B. André

发表

Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

J. Collado-Vides, J. van Helden, B. André, 1998, Journal of molecular biology.

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

Ronald W. Davis, J. Hegemann, P. Philippsen, 1999, Science.

Functional profiling of the Saccharomyces cerevisiae genome

Ronald W. Davis, J. Hegemann, P. Philippsen, 2002, Nature.

Complete DNA sequence of yeast chromosome II.

M. Aigle, N. Biteau, H. Feldmann, 1994, The EMBO journal.

Complete DNA sequence of yeast chromosome XI

C. Sensen, B. Dujon, S. Oliver, 1994, Nature.

A genomic view of yeast membrane transporters.

B. André, D. V. Belle, D. van Belle, 2001, Current opinion in cell biology.

Substrate-Induced Ubiquitylation and Endocytosis of Yeast Amino Acid Permeases

B. André, M. Prévost, Eva-Maria Krammer, 2014, Molecular and Cellular Biology.

Transition of yeast Can1 transporter to the inward-facing state unveils an α-arrestin target sequence promoting its ubiquitylation and endocytosis

B. André, M. Prévost, Eva-Maria Krammer, 2017, Molecular biology of the cell.

Conformation-dependent partitioning of yeast nutrient transporters into starvation-protective membrane domains

B. André, L. Twyffels, Christos Gournas, 2018, Proceedings of the National Academy of Sciences.

K+ channel interactions detected by a genetic system optimized for systematic studies of membrane protein interactions.

B. André, W. Frommer, J. Revuelta, 2004, Proceedings of the National Academy of Sciences of the United States of America.

A web site for the computational analysis of yeast regulatory sequences

J. Collado-Vides, J. van Helden, B. André, 2000, Yeast.

Gzf3p, a fourth GATA factor involved in nitrogen‐regulated transcription in Saccharomyces cerevisiae

J. Jauniaux, B. André, S. Vissers, 1997, Molecular microbiology.

Cloning and expression of the UGA4 gene coding for the inducible GABA-specific transport protein of Saccharomyces cerevisiae

M. Grenson, J. Jauniaux, B. André, 1993, Molecular and General Genetics MGG.

The external amino acid signaling pathway promotes activation of Stp1 and Uga35/Dal81 transcription factors for induction of the AGP1 gene in Saccharomyces cerevisiae.

B. André, I. Iraqui, A. Urrestarazu, 2004, Genetics.

Unraveling networks of co-regulated genes on the sole basis of genome sequences

Sylvain Brohée, Gilles Vanderstocken, Bruno André, 2011, Nucleic acids research.

Unveiling the Mechanism of Arginine Transport through AdiC with Molecular Dynamics Simulations: The Guiding Role of Aromatic Residues

B. André, M. Prévost, Eva-Maria Krammer, 2016, PloS one.

Nitrogen-regulated ubiquitination of the Gap1 permease of Saccharomyces cerevisiae.

B. André, J. Springael, 1998, Molecular biology of the cell.

The pleiotropic UGA35(DURL) regulatory gene of Saccharomyces cerevisiae: cloning, sequence and identity with the DAL81 gene.

B. André, S. Vissers, D. Coornaert, 1991, Gene.

Stress Conditions Promote Yeast Gap1 Permease Ubiquitylation and Down-regulation via the Arrestin-like Bul and Aly Proteins*

B. André, Ahmad Merhi, Myriam Crapeau, 2014, The Journal of Biological Chemistry.

The ubiquitin code of yeast permease trafficking.

B. André, R. Haguenauer‐Tsapis, Z. Erpapazoglou, 2010, Trends in cell biology.

Ubiquitin Is Required for Sorting to the Vacuole of the Yeast General Amino Acid Permease, Gap1*

B. André, O. Soetens, J. de Craene, 2001, The Journal of Biological Chemistry.

The yeast Npi1/Rsp5 ubiquitin ligase lacking its N-terminal C2 domain is competent for ubiquitination but not for subsequent endocytosis of the gap1 permease.

