Wei Wang

发表

A computational approach to simplifying the protein folding alphabet

Jun Wang, Wei Wang, 1999, Nature Structural Biology.

Atomistic Analysis of ToxN and ToxI Complex Unbinding Mechanism

Wei Wang, Jihua Wang, Guodong Hu, 2018, International journal of molecular sciences.

Localized frustration and binding-induced conformational change in recognition of 5S RNA by TFIIIA zinc finger.

Wei Wang, Wenfei Li, Cheng Tan, 2013, The journal of physical chemistry. B.

Protein folding simulations: From coarse‐grained model to all‐atom model

Lei Wu, Jian Zhang, Jun Wang, 2009, IUBMB life.

Folding with downhill behavior and low cooperativity of proteins

Jun Wang, Guanghong Zuo, Wei Wang, 2006, Proteins.

Overcoming the Bottleneck of the Enzymatic Cycle by Steric Frustration.

Jun Wang, Wei Wang, S. Takada, 2019, Physical review letters.

Energy landscape and multiroute folding of topologically complex proteins adenylate kinase and 2ouf-knot

Shoji Takada, Wei Wang, Tsuyoshi Terakawa, 2012, Proceedings of the National Academy of Sciences.

SO2 Emission Estimates Using OMI SO2 Retrievals for 2005–2017

Wei Wang, Jun Wang, R. Dickerson, 2019, Journal of geophysical research. Atmospheres : JGR.

PROTEINS: Structure, Function, and Bioinformatics 54:491–499 (2004) The Number of Protein Folds and Their Distribution Over Families in Nature

Ke Fan, Wei Wang, Wei Wang, 2022 .

CFD Prediction of Airfoil Drag in Viscous Flow Using the Entropy Generation Method

Wei Wang, Boyan Jiang, Jun Wang, 2018 .

Unexpected Position-Dependent Effects of Ribose G-Quartets in G-Quadruplexes.

N. Sugimoto, Wei Wang, G. Salgado, 2017, Journal of the American Chemical Society.

Atomistic simulation of the coupled adsorption and unfolding of protein GB1 on the polystyrenes nanoparticle surface

Jun Wang, Wei Wang, Hai Pan, 2017, 1711.03264.

Consequences of Hydrophobic Nanotube Binding on the Functional Dynamics of Signaling Protein Calmodulin

Jun Wang, Wei Wang, Wenfei Li, 2019, ACS omega.

Effectiveness of Φ-value analysis in the binding process of Arc repressor dimer.

Jun Wang, Wei Wang, Jian Zhang, 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

Simplification of complexity in protein molecular systems by grouping amino acids: a view from physics

Jun Wang, Wei Wang, 2016 .

Revealing the binding modes and the unbinding of 14-3-3σ proteins and inhibitors by computational methods

Wei Wang, Jihua Wang, Guodong Hu, 2015, Scientific Reports.

Understanding the folding and stability of a zinc finger‐based full sequence design protein with replica exchange molecular dynamics simulations

Jian Zhang, Wenfei Li, Wei Wang, 2007, Proteins.

Chirality-Dependent Adsorption between Amphipathic Peptide and POPC Membrane

Jun Wang, Wei Wang, Y. Sheng, 2019, International journal of molecular sciences.

Transcriptome and Network Changes in Climbers at Extreme Altitudes

Christopher D. Green, Huanming Yang, Jian Wang, 2012, PloS one.

Critical Fluctuations in the Native State of Proteins.

D. Chialvo, Jun Wang, Wei Wang, 2017, Physical review letters.

Role of water-bridged interactions in metal ion coupled protein allostery

Wei Wang, D. Thirumalai, Wenfei Li, 2022, bioRxiv.

Jun Wang, Wei Wang, Zhenxing Liu, 2019, Journal of biomolecular structure & dynamics.

Consequences of Energetic Frustration on the Ligand-Coupled Folding/Dimerization Dynamics of Allosteric Protein S100A12.

Jun Wang, Wei Wang, Weitong Ren, 2017, The journal of physical chemistry. B.

Molecular simulations of substrate release and coupled conformational motions in adenylate kinase

Wei Wang, Weitong Ren, Wenfei Li, 2016 .

Reduction of protein sequence complexity by residue grouping.

Jun Wang, Wei Wang, Tanping Li, 2003, Protein engineering.

Effects of heme binding on myoglobin folding: Coarse grained molecular simulations

Jun Wang, Wei Wang, Weitong Ren, 2015 .

Binding modes of Bcl-2 homology 3 (BH3) peptides with anti-apoptotic protein A1 and redesign of peptide inhibitors: a computational study

Jun Wang, Wei Wang, Jian Zhang, 2018, Journal of biomolecular structure & dynamics.

RNA3DCNN: Local and global quality assessments of RNA 3D structures using 3D deep convolutional