Xiuqing Zhang

Xiuqing Zhang, Hui Jiang, T. Lau, 2012, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.

Potential association factors for developing effective peptide-based cancer vaccines

Xiuqing Zhang, B. Li, Jianrong Li, 2022, Frontiers in Immunology.

Identification of shared neoantigens in esophageal carcinoma by the combination of comprehensive analysis of genomic data and in silico neoantigen prediction.

Bo Li, Xiuqing Zhang, Chao Chen, 2022, Cellular Immunology.

Plasma Exo-miRNAs Correlated with AD-Related Factors of Chinese Individuals Involved in Aβ Accumulation and Cognition Decline

Huanming Yang, Xiuqing Zhang, C. Nie, 2021, Molecular Neurobiology.

The co-stimulation of anti-CD28 and IL-2 enhances the sensitivity of ELISPOT assays for detection of neoantigen-specific T cells in PBMC.

Leo J. Lee, Xiuqing Zhang, Linnan Zhu, 2020, Journal of immunological methods.

The co-stimulation of anti-CD28 and IL-2 enhances the sensitivity of ELISPOT assays for detection of neoantigen-specific T cells in PBMC

Leo J. Lee, Xiuqing Zhang, Linnan Zhu, 2019, bioRxiv.

Circle‐Seq reveals genomic and disease‐specific hallmarks in urinary cell‐free extrachromosomal circular DNAs

Huanming Yang, L. Bolund, Xiuqing Zhang, 2022, Clinical and translational medicine.

Noninvasive prenatal paternity testing by maternal plasma DNA sequencing in twin pregnancies

Yanyan Zhang, Xiuqing Zhang, N. Qu, 2020, Electrophoresis.

Evaluating the Effects of Storage Conditions on Multiple Cell-Free RNAs in Plasma by High-Throughput Sequencing.

Xiuqing Zhang, Qing Zhou, Fang Chen, 2022, Biopreservation and biobanking.

A Comparison of Rice Chloroplast Genomes

Huanming Yang, Xiuqing Zhang, Songnian Hu, 2004 .

Molecular Signatures of Major Depression

Warren W. Kretzschmar, J. Marchini, Huanming Yang, 2015, Current Biology.

Genomic analysis of liver cancer unveils novel driver genes and distinct prognostic features

Huanming Yang, Jun Yu, S. Wong, 2018, Theranostics.

three commercial human whole-exome capture platforms.

C. Tyler-Smith, G. Tian, Xiuqing Zhang, 2011 .

Transcriptome Analyses of β-Thalassemia −28(A>G) Mutation Using Isogenic Cell Models Generated by CRISPR/Cas9 and Asymmetric Single-Stranded Oligodeoxynucleotides (assODNs)

Xiuqing Zhang, Haixi Sun, Ziheng Zhou, 2020, Frontiers in Genetics.

Transcriptome analyses of β-thalassemia -28 (A>G) mutation using isogenic cell models generated by CRISPR/Cas9 and asymmetric single-stranded oligodeoxynucleotides (assODN)

Xiuqing Zhang, Haixi Sun, Ziheng Zhou, 2020, bioRxiv.

Integrative cross-species analysis of GABAergic neuron cell types and their functions in Alzheimer’s disease

Xiuqing Zhang, Haoyu Wang, Dongsheng Chen, 2022, Scientific Reports.

HLA-A Gene Polymorphism Defined by High-Resolution Sequence-Based Typing in 161 Northern Chinese Han People

Huanming Yang, Jian Wang, Xiuqing Zhang, 2003, Genomics, proteomics & bioinformatics.

LION: a simple and rapid method to achieve CRISPR gene editing

L. Bolund, Xiuqing Zhang, Xin Liu, 2019, Cellular and Molecular Life Sciences.

Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis

Fei Gao, Huanming Yang, Mingyuan Liu, 2012, Genome Biology.

Osmotic stress induced by sodium chloride, sucrose or trehalose improves cryotolerance and developmental competence of porcine oocytes.

Huanming Yang, L. Bolund, Xiuqing Zhang, 2009, Reproduction, fertility, and development.

Elevated NaCl concentration improves cryotolerance and developmental competence of porcine oocytes.

Huanming Yang, Y. Liu, L. Bolund, 2009, Reproductive biomedicine online.

High hydrostatic pressure treatment of porcine oocytes induces parthenogenetic activation.

Huanming Yang, L. Bolund, Xiuqing Zhang, 2010, Cellular reprogramming.

Laparoscopic adjustable banded roux-en-y gastric bypass as a primary procedure for the super-super-obese (body mass index > 60 kg/m2)

Wei-Mou Zheng, Songgang Li, Xiuqing Zhang, 2010 .

Aseptic minimum volume vitrification technique for porcine parthenogenetically activated blastocyst.

Huanming Yang, L. Bolund, Xiuqing Zhang, 2011, Cryo letters.

Deciphering neo-sex and B chromosome evolution by the draft genome of Drosophila albomicans

Jun Wang, Jue Ruan, Xiuqing Zhang, 2012, BMC Genomics.

Massively Parallel Sequencing for Chromosomal Abnormality Testing in Trophectoderm Cells of Human Blastocysts1

Xiuqing Zhang, Y. Liang, Hui Jiang, 2013, Biology of reproduction.

Haplotype-assisted accurate non-invasive fetal whole genome recovery through maternal plasma sequencing

Jian Wang, Wei Wang, Hui Jiang, 2013, Genome Medicine.

Integrated detection of both 5-mC and 5-hmC by high-throughput tag sequencing technology highlights methylation reprogramming of bivalent genes during cellular differentiation

Huanming Yang, Jun Wang, Xiuqing Zhang, 2013, Epigenetics.

Detection and Analysis of Human Papillomavirus (HPV) DNA in Breast Cancer Patients by an Effective Method of HPV Capture

Xiuqing Zhang, Xiao Liu, X. Zhuang, 2014, PloS one.

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

Huanming Yang, Jian Wang, Xiuqing Zhang, 2019, bioRxiv.

Excess of Rare Variants in Genes that are Key Epigenetic Regulators of Spermatogenesis in the Patients with Non-Obstructive Azoospermia

Huanming Yang, Z. Cai, Zesong Li, 2015, Scientific Reports.

Noninvasive Prenatal Diagnosis of Fetal Trisomy 18 and Trisomy 13 by Maternal Plasma DNA Sequencing

Peiyong Jiang, Yama W. L. Zheng, Tak Y. Leung, 2011, PloS one.

Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma

Xiuqing Zhang, L. Tang, Hui Jiang, 2016, Nature Communications.

An ATAC-seq atlas of chromatin accessibility in mouse tissues

B. Peters, Wenwei Zhang, Xiuqing Zhang, 2019, Scientific Data.

Sequencing bias: comparison of different protocols of MicroRNA library construction

G. Tian, L. Bolund, Xiuqing Zhang, 2011, BMC Biotechnology.

Sequencing bias: comparison of different protocols of MicroRNA library construction

G. Tian, L. Bolund, Xiuqing Zhang, 2010, BMC biotechnology.

The DNA sequence, annotation and analysis of human chromosome 3

Wei Huang, Hans Lehrach, Paul Havlak, 2006, Nature.

D-GPM: A Deep Learning Method for Gene Promoter Methylation Inference

Xiuqing Zhang, Shuaicheng Li, Xingxin Pan, 2018, bioRxiv.

A method for noninvasive detection of fetal large deletions/duplications by low coverage massively parallel sequencing

Ping Liu, Songgang Li, Xiuqing Zhang, 2013, Prenatal diagnosis.

Gene expression profiling in rice young panicle and vegetative organs and identification of panicle-specific genes through known gene functions

Huanming Yang, Jian Wang, Xiuqing Zhang, 2005, Molecular Genetics and Genomics.

Non-invasive prenatal assessment of trisomy 21 by multiplexed maternal plasma DNA sequencing: large scale validity study

Yama W. L. Zheng, Xiuqing Zhang, K. Nicolaides, 2011, BMJ : British Medical Journal.

Genomic basis for RNA alterations in cancer

Mary Goldman, Nuno A. Fonseca, Brian Craft, 2020, Nature.

Rift Valley Fever Virus and Yellow Fever Virus in Urine: A Potential Source of Infection

Xiuqing Zhang, Y. Bi, Jinmin Ma, 2019, Virologica Sinica.

Whole-genome and Transcriptome Sequencing of Prostate Cancer Identify New Genetic Alterations Driving Disease Progression.

Huanming Yang, Hancheng Zheng, Xiuqing Zhang, 2017, European urology.

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

Huanming Yang, K. Kristiansen, Ruiqiang Li, 2010, PLoS biology.

Deep sequencing reveals small RNA characterization of invasive micropapillary carcinomas of the breast

Wenwei Zhang, Meihua Gong, Shuai Li, 2012, Breast Cancer Research and Treatment.

Frequent alterations in cytoskeleton remodelling genes in primary and metastatic lung adenocarcinomas

Xun Xu, Yong Hou, Zhiyu Peng, 2015, Nature Communications.

A comparison of isolated circulating tumor cells and tissue biopsies using whole-genome sequencing in prostate cancer

Shuang Hou, Yong Hou, Huanming Yang, 2015, Oncotarget.

Comparative mRNA and microRNA Expression Profiling of Three Genitourinary Cancers Reveals Common Hallmarks and Cancer-Specific Molecular Events

Yong Wang, Zhiyu Peng, Zhiming Cai, 2011, PloS one.

Preparing a re-sequencing DNA library of 2 cancer candidate genes using the ligation-by-amplification protocol by two PCR reactions

Huanming Yang, G. Tian, Yeyang Su, 2009, Science in China Series C: Life Sciences.

Omics-based Profiling of Carcinoma of the Breast and Matched Regional Lymph Node Metastasis

Jian Li, Lars Bolund, Heng Li, 2022 .

Molecular Profiles and Metastasis Markers in Chinese Patients with Gastric Carcinoma

Xiuqing Zhang, Chao Chen, Qiang Chen, 2019, Scientific Reports.

Comparison of Gene Expression and Genome-Wide DNA Methylation Profiling between Phenotypically Normal Cloned Pigs and Conventionally Bred Controls

Huanming Yang, Jun Wang, L. Bolund, 2011, PloS one.

DNA methylation in peripheral blood cells of pigs cloned by somatic cell nuclear transfer.

L. Bolund, Xiuqing Zhang, Shengting Li, 2011, Cellular reprogramming.

Systematic evaluation of a targeted gene capture sequencing panel for molecular diagnosis of retinitis pigmentosa

Asan, X. Yi, Xiuqing Zhang, 2018, PloS one.

Polymorphisms of DNA repair genes: ADPRT, XRCC1, and XPD and cancer risk in genetic epidemiology.

Huanming Yang, Xiuqing Zhang, Jun Jiang, 2009, Methods in molecular biology.

Whole Exome Sequencing Identifies Frequent Somatic Mutations in Cell-Cell Adhesion Genes in Chinese Patients with Lung Squamous Cell Carcinoma

Huanming Yang, Jun Wang, Mingbang Wang, 2015, Scientific Reports.

Circularization of genes and chromosome by CRISPR in human cells

G. Church, Huanming Yang, Jian Wang, 2018, bioRxiv.

Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies.

Shujia Huang, Jihua Sun, Li Wang, 2012, Journal of biotechnology.

Distinct biological ages of organs and systems identified from a multi-omics study.

Huanming Yang, Jian Wang, Xiuqing Zhang, 2022, Cell reports.

Building the sequence map of the human pan-genome

Lars Bolund, Ruiqiang Li, Xuan Zhu, 2010, Nature Biotechnology.

A microarray analysis of the rice transcriptome and its comparison to Arabidopsis.

Jian Wang, Lars Bolund, Ning Su, 2005, Genome research.

High quality bisulfite sequencing using nanogram amounts of genomic DNA

Wenwei Zhang, Xiuqing Zhang, Honglong Wu, 2013 .

Clustering of Cancer Cell Lines Using A Promoter- Targeted Liquid Hybridization Capture-Based Bisulfite Sequencing Approach

Huanming Yang, Xiuqing Zhang, Hui Jiang, 2015, Technology in cancer research & treatment.

Single-cell brain atlas of Parkinson's disease mouse model.

Xiuqing Zhang, Hongde Liu, Lihua Luo, 2021, Journal of genetics and genomics = Yi chuan xue bao.

Whole genome DNA methylation analysis based on high throughput sequencing technology.

Jun Wang, Ning Li, Xiuqing Zhang, 2010, Methods.

Multilayered molecular profiling supported the monoclonal origin of metastatic renal cell carcinoma

Huanming Yang, Zhiming Cai, Xueda Hu, 2014, International journal of cancer.

Consistent deregulation of gene expression between human and murine MLL rearrangement leukemias.

Huanming Yang, Jian Wang, S. Mi, 2009, Cancer research.

Clinical outcome of preimplantation genetic diagnosis and screening using next generation sequencing

Huanming Yang, L. Bolund, Xiuqing Zhang, 2014, GigaScience.

A Single Cell Level Based Method for Copy Number Variation Analysis by Low Coverage Massively Parallel Sequencing

Xun Xu, Fang Chen, Ping Hu, 2013, PloS one.

Single-cell sequencing analysis characterizes common and cell-lineage-specific mutations in a muscle-invasive bladder cancer

Huanming Yang, K. Kristiansen, Z. Cai, 2012, GigaScience.

DNA Copy Number Aberrations in Breast Cancer by Array Comparative Genomic Hybridization

Jian Li, Kai Wang, Carsten Wiuf, 2009, Genom. Proteom. Bioinform..

Single-cell transcriptome analysis of the heterogeneous effects of differential expression of tumor PD-L1 on responding TCR-T cells

Xiuqing Zhang, Linnan Zhu, Qumiao Xu, 2021, Theranostics.

Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach

M. Zhou, Xiuqing Zhang, A. Laurence, 2015, Clinical Epigenetics.

RNA-seq analysis of the hypothalamic transcriptome reveals the networks regulating physiopathological progress in the diabetic GK rat

Yu Zhang, Hongli Du, Huanhuan Jia, 2016, Scientific Reports.

Rapid detection of aneuploidies on a benchtop sequencing platform

Xiuqing Zhang, Hui Jiang, Wei Wang, 2013, Prenatal diagnosis.

IntroSpect: Motif-Guided Immunopeptidome Database Building Tool to Improve the Sensitivity of HLA I Binding Peptide Identification by Mass Spectrometry

Leo J. Lee, Bo Li, Xiuqing Zhang, 2022, Biomolecules.

IntroSpect: motif-guided immunopeptidome database building tool to improve the sensitivity of HLA binding peptide identification

Leo J. Lee, Bo Li, Xiuqing Zhang, 2021, bioRxiv.

Isolation and whole genome sequencing of fetal cells from maternal blood towards the ultimate non‐invasive prenatal testing

Lars Bolund, Wei Wang, Hui Jiang, 2017, Prenatal diagnosis.

Piglets born from vitrified cloned blastocysts produced with a simplified method of delipation and nuclear transfer.

Huanming Yang, L. Bolund, Xiuqing Zhang, 2007, Cloning and stem cells.

A Comprehensive Analysis of the T and B Lymphocytes Repertoire Shaped by HIV Vaccines

Huanming Yang, I-Ming Wang, Shiyu Wang, 2018, Front. Immunol..

Molecular profiles and mutation burden analysis in Chinese patients with gastric carcinoma

Xiuqing Zhang, Chao Chen, Qiang Chen, 2018, bioRxiv.

Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma

Xiuqing Zhang, L. Tang, Hui Jiang, 2016, Nature Communications.

Serial Analysis of Gene Expression Study of a Hybrid Rice Strain (LYP9) and Its Parental Cultivars1[w]

Jian Wang, Yu Zhang, Jun Yu, 2005, Plant Physiology.

A draft sequence of the rice (Oryza sativa ssp.indica) genome

Huanming Yang, Jian Wang, Jun Wang, 2001, Chinese Science Bulletin.

Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing

Jun Wang, Ruiqiang Li, Jun Li, 2013, BMC Genomics.

SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data

Jian Wang, Lin Fang, Yongsheng Chen, 2017, GigaScience.

Complete Resequencing of 40 Genomes Reveals Domestication Events and Genes in Silkworm (Bombyx)

Xun Xu, Ruiqiang Li, Cheng Lu, 2009, Science.

Detecting novel low-abundant transcripts in Drosophila.

Jian Wang, Huanming Yang, Charles Tseng, 2005, RNA.

Double restriction-enzyme digestion improves the coverage and accuracy of genome-wide CpG methylation profiling by reduced representation bisulfite sequencing

Xiuqing Zhang, Honglong Wu, Q. Tao, 2013, BMC Genomics.

A Short‐Read Multiplex Sequencing Method for Reliable, Cost‐Effective and High‐Throughput Genotyping in Large‐Scale Studies

Tao Liu, Wei Zhang, Ying Liu, 2013, Human mutation.

The sequence and de novo assembly of the giant panda genome

Dawei Li, Huanming Yang, Jian Wang, 2010, Nature.

Paired-End Sequencing of Long-Range DNA Fragments for De Novo Assembly of Large, Complex Mammalian Genomes by Direct Intra-Molecule Ligation

Asan, Jian Wang, Xiuqing Zhang, 2012, PloS one.

Adaptation to High Altitude Sequencing of 50 Human Exomes Reveals

Huanming Yang, K. Kristiansen, J. Qin, 2010 .

LDscaff: LD-based scaffolding of de novo genome assemblies

Xiuqing Zhang, Shuai Wang, Changfa Wang, 2020, BMC Bioinformatics.

Clinical application of massively parallel sequencing‐based prenatal noninvasive fetal trisomy test for trisomies 21 and 18 in 11 105 pregnancies with mixed risk factors

Jian Wang, Songgang Li, Xiuqing Zhang, 2012, Prenatal diagnosis.

Identification of somatic alterations in stage I lung adenocarcinomas by next‐generation sequencing

Xiuqing Zhang, Zhaoli Chen, Jiagen Li, 2014, Genes, chromosomes & cancer.

GNL-Scorer: a generalized model for predicting CRISPR on-target activity by machine learning and featurization

Lars Bolund, Xiuqing Zhang, Jun Wang, 2020, Journal of molecular cell biology.

BDdb: a comprehensive platform for exploration and utilization of birth defect multi-omics data

Xiuqing Zhang, Shoufang Qu, Fang Chen, 2020, bioRxiv.

Novel Y-chromosomal microdeletions associated with non-obstructive azoospermia uncovered by high throughput sequencing of sequence-tagged sites (STSs)

Huanming Yang, K. Kristiansen, Jun Wang, 2016, Scientific Reports.

complexity of the rice transcriptome Deep RNA sequencing at single base-pair resolution reveals high Material Supplemental

Huanming Yang, Jian Wang, K. Kristiansen, 2010 .

Cell free extrachromosomal circular DNA is common in human urine

Huanming Yang, L. Bolund, Xiuqing Zhang, 2021, bioRxiv.

The YH database: the first Asian diploid genome database

Jian Wang, Guoqing Li, Chao Song, 2008, Nucleic Acids Res..

A Comprehensive Survey of Genomic Alterations in Gastric Cancer Reveals Recurrent Neoantigens as Potential Therapeutic Targets

Xiuqing Zhang, Chao Chen, Qiang Chen, 2019, BioMed research international.

CONVERGE dataset: 12,000 whole-genome sequences representative of the Han Chinese population

Warren W. Kretzschmar, J. Marchini, Huanming Yang, 2016 .

HIVID: an efficient method to detect HBV integration using low coverage sequencing.

Xun Xu, Guan Wang, Hui Jiang, 2013, Genomics.

DNA Microarray Analysis of Genome Dynamics in Yersinia pestis: Insights into Bacterial Genome Microevolution and Niche Adaptation

Ruifu Yang, Xiuqing Zhang, J. Bao, 2004, Journal of bacteriology.

Non-invasive fetal sex determination by maternal plasma sequencing and application in X-linked disorder counseling

Yanyan Zhang, Xiuqing Zhang, Hui Jiang, 2014, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.

Embryo genome profiling by single-cell sequencing for preimplantation genetic diagnosis in a β-thalassemia family.

Xiuqing Zhang, Hui Jiang, Xun Xu, 2015, Clinical chemistry.

Single-cell RNA sequencing reveals dynamic changes in A-to-I RNA editome during early human embryogenesis

Huanming Yang, Xiuqing Zhang, Kui Wu, 2016, BMC Genomics.

Integrated analyses of DNA methylation and hydroxymethylation reveal tumor suppressive roles of ECM1, ATF5, and EOMES in human hepatocellular carcinoma

Xiuqing Zhang, Boping Zhou, Junwen Wang, 2014, Genome Biology.

A Comparison of Rice Chloroplast Genomes1[w]

Jian Wang, Songnian Hu, Wei Tong, 2004, Plant Physiology.

Impact of blood storage conditions on the transcript profile of plasma cell-free RNA

Xiuqing Zhang, Qing Zhou, Fang Chen, 2021, bioRxiv.

A Comprehensive Survey of Genomic Mutations in Breast Cancer Reveals Recurrent Neoantigens as Potential Therapeutic Targets

Xiuqing Zhang, Chao Chen, Songming Liu, 2020, bioRxiv.

CRISPR/Cas9-Mediated Gene Tagging: A Step-by-Step Protocol.

Xiuqing Zhang, Xi Xiang, Yonglun Luo, 2019, Methods in molecular biology.

High hydrostatic pressure treatment of porcine oocytes before handmade cloning improves developmental competence and cryosurvival.

Huanming Yang, L. Bolund, Xiuqing Zhang, 2008, Cloning and stem cells.

Author Correction: Pan-cancer analysis of whole genomes

Nuno A. Fonseca, Gary D Bader, Benjamin J. Raphael, 2023, Nature.

Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning

G. Church, Huanming Yang, J. Gorodkin, 2021, Nature Communications.

CNV-PG: a machine-learning framework for accurate copy number variation predicting and genotyping

Xiuqing Zhang, Wen-Jing Wang, Qing Zhou, 2020, bioRxiv.

A Genome Sequence of Novel SARS-CoV Isolates: the Genotype, GD-Ins29, Leads to a Hypothesis of Viral Transmission in South China

Dawei Li, Huanming Yang, Jian Wang, 2003, Genomics, Proteomics & Bioinformatics.

The index patient and samples

Huanming Yang, Jun Wang, Xiuqing Zhang, 2015 .

Prenatal Detection of Aneuploidy and Imbalanced Chromosomal Arrangements by Massively Parallel Sequencing

Hui Jiang, Fang Chen, Wei Wang, 2012, PloS one.

Tumor-selective replication herpes simplex virus-based technology significantly improves clinical detection and prognostication of viable circulating tumor cells

Jian Wang, X. Yi, Xiuqing Zhang, 2016, Oncotarget.

Alterations in the human gut microbiome associated with Helicobacter pylori infection

Huanming Yang, Huanzi Zhong, Xiuqing Zhang, 2019, FEBS open bio.

Haplotyping by CRISPR-mediated DNA circularization (CRISPR-hapC) broadens allele-specific gene editing

Huanming Yang, L. Bolund, Xiuqing Zhang, 2020, Nucleic acids research.

Fecal microbiota transplantation results in bacterial strain displacement in patients with inflammatory bowel diseases

Huijue Jia, Zhuye Jie, Huanming Yang, 2019, FEBS open bio.

A legacy of the "1% program" - The "Chinese Chapter" of the human genome reference sequence.

Xiuqing Zhang, Zhi Xia, Wei Dong, 2018, Journal of genetics and genomics = Yi chuan xue bao.

New genetic variants associated with major adverse cardiovascular events in patients with acute coronary syndromes and treated with clopidogrel and aspirin

Huijue Jia, Huanming Yang, Jian Wang, 2018, The Pharmacogenomics Journal.

Bacterial strain displacement in inflammatory bowel diseases after fecal microbiota transplantation

Huijue Jia, Zhuye Jie, Huanming Yang, 2018, bioRxiv.

Fecal microbiota transplantation brings about bacterial strain displacement in patients with inflammatory bowel diseases

Huijue Jia, Zhuye Jie, Huanming Yang, 2018 .

Fecal microbiota transplantation brings about bacterial strain 1 displacement in patients with inflammatory bowel diseases 2

Huijue Jia, Zhuye Jie, Huanming Yang, 2019 .

Gene pathogenicity prediction of Mendelian diseases via the random forest algorithm

Xiuqing Zhang, Sijie He, Shengting Li, 2019, bioRxiv.

Molecular Signatures of M ajor Depression

J. Marchini, Wei Zhang, Huanming Yang, 2015 .

Responding kinetic of B-cell receptor repertoire to the Toll-like receptor 7/8 stimulation in non-human primates

Yonggang Zhu, Xiuqing Zhang, Xiao Liu, 2021, bioRxiv.

Selection of potential cytokeratin-18 monoclonal antibodies following IGH repertoire evaluation in mice.

Xiuqing Zhang, Xiao Liu, Wei Zhang, 2019, Journal of immunological methods.

Differential Expression of Plasma Exo-miRNA in Neurodegenerative Diseases by Next-Generation Sequencing

Xiuqing Zhang, C. Nie, Hefu Zhen, 2020, Frontiers in Neuroscience.

Novel target capture DNA library preparation method using CircLigase-mediated hook ligation.

Xiuqing Zhang, Jiang Yuan, Ao Chen, 2020, New biotechnology.

Comparison of double-stranded and single-stranded cfDNA library construction methods for targeted genome and methylation sequencing

Xiuqing Zhang, Jianchao Zheng, Shida Zhu, 2022 .

A novel splice donor site mutation in EPHA2 caused congenital cataract in a Chinese family

Xiuqing Zhang, Sijie He, Lejin Wang, 2016, Indian journal of ophthalmology.

A human gut microbial gene catalogue established by metagenomic sequencing

P. Bork, Junhua Li, Huanming Yang, 2010, Nature.

Archaeology Augments Tibet's Genetic History--Response

Asan, Huanming Yang, Jian Wang, 2010 .

The stepwise evolution of the exome during acquisition of docetaxel resistance in breast cancer cells

R. L. Nielsen, Huanming Yang, J. Stenvang, 2016, BMC Genomics.

LFMD: detecting low-frequency mutations in high-depth genome sequencing data without molecular tags

Xun Xu, Xiuqing Zhang, Rui Ye, 2019, bioRxiv.

Erratum: Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma

Xiuqing Zhang, L. Tang, Hui Jiang, 2016, Nature Communications.

Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells

Huanming Yang, Jian Wang, K. Kristiansen, 2015, GigaScience.

Structural modulation of gut microbiota reveals Coix seed contributes to weight loss in mice

Xiuqing Zhang, Fei Li, Shengyi Liu, 2019, Applied Microbiology and Biotechnology.

CNV-P: a machine-learning framework for predicting high confident copy number variations

Xiuqing Zhang, Qing Zhou, Wen-jing Wang, 2021, PeerJ.

Non-invasive prenatal assessment of trisomy 21 by multiplexed maternal plasma DNA sequencing: large scale validity study

Yama W. L. Zheng, Xiuqing Zhang, K. Nicolaides, 2011, BMJ : British Medical Journal.

Noninvasive Fetal Trisomy (NIFTY) test: an advanced noninvasive prenatal diagnosis methodology for fetal autosomal and sex chromosomal aneuploidies

Wei-Mou Zheng, Songgang Li, Xiuqing Zhang, 2012, BMC medical genomics.

Germline-Encoded TCR-MHC Contacts Promote TCR V Gene Bias in Umbilical Cord Blood T Cell Repertoire

Xiuqing Zhang, Xiao Liu, Jinghua Wu, 2019, bioRxiv.

Characterization of Exogenous Sequence Fragments in Extracellular Vesicles from Human

Xiuqing Zhang, A. Guo, Qiong Zhang, 2023, Small Structures.

LION: a simple and rapid method to achieve CRISPR gene editing

L. Bolund, Xiuqing Zhang, Xi Xiang, 2019, Cellular and Molecular Life Sciences.

The sequence and de novo assembly of the giant panda genome

Dawei Li, Huanming Yang, Jian Wang, 2010, Nature.

A human gut microbial gene catalogue established by metagenomic sequencing

P. Bork, Junhua Li, Huanming Yang, 2010, Nature.

Rift Valley Fever Virus and Yellow Fever Virus in Urine: A Potential Source of Infection

Xiuqing Zhang, Y. Bi, Jinmin Ma, 2019, Virologica Sinica.

An improved method for genome wide DNA methylation profiling correlated to transcription and genomic instability in two breast cancer cell lines

Huanming Yang, G. Tian, Ning Li, 2009, BMC Genomics.

Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing

Ruiqiang Li, Dong Li, Xiuqing Zhang, 2013, BMC Genomics.

Omics‐based profiling of carcinoma of the breast and matched regional lymph node metastasis

Huanming Yang, L. Bolund, Xiuqing Zhang, 2008, Proteomics.

CRISPR-GNL: an improved model for predicting CRISPR activity by machine learning and featurization

Xiuqing Zhang, Jun Wang, Xi Xiang, 2019, bioRxiv.

Genomic organization, transcript variants and comparative analysis of the human nucleoporin 155 (NUP155) gene.

Huanming Yang, Jian Wang, L. Bolund, 2002, Gene.

Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies.

Xiuqing Zhang, Honglong Wu, Ning Li, 2012, Journal of biotechnology.