B. André, J. Springael, J. de Craene, 1999, Biochemical and biophysical research communications.

A co‐activator of nitrogen‐regulated transcription in Saccharomyces cerevisiae

B. André, S. Soussi-Boudekou, Saïd Soussi‐Boudekou, 1999, Molecular microbiology.

A New Family of High-Affinity Transporters for Adenine, Cytosine, and Purine Derivatives in Arabidopsis

B. André, W. Frommer, B. Gillissen, 2000, Plant Cell.

A C‐terminal di‐leucine motif and nearby sequences are required for NH4+‐induced inactivation and degradation of the general amino acid permease, Gap1p, of Saccharomyces cerevisiae

B. André, C. Hein, 1997, Molecular microbiology.

The Npr1 Kinase Controls Biosynthetic and Endocytic Sorting of the Yeast Gap1 Permease*

B. André, O. Soetens, J. de Craene, 2001, The Journal of Biological Chemistry.

The human Rhesus-associated RhAG protein and a kidney homologue promote ammonium transport in yeast

B. André, G. Matassi, J. Cartron, 2000, Nature Genetics.

Amino Acid Signaling in Yeast: Activation of Ssy5 Protease Is Associated with Its Phosphorylation-induced Ubiquitylation*

B. André, S. Vissers, Ahmad Merhi, 2011, The Journal of Biological Chemistry.

K63-linked ubiquitin chains as a specific signal for protein sorting into the multivesicular body pathway

B. André, C. Jacob, Elsa Lauwers, 2009, The Journal of cell biology.

Molecular characterization of two ammonium transporters from the ectomycorrhizal fungus Hebeloma cylindrosporum

B. André, M. Chalot, A. Javelle, 2001, FEBS letters.

Heptahelical protein PQLC2 is a lysosomal cationic amino acid exporter underlying the action of cysteamine in cystinosis therapy

B. André, A. Chabli, B. Chadefaux-Vekemans, 2012, Proceedings of the National Academy of Sciences.

Evidence for a Direct Role of the Doa4 Deubiquitinating Enzyme in Protein Sorting into the MVB Pathway

B. André, E. Nikko, 2007, Traffic.

Dictyostelium discoideum contains a family of calmodulin‐related EF‐hand proteins that are developmentally regulated

B. André, A. Noegel, M. Schleicher, 1996, FEBS letters.

Molecular characterization, function and regulation of ammonium transporters (Amt) and ammonium‐metabolizing enzymes (GS, NADP‐GDH) in the ectomycorrhizal fungus Hebeloma cylindrosporum

B. André, M. Chalot, A. Javelle, 2003, Molecular microbiology.

WWP, a new amino acid motif present in single or multiple copies in various proteins including dystrophin and the SH3-binding Yes-associated protein YAP65.

B. André, J. Springael, Bruno André, 1994, Biochemical and biophysical research communications.

A plant plasma-membrane H+-ATPase promotes yeast TORC1 activation via its carboxy-terminal tail

B. André, Elie Saliba, C. Primo, 2021, Scientific reports.

FTY720-induced endocytosis of yeast and human amino acid transporters is preceded by reduction of their inherent activity and TORC1 inhibition

B. André, L. Twyffels, C. Barthelemy, 2017, Scientific Reports.

From yeast ammonium transporters to Rhesus proteins, isolation and functional characterization.

B. André, M. Boeckstaens, A. Marini, 2006, Transfusion clinique et biologique : journal de la Societe francaise de transfusion sanguine.

High-affinity ammonium transporters and nitrogen sensing in mycorrhizas.

B. André, M. Chalot, A. Javelle, 2003, Trends in microbiology.

The yeast H +-ATPase Pma 1 promotes Rag / Gtr-dependent TORC 1 1 activation in response to H +-coupled nutrient uptake 2 3

B. André, Minoas Evangelinos, Christos Gournas, 2018 .

Yeast Npi3/Bro1 is involved in ubiquitin‐dependent control of permease trafficking

Bruno André, B. André, J. Springael, 2002, FEBS letters.

and trans-acting elements determining induction of the genes of the y-aminobutyrate (GABA) utilization pathway in Saccharomyces cerevisiae

M. Grenson, B. André, D. Talibi, 2022 .

Ubiquitin and the SCFGrr1 ubiquitin ligase complex are involved in the signalling pathway activated by external amino acids in Saccharomyces cerevisiae

B. André, F. Bernard, Florent Bernard, 2001, FEBS letters.

Uptake of exogenous serine is important to maintain sphingolipid homeostasis in Saccharomyces cerevisiae

Christer S. Ejsing, B. André, J. Heinisch, 2020, bioRxiv.

The AP-3 adaptor complex mediates sorting of yeast and mammalian PQ-loop-family basic amino acid transporters to the vacuolar/lysosomal membrane

B. André, A. O. Barry, Elisa Llinares, 2015, Scientific Reports.

Systematic Mutational Analysis of the Intracellular Regions of Yeast Gap1 Permease

B. André, M. Prévost, Ahmad Merhi, 2011, PloS one.

Short title: Nitrogen-coordinated arginine transport at the vacuolar membrane Gene nomenclature: Vacuolar Storage of Basic amino acids: VSB1

B. André, A. DeLuna, I. Georis, 2020 .

B. André, A. Marini, S. Vissers, 1997 .

Amino Acid Signaling in Saccharomyces cerevisiae: a Permease-Like Sensor of External Amino Acids and F-Box Protein Grr1p Are Required for Transcriptional Induction of the AGP1 Gene, Which Encodes a Broad-Specificity Amino Acid Permease

B. André, E. Boles, S. Vissers, 1999, Molecular and Cellular Biology.

Nucleotide sequence of the DURM gene coding for a positive regulator of allophanate-inducible genes in Saccharomyces cerevisiae.

J. Jauniaux, B. André, 1990, Nucleic acids research.

Amino acid transport in plants

B. André, W. Frommer, M. Tegeder, 1998 .

Cis- and trans-acting elements determining induction of the genes of the gamma-aminobutyrate (GABA) utilization pathway in Saccharomyces cerevisiae.

M. Grenson, B. André, D. Talibi, 1995, Nucleic acids research.

Two mutually exclusive regulatory systems inhibit UASGATA, a cluster of 5'-GAT(A/T)A-3' upstream from the UGA4 gene of Saccharomyces cerevisiae.

B. André, S. Vissers, C. Hein, 1995, Nucleic acids research.

Tribute to Marcelle Grenson (1925–1996), A Pioneer in the Study of Amino Acid Transport in Yeast

B. André, 2018, International journal of molecular sciences.

Permease Recycling and Ubiquitination Status Reveal a Particular Role for Bro1 in the Multivesicular Body Pathway*

B. André, E. Nikko, A. Marini, 2003, Journal of Biological Chemistry.

NH4+-induced down-regulation of the Saccharomyces cerevisiae Gap1p permease involves its ubiquitination with lysine-63-linked chains.

B. André, J. Springael, R. Haguenauer‐Tsapis, 1999, Journal of cell science.

The Rh (rhesus) blood group polypeptides are related to NH4+ transporters.

B. André, A. Marini, A. Urrestarazu, 1997, Trends in biochemical sciences.

Cloning and expression of the MEP1 gene encoding an ammonium transporter in Saccharomyces cerevisiae.

B. André, A. Marini, S. Vissers, 1994, The EMBO journal.

Plasma membrane H+-ATPases promote TORC1 activation in plant suspension cells

B. André, C. Navarre, F. Chaumont, 2022, iScience.

In vivo N‐glycosylation of the Mep2 high‐affinity ammonium transporter of Saccharomyces cerevisiae reveals an extracytosolic N‐terminus

B. André, A. Marini, 2000, Molecular microbiology.

NPI1, an essential yeast gene involved in induced degradation of Gap1 and Fur4 permeases, encodes the Rsp5 ubiquitin—protein ligase

B. André, J. Springael, C. Volland, 1995, Molecular microbiology.

Converting the Yeast Arginine Can1 Permease to a Lysine Permease*

B. André, M. Prévost, Sylvain Brohée, 2014, The Journal of Biological Chemistry.

CYGD: the Comprehensive Yeast Genome Database

Shoshana J. Wodak, Christian Lemer, Jacques van Helden, 2004, Nucleic Acids Res..

Diversity of Nitrogen Metabolism Among Yeast Species: Regulatory and Evolutionary Aspects

E. Dubois, F. Messenguy, B. André, 2006 .

Nitrogen catabolite repressible GAP1 promoter, a new tool for efficient recombinant protein production in S. cerevisiae

B. André, J. Ruysschaert, C. Govaerts, 2013, Microbial Cell Factories.

Membrane trafficking of yeast transporters: mechanisms and physiological control of downregulation

B. André, R. Haguenauer‐Tsapis, 2004 .

An overview of membrane transport proteins in Saccharomyces cerevisiae

B. André, B Andre, 1995, Yeast.

The nucleotide sequence of Saccharomyces cerevisiae chromosome XIV and its evolutionary implications.

A. C. Jiménez, J. Ballesta, M. Crouzet, 1997, Nature.

The UGA3 gene regulating the GABA catabolic pathway in Saccharomyces cerevisiae codes for a putative zinc-finger protein acting on RNA amount

B. André, 2004, Molecular and General Genetics MGG.

Transcriptional Induction by Aromatic Amino Acids in Saccharomyces cerevisiae

B. André, S. Vissers, I. Iraqui, 1999, Molecular and Cellular Biology.

Effect of 21 Different Nitrogen Sources on Global Gene Expression in the Yeast Saccharomyces cerevisiae

Kevin Kontos, Gianluca Bontempi, Patrice Godard, 2007, Molecular and Cellular Biology.

Homo- and Hetero-oligomerization of Ammonium Transporter-1 \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(\mathrm{NH}_{4}^{+}\) \end{document} Uniporters*

B. André, W. Frommer, M. El Bakkoury, 2003, Journal of Biological Chemistry.

Homo- and hetero-oligomerization of ammonium transporter-1 NH4 uniporters.

B. André, W. Frommer, M. El Bakkoury, 2003, The Journal of biological chemistry.

Amino Acid Signaling in Yeast: Casein Kinase I and the Ssy5 Endoprotease Are Key Determinants of Endoproteolytic Activation of the Membrane-Bound Stp1 Transcription Factor

B. André, M. El Bakkoury, S. Vissers, 2004, Molecular and Cellular Biology.

Ubiquitination Mediated by the Npi1p/Rsp5p Ubiquitin-protein Ligase Is Required for Endocytosis of the Yeast Uracil Permease (*)

B. André, V. Moreau, C. Volland, 1996, The Journal of Biological Chemistry.

The yeast H+-ATPase Pma1 promotes Rag/Gtr-dependent TORC1 activation in response to H+-coupled nutrient uptake

B. André, Minoas Evangelinos, Christos Gournas, 2018, eLife.

Internal Amino Acids Promote Gap1 Permease Ubiquitylation via TORC1/Npr1/14-3-3-Dependent Control of the Bul Arrestin-Like Adaptors

B. André, Ahmad Merhi, 2012, Molecular and Cellular Biology.

The nucleotide sequence of chromosome IV from Saccharomyces cerevisiae

André Goffeau, Helmut Blöcker, Claude Jacq, 1997 .

Role of transporter like sensors in glucose and amino-acid signalling in yeast

Bruno André, B. André, E. Boles, 2004 .

Genetic analysis of the signalling pathway activated by external amino acids in Saccharomyces cerevisiae

B. André, Florent Bernard, 2001, Molecular microbiology.

Fungal plasma membrane domains

B. André, Christos Gournas, V. Sophianopoulou, 2019, FEMS Microbiology Reviews.

This review presents a domain-oriented view of the lateral organisation of the fungal plasma membrane, emphasizing on recent advances in the partitioning mechanisms of proteins into distinct compartments and their physiological significance.

B. André, Christos Gournas, V. Sophianopoulou, 2019, FEMS microbiology reviews.

The yeast ammonium transport protein Mep2 and its positive regulator, the Npr1 kinase, play an important role in normal and pseudohyphal growth on various nitrogen media through retrieval of excreted ammonium

B. André, A. Marini, M. Boeckstaens, 2007, Molecular microbiology.

Distinct Transport Mechanisms in Yeast Ammonium Transport/Sensor Proteins of the Mep/Amt/Rh Family and Impact on Filamentation*

B. André, A. Marini, M. Boeckstaens, 2008, Journal of Biological Chemistry.

Ubiquitylation and endocytosis of the human LAT1/SLC7A5 amino acid transporter

B. André, C. Barthelemy, 2019, Scientific Reports.

Mutant and chimeric recombinant plasminogen activators. Production in eukaryotic cells and preliminary characterization.

B. André, M. Hoylaerts, L. Pierard, 1987, The Journal of biological chemistry.

The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.

W Ansorge, E J Louis, E. Dubois, 1997, Nature.

The yeast YBR235w gene encodes a homolog of the mammalian electroneutral Na(+)-(K+)-C1- cotransporter family.

B. Scherens, B. André, 1995, Biochemical and Biophysical Research Communications - BBRC.

The α-Arrestin Bul1p Mediates Lactate Transporter Endocytosis in Response to Alkalinization and Distinct Physiological Signals.

B. André, S. Paiva, M. Casal, 2017, Journal of molecular biology.

Function and Regulation of Fungal Amino Acid Transporters: Insights from Predicted Structure.

B. André, M. Prévost, Eva-Maria Krammer, 2016, Advances in experimental medicine and biology.

Split-Ubiquitin Two-Hybrid Assay To Analyze Protein-Protein Interactions at the Endosome: Application to Saccharomyces cerevisiae Bro1 Interacting with ESCRT Complexes, the Doa4 Ubiquitin Hydrolase, and the Rsp5 Ubiquitin Ligase

B. André, E. Nikko, 2007, Eukaryotic Cell.

Saccharomyces cerevisiae Aqr1 Is an Internal-Membrane Transporter Involved in Excretion of Amino Acids

Sandra Tenreiro, B. André, S. Tenreiro, 2004, Eukaryotic Cell.

The putative monocarboxylate permeases of the yeast Saccharomyces cerevisiae do not transport monocarboxylic acids across the plasma membrane

B. André, E. Boles, S. Paiva, 2001, Yeast.

The Bul1/2 Alpha-Arrestins Promote Ubiquitylation and Endocytosis of the Can1 Permease upon Cycloheximide-Induced TORC1-Hyperactivation

B. André, Christos Gournas, V. Sophianopoulou, 2021, International journal of molecular sciences.

Amino Acid Signaling in Yeast: Post-genome Duplication Divergence of the Stp1 and Stp2 Transcription Factors*

B. André, S. Vissers, C. Jean, 2009, The Journal of Biological Chemistry.

Antonio Transcription Factor Activation of the Membrane-Bound Stp 1 Key Determinants of Endoproteolytic Kinase I and the Ssy 5 Endoprotease Are Amino Acid Signaling in Yeast : Casein

B. André, M. El Bakkoury, S. Vissers, 2004 .

JCB_200810114 493..502

B. André, C. Jacob, Elsa Lauwers, 2009 .

Evidence for coupled biogenesis of yeast Gap1 permease and sphingolipids: essential role in transport activity and normal control by ubiquitination.

B. André, G. Grossmann, Elsa Lauwers, 2007, Molecular biology of the cell.

Rhophilin-2 is targeted to late-endosomal structures of the vesicular machinery in the presence of activated RhoB.

B. André, P. Courtoy, I. Pirson, 2006, Experimental cell research.

Association of Yeast Transporters with Detergent‐Resistant Membranes Correlates with Their Cell‐Surface Location

B. André, Elsa Lauwers, 2006, Traffic.

The UGA43 negative regulatory gene of Saccharomyces cerevisiae contains both a GATA-1 type zinc finger and a putative leucine zipper

M. Grenson, B. André, S. Vissers, 1992, Current Genetics.

The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.

B. Dujon, J. Ballesta, N. Biteau, 1997, Nature.

A novel gamma-hydroxybutyrate dehydrogenase: identification and expression of an Arabidopsis cDNA and potential role under oxygen deficiency.

B. André, B. Shelp, W. Allan, 2003, The Journal of biological chemistry.

Nitrogen coordinated import and export of arginine across the yeast vacuolar membrane

B. André, A. DeLuna, I. Georis, 2020, PLoS genetics.

Positive and negative regulatory elements control the expression of the UGA4 gene coding for the inducible 4-aminobutyric-acid-specific permease in Saccharomyces cerevisiae.

M. Grenson, B. André, S. Vissers, 1989, European journal of biochemistry.

FTY720-induced endocytosis of yeast and human amino acid transporters is preceded by reduction of their inherent activity and TORC1 inhibition

B. André, L. Twyffels, C. Barthelemy, 2017, Scientific Reports.

Ferroptosis-Protective Membrane Domains in Quiescence

B. André, J. Zoidakis, F. Fröhlich, 2023, bioRxiv.

Gaussian Graphical Models to Infer Putative Genes Involved in Nitrogen Catabolite Repression in S. cerevisiae

Kevin Kontos, Gianluca Bontempi, Jacques van Helden, 2009, EvoBIO.

Machine learning techniques to identify putative genes involved in nitrogen catabolite repression in the yeast Saccharomyces cerevisiae

Kevin Kontos, Gianluca Bontempi, Patrice Godard, 2008, BMC proceedings.

Structural involvement in substrate recognition of an essential aspartate residue conserved in Mep/Amt and Rh-type ammonium transporters

B. André, B. Chérif-Zahar, A. Marini, 2006, Current Genetics.

Cross‐talk between ammonium transporters in yeast and interference by the soybean SAT1 protein

B. André, W. Frommer, J. Springael, 2000, Molecular microbiology.

The Npr 1 Kinase Controls Biosynthetic and Endocytic Sorting of the Yeast Gap 1 Permease *

B. André, O. Soetens, J. D. Craene, 2019 .

Overlapping Roles of Yeast Transporters Aqr1, Qdr2, and Qdr3 in Amino Acid Excretion and Cross-Feeding of Lactic Acid Bacteria

B. André, M. Prévost, Christos Gournas, 2021, Frontiers in Microbiology.

Physiological role of the putative ammonium transporter RhCG in the mouse.

B. André, C. Szpirer, J. Szpirer, 2006, Transfusion clinique et biologique : journal de la Societe francaise de transfusion sanguine.

YTPdb: a wiki database of yeast membrane transporters.

Yves Moreau, Roland Barriot, Sylvain Brohée, 2010, Biochimica et biophysica acta.

The ubiquitin code of yeast permease trafficking.

B. André, R. Haguenauer‐Tsapis, Z. Erpapazoglou, 2010, Trends in cell biology.

Fungal Plasma Membrane Domains This review presents a domain-oriented view of the lateral organisation of the fungal plasma membrane, emphasizing on recent advances in the partitioning mechanisms of proteins into distinct compartments and their physiological significance

B. André, Christos Gournas, V. Sophianopoulou, 2019 .

Nucleotide sequence of the yeast UGA1 gene encoding GABA transaminase.

J. Jauniaux, B. André, 1990, Nucleic Acids Research.

Induction of the 4-aminobutyrate and urea-catabolic pathways in Saccharomyces cerevisiae. Specific and common transcriptional regulators.

M. Grenson, B. André, S. Vissers, 1990, European journal of biochemistry.

Measuring the Activity of Plasma Membrane and Vacuolar Transporters in Yeast.

B. André, A. Mayer, M. Rompf, 2019, Methods in molecular biology.

A web site for the computational analysis of yeast regulatory sequences

J. Collado-Vides, B. André, J. Helden, 2000, Yeast.