J. Hernandez-Ortiz

发表

Pair collisions of fluid-filled elastic capsules in shear flow: Effects of membrane properties and polymer additives

M. Graham, P. Pranay, Samartha G. Anekal, 2010 .

Hydrodynamic effects on the translocation rate of a polymer through a pore.

J. Hernandez-Ortiz, J. D. de Pablo, Manan Chopra, 2009, The Journal of chemical physics.

Transport and collective dynamics in suspensions of confined swimming particles.

M. Graham, J. Hernandez-Ortiz, C. Stoltz, 2005, Physical review letters.

Diffusion and spatial correlations in suspensions of swimming particles.

Patrick T. Underhill, M. Graham, J. Hernandez-Ortiz, 2008, Physical review letters.

A NOVEL APPROACH FOR ELECTROKINETIC PHENOMENA IN SOFT MATTER

J. Hernandez-Ortiz, 2012 .

Leveling of Polymer Grating Structures upon Heating: Dimension Dependence on the Nanoscale and the Effect of Antiplasticizers.

J. Hernandez-Ortiz, P. Nealey, Daniel A. Olaya-Muñoz, 2018, ACS applied materials & interfaces.

Presentation of large DNA molecules for analysis as nanoconfined dumbbells.

Juan J de Pablo, Theo Odijk, David C Schwartz, 2013, Macromolecules.

Computational immuno-biology for organ transplantation and regenerative medicine.

J. Hernandez-Ortiz, J. S. Danobeitia, L. Fernandez, 2016, Transplantation reviews.

Theoretical voltammetric response of electrodes coated by solid polymer electrolyte membranes.

J. Hernandez-Ortiz, A. M. Gómez-Marín, 2014, Analytica chimica acta.

Educating local radial basis functions using the highest gradient of interest in three dimensional geometries

J. Hernandez-Ortiz, Viviana Palacio-Betancur, S. Villada-Gil, 2017 .

Self-consistent description of electrokinetic phenomena in particle-based simulations.

J. Hernandez-Ortiz, J. D. de Pablo, 2015, The Journal of chemical physics.

Structure and dynamics of hydrodynamically interacting finite-size Brownian particles in a spherical cavity: Spheres and cylinders.

J. Hernandez-Ortiz, O. Heinonen, J. D. de Pablo, 2020, The Journal of chemical physics.

Parallel O(N) Stokes' solver towards scalable Brownian dynamics of hydrodynamically interacting objects in general geometries.

Barry F. Smith, J. Hernandez-Ortiz, O. Heinonen, 2017, The Journal of chemical physics.

Phosphorus recovery from high concentrations of low-grade phosphate rocks using the biogenic acid produced by the acidophilic bacteria Acidithiobacillus thiooxidans

J. Hernandez-Ortiz, Susana M. Calle-Castañeda, Marco A. Márquez-Godoy, 2018 .

Solubilization of phosphorus from phosphate rocks with Acidithiobacillus thiooxidans following a growing-then-recovery process

J. Hernandez-Ortiz, Susana M. Calle-Castañeda, Marco A. Márquez-Godoy, 2017, World journal of microbiology & biotechnology.

Liquid crystal mediated interactions between nanoparticles in a nematic phase.

J. Hernandez-Ortiz, N. Abbott, J. D. de Pablo, 2012, Langmuir : the ACS journal of surfaces and colloids.

Electrostatic confinement and manipulation of DNA molecules for genome analysis

D. Schwartz, J. Hernandez-Ortiz, S. Zhou, 2017, Proceedings of the National Academy of Sciences.

Cuboidal liquid crystal phases under multiaxial geometrical frustration.

J. Hernandez-Ortiz, N. Abbott, J. D. de Pablo, 2020, Soft matter.

Trench field-effect transistors integrated in a microfluidic channel and design considerations for charge detection.

D. Schwartz, J. Hernandez-Ortiz, Z. Ma, 2022, Applied physics letters.

Phase transformations in air plasma-sprayed yttria-stabilized zirconia thermal barrier coatings

Julian D. Osorio, J. Hernandez-Ortiz, A. Toro, 2014 .

Numerical simulation to assess the elastic-strain energy distribution in a silicon rubber disk subjected to a punch shear test (PST)

J. Hernandez-Ortiz, Adrián Lopera-Valle, F. A. Suárez-Bustamante, 2016 .

The SARS-CoV-2 B.1.1.529 Omicron virus causes attenuated infection and disease in mice and hamsters

Larissa B. Thackray, Thomas P. Fabrizio, J. Hernandez-Ortiz, 2021, Research square.

A simple dialysis device for large DNA molecules.

D. Schwartz, J. Hernandez-Ortiz, Samuel J W Krerowicz, 2019, BioTechniques.

SARS-CoV-2 Omicron virus causes attenuated disease in mice and hamsters

Larissa B. Thackray, Thomas P. Fabrizio, J. Hernandez-Ortiz, 2022, Nature.

Liquid Crystal Enabled Early Stage Detection of Beta Amyloid Formation on Lipid Monolayers

J. Hernandez-Ortiz, N. Abbott, J. D. de Pablo, 2015 .

Seroprevalence of anti-SARS-CoV-2 antibodies in Colombia, 2020: A population-based study

J. Hernandez-Ortiz, Z. Cucunubá, I. Rodríguez-Barraquer, 2021, The Lancet Regional Health - Americas.

Analyses Based on Analytical Solutions

J. Hernandez-Ortiz, T. Osswald, 2006 .

Oropouche virus as an emerging cause of acute febrile illness in Colombia

J. Hernandez-Ortiz, J. Osorio, G. Cloherty, 2022, Emerging microbes & infections.

An O(N) and parallel approach to integral problems by a kernel-independent fast multipole method: Application to polarization and magnetization of interacting particles

Jian Qin, Xujun Zhao, Olle Heinonen, 2016, 1605.01715.

Fluctuations and phase transitions of uniaxial and biaxial liquid crystals using a theoretically informed Monte Carlo and a Landau free energy density

J. Hernandez-Ortiz, J. D. de Pablo, Viviana Palacio-Betancur, 2019, Journal of physics. Condensed matter : an Institute of Physics journal.

Diffusion–reaction of aluminum and oxygen in thermally grown Al2O3 oxide layers

J. C. Hernández, Julian D. Osorio, J. Hernandez-Ortiz, 2013, Heat and Mass Transfer.

Directed Self-Assembly of Colloidal Particles onto Nematic Liquid Crystalline Defects Engineered by Chemically Patterned Surfaces.

J. Hernandez-Ortiz, P. Nealey, J. D. de Pablo, 2017, ACS nano.

Microstructure characterization of thermal barrier coating systems after controlled exposure to a high temperature

Julian D. Osorio, Alejandro Toro, Juan P. Hernández-Ortiz, 2014 .

Solubilization of phosphorus from phosphate rocks with Acidithiobacillus thiooxidans following a growing-then-recovery process

J. Hernandez-Ortiz, Susana M. Calle-Castañeda, Marco A. Márquez-Godoy, 2017, World Journal of Microbiology and Biotechnology.

Radial Functions Method

J. Hernandez-Ortiz, T. Osswald, 2006 .

Boundary Integral Equations for Viscous Flows - non-Newtonian Behavior and Solid Inclusions

J. Hernandez-Ortiz, 2004 .

Correlations Between Microstructure and Mechanical Properties of Air Plasma‐Sprayed Thermal Barrier Coatings Exposed to a High Temperature

Freddy Jiménez, Julian D. Osorio, Alejandro Toro, 2013 .

Ion effects at electrode/solid polymer electrolyte membrane interfaces.

J. Hernandez-Ortiz, A. M. Gómez-Marín, 2014, Physical chemistry chemical physics : PCCP.

Modeling processing of silicone rubber: Liquid versus hard silicone rubbers

J. Hernandez-Ortiz, T. Osswald, 2011 .

THERMAL BARRIER COATINGS FOR GAS TURBINE APPLICATIONS: FAILURE MECHANISMS AND KEY MICROSTRUCTURAL FEATURES

Julian D. Osorio, Alejandro Toro, Juan P. Hernández-Ortiz, 2012 .

Morphological transitions in liquid crystal nanodroplets

J. Hernandez-Ortiz, N. Abbott, J. Pablo, 2012 .

Effect of poly(ethylene oxide) homopolymer and two different poly(ethylene oxide-b-poly(propylene oxide)-b-poly(ethylene oxide) triblock copolymers on morphological, optical, and mechanical properties of nanostructured unsaturated polyester.

J. Hernandez-Ortiz, I. Mondragon, A. Tercjak, 2014, ACS applied materials & interfaces.

Method for time–temperature–transformation diagrams using DSC data: Linseed aliphatic epoxy resin

J. Hernandez-Ortiz, T. Osswald, Nora Catalina Restrepo-Zapata, 2014 .

Vulcanization of EPDM rubber compounds with and without blowing agents: Identification of reaction events and TTT‐diagram using DSC data

J. Hernandez-Ortiz, T. Osswald, Nora Catalina Restrepo-Zapata, 2015 .

Fast computation of many-particle hydrodynamic and electrostatic interactions in a confined geometry.

Juan J de Pablo, M. Graham, J. Hernandez-Ortiz, 2007, Physical review letters.

N log N method for hydrodynamic interactions of confined polymer systems: Brownian dynamics.

Juan J de Pablo, M. Graham, J. Hernandez-Ortiz, 2006, The Journal of chemical physics.

NANOSTRUCTURED UNSATURATED POLYESTER USING BLOCK COPOLYMERS: MORPHOLOGY, OPTICAL PROPERTIES AND FRACTURE TOUGHNESS RELATIONSHIP

J. Hernandez-Ortiz, I. Mondragon, A. Tercjak, 2014 .

Prolate and oblate chiral liquid crystal spheroids

Juan J. de Pablo, Jose A. Martinez-Gonzalez, Nicholas L. Abbott, 2020, Science Advances.

SARS-CoV-2 Vaccinated Breakthrough Infections With Fatal and Critical Outcomes in the Department of Antioquia, Colombia

J. Hernandez-Ortiz, J. Osorio, G. Cloherty, 2022 .

Dog Savior: Immediate Scent-Detection of SARS-COV-2 by Trained Dogs

Andrés F. Valencia, J. Hernandez-Ortiz, J. Osorio, 2020, bioRxiv.

Liquid crystal nanodroplets, and the balance between bulk and interfacial interactions

J. Hernandez-Ortiz, J. Pablo, E. Díaz‐Herrera, 2012 .

Flow induced deformation of defects around nanoparticles and nanodroplets suspended in liquid crystals

Gary M. Koenig, J. Hernandez-Ortiz, N. Abbott, 2010 .

Controlled deformation of vesicles by flexible structured media

J. Hernandez-Ortiz, N. Abbott, J. D. de Pablo, 2016, Science Advances.

Liquid-crystal-mediated self-assembly at nanodroplet interfaces

J. Hernandez-Ortiz, N. Abbott, J. Pablo, 2012, Nature.

A clone-free, single molecule map of the domestic cow (Bos taurus) genome

David C. Schwartz, Steve Goldstein, Shiguo Zhou, 2015, BMC Genomics.

Part III: Numerical Techniques: Introduction to Numerical Analysis

J. Hernandez-Ortiz, T. Osswald, 2006 .

A Novel Cure Reaction Model Fitting Technique Based on DSC Scans

J. Hernandez-Ortiz, T. Osswald, 2005 .

Modeling the Vulcanization Reaction of Silicone Rubber

J. Hernandez-Ortiz, T. Osswald, L. Lopez, 2007 .

Cross-stream-line migration in confined flowing polymer solutions: Theory and simulation

M. Graham, J. Hernandez-Ortiz, J. Pablo, 2006 .

Use of oral fluids for efficient monitoring of influenza viruses in swine herds in Colombia

J. Hernandez-Ortiz, J. Osorio, Karl A. Ciuoderis, 2021, Revista Colombiana de Ciencias Pecuarias.

Modeling flows of confined nematic liquid crystals.

J. Hernandez-Ortiz, J. D. de Pablo, Brian T. Gettelfinger, 2011, The Journal of chemical physics.

Dipole-induced self-assembly of helical beta-peptides.

Clark A. Miller, J. Hernandez-Ortiz, N. Abbott, 2008, The Journal of chemical physics.

Part I: Background: Polymer Materials Science

Tim A. Osswald, Juan P. Hernández-Ortiz, J. Hernandez-Ortiz, 2006 .

Highly sensitive scent-detection of COVID-19 patients in vivo by trained dogs

J. Hernandez-Ortiz, J. Osorio, O. Vesga, 2021, medRxiv.

Langmuir–Hinshelwood Mechanism Including Lateral Interactions and Species Diffusion for CO Electro-Oxidation on Metallic Surfaces

Juan P. Hernández-Ortiz, J. Hernandez-Ortiz, Ana M. Gómez-Marín, 2014 .

Mean Field Approximation of Langmuir–Hinshelwood CO–Surface Reactions Considering Lateral Interactions

J. Hernandez-Ortiz, A. M. Gómez-Marín, 2013 .

Sharp Morphological Transitions from Nanoscale Mixed-Anchoring Patterns in Confined Nematic Liquid Crystals.

J. Hernandez-Ortiz, P. Nealey, J. D. de Pablo, 2017, Langmuir.

Directed self-assembly of nematic liquid crystals on chemically patterned surfaces: morphological states and transitions.

Juan J de Pablo, Paul F Nealey, J. Hernandez-Ortiz, 2016, Soft matter.

Liquid crystal free energy relaxation by a theoretically informed Monte Carlo method using a finite element quadrature approach.

J. Hernandez-Ortiz, J. D. de Pablo, J. C. Armas-Pérez, 2015, The Journal of chemical physics.

Theoretically informed Monte Carlo simulation of liquid crystals by sampling of alignment-tensor fields.

J. Hernandez-Ortiz, J. D. de Pablo, O. Guzmán, 2015, The Journal of chemical physics.

Boundary Element Method

J. Hernandez-Ortiz, T. Osswald, 2006 .

Polymer Processing: Modeling and Simulation

Tim A. Osswald, Juan P. Hernández-Ortiz, J. Hernandez-Ortiz, 2006 .

Mechanism of fiber–matrix separation in ribbed compression molded parts†

J. Hernandez-Ortiz, T. Osswald, Alejandro Londoño-Hurtado, 2007 .

Molecular surveillance detects high prevalence of the neglected parasite Mansonella ozzardi in the Colombian Amazon

J. Hernandez-Ortiz, Z. Li, J. Osorio, 2023, medRxiv.

Grain polydispersity and coherent crystal reorientations are features to foster stress hotspots in polycrystalline alloys under load

J. Hernandez-Ortiz, A. Ramírez-Hernández, A. Toro, 2021, Science Advances.

Directing the far-from-equilibrium assembly of nanoparticles in confined liquid crystals by hydrodynamic fields.

J. Hernandez-Ortiz, J. D. de Pablo, Viviana Palacio-Betancur, 2021, Soft matter.

Dynamics of confined suspensions of swimming particles

Patrick T. Underhill, M. Graham, J. Hernandez-Ortiz, 2008, Journal of physics. Condensed matter : an Institute of Physics journal.

Concentration distributions during flow of confined flowing polymer solutions at finite concentration: slit and grooved channel

M. Graham, J. Hernandez-Ortiz, J. Pablo, 2008 .

The Principles of SARS-CoV-2 Intervariant Competition Are Exemplified in the Pre-Omicron Era of the Colombian Epidemic

J. Hernandez-Ortiz, G. Baele, J. Osorio, 2023, Microbiology spectrum.

Mesoscale martensitic transformation in single crystals of topological defects

Paul F. Nealey, Juan J. de Pablo, Juan P. Hernández-Ortiz, 2017, Proceedings of the National Academy of Sciences.

Continuous Equipment Simulation – Mixing Devices

J. Hernandez-Ortiz, T. Osswald, Alejandro Londoño-Hurtado, 2009 .

Shape induced segregation and anomalous particle transport under spherical confinement

J. Hernandez-Ortiz, H. Jaeger, J. D. de Pablo, 2020, 2002.01880.

Active fluid with Acidithiobacillus ferrooxidans: correlations between swimming and the oxidation route

J. Hernandez-Ortiz, Liliam C. Agudelo-Morimitsu, M. A. Márquez-Godoy, 2019, Journal of Biological Physics.

Prolate and oblate chiral liquid crystal spheroids.

J. Hernandez-Ortiz, N. Abbott, J. D. de Pablo, 2020, Science Advances.

Homeotropic nano-particle assembly on degenerate planar nematic interfaces: films and droplets.

J. Hernandez-Ortiz, J. D. de Pablo, J. C. Armas-Pérez, 2015, Soft matter.

Diffusion–reaction of aluminum and oxygen in thermally grown Al2O3 oxide layers

J. C. Hernández, Julian D. Osorio, J. Hernandez-Ortiz, 2014 .

Modeling the behavior of fiber suspensions in the molding of polymer composites

J. Hernandez-Ortiz, T. Osswald, Alejandro Londoño-Hurtado, 2011 .

A clone-free, single molecule map of the domestic cow (Bos taurus) genome

Diego Alberto Patiño Cortes, D. Schwartz, J. Hernandez-Ortiz, 2015, BMC Genomics.

Structure and proton conduction in sulfonated poly(ether ether ketone) semi-permeable membranes: a multi-scale computational approach.

J. Hernandez-Ortiz, J. D. de Pablo, Jarol Molina, 2019, Physical chemistry chemical physics : PCCP.

Chemorheological time‐temperature‐transformation‐viscosity diagram: Foamed EPDM rubber compound

J. Hernandez-Ortiz, T. Osswald, Nora Catalina Restrepo-Zapata, 2016 .

Microscale Objects via Restructuring of Large, Double-Stranded DNA Molecules.

J. Hernandez-Ortiz, Samuel J W Krerowicz, David C Schwartz, 2018, ACS applied materials & interfaces.

Boundary Element Method

W. S. Hall, W. S. Hall, J. Hernandez-Ortiz, 2006 .

Homeotropic nano-particle assembly on degenerate planar nematic interfaces: films and droplets.

J. Hernandez-Ortiz, J. D. de Pablo, J. C. Armas-Pérez, 2015, Soft matter.

Directed Self-Assembly of Colloidal Particles onto Nematic Liquid Crystalline Defects Engineered by Chemically Patterned Surfaces.

J. Hernandez-Ortiz, P. Nealey, J. D. de Pablo, 2017, ACS nano.

Part II: Processing Fundamentals: Dimensional Analysis and Scaling

J. Hernandez-Ortiz, T. Osswald, 2006 .

Towards a machine learning-based approach to forecasting Dengue virus outbreaks in Colombian cities: a case-study: Medellin, Antioquia

Alberto M. Ceballos-Arroyo, Daniel Maldonado-Perez, Hugo Mesa-Yepes, 2020, Symposium on Medical Information Processing and Analysis.

Genomic diversity and evolutionary dynamics of Influenza A viruses in Colombian swine: implications for one health surveillance and control

J. Hernandez-Ortiz, Andrés Cardona, K. Ciuoderis, 2024, Emerging microbes & infections.

Development of Materials for Naval, Fluvial and Military Applications

J. Hernandez-Ortiz, A. Valencia, F. A. S. Bustamante, 2018 .

Seroprevalence of anti-SARS-CoV-2 antibodies in Colombia, 2020: A population-based study

J. Hernandez-Ortiz, Z. Cucunubá, I. Rodríguez-Barraquer, 2022, The Lancet Regional Health - Americas.

Urticaria after breakthrough Omicron BA.5.1 severe acute respiratory syndrome coronavirus 2 infection in a triple-vaccinated (Pfizer) patient: a case report

J. Hernandez-Ortiz, J. Osorio, G. Cloherty, 2023, Journal of Medical Case Reports.