,
Nature Biotechnology.
John Quackenbush,
Alvis Brazma,
Helen C. Causton,
2003
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Alvis Brazma,
Thomas Schlitt,
A. Brazma,
2006,
Philosophical Transactions of the Royal Society B: Biological Sciences.
Helen Parkinson,
Alvis Brazma,
Ugis Sarkans,
2008,
Current protocols in bioinformatics.
B. Moor,
S. Durinck,
A. Brazma,
2005,
Bioinform..
Samuel Kaski,
Sohan Seth,
Alvis Brazma,
2015,
Bioinform..
B. Moor,
S. Durinck,
A. Brazma,
2005
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Edgars Celms,
Martins Opmanis,
Karlis Podnieks,
2007,
BMC Bioinformatics.
Nuno A. Fonseca,
Benjamin J. Raphael,
Allison P. Heath,
2020,
Nature Communications.
R. Aebersold,
J. Marioni,
A. Brazma,
2017,
Cell reports.
A. Regev,
A. Nicholson,
A. Brazma,
2020,
Nature Communications.
Alvis Brazma,
Juris Viksna,
Dace Ruklisa,
2005,
Genome informatics. International Conference on Genome Informatics.
Nuno A. Fonseca,
J. Marioni,
A. Brazma,
2014,
bioRxiv.
Alvis Brazma,
Ugis Sarkans,
Gabriella Rustici,
2015,
Bioinform..
A. Brazma,
2018,
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature.
I. Jonassen,
A. Brazma,
J. Vilo,
1999,
Nature Genetics.
Audrey Kauffmann,
Martin Kuiper,
James Malone,
2011,
BioTechniques.
D. Odom,
A. Brazma,
C. Kutter,
2011,
Nature Genetics.
A. Brazma,
C. Kutter,
Gordon D. Brown,
2012
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Ronald C. Taylor,
Roger E Bumgarner,
C. Ball,
2008,
Nature Biotechnology.
Fabian J Theis,
D. Pe’er,
A. Regev,
2020,
Nature Medicine.
A. Brazma,
P. MacAry,
E. McKinney,
2010,
Nature Medicine.
J. Harrow,
A. Frankish,
A. Brazma,
2013,
Genome Biology.
M. Bihoreau,
S. Heath,
A. Brazma,
2014,
Nature Communications.
Angela N. Brooks,
G. Rätsch,
A. Brazma,
2017
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Richard K. Ferguson,
A. Brazma,
J. Swedlow,
2017,
Nature Methods.
Helen Parkinson,
Alvis Brazma,
Thomas Schlitt,
2008
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A. Brazma,
M. Kapushesky,
Andrew Tikhonov,
2011,
Bioinform..
Tim F. Rayner,
C. Ball,
G. Sherlock,
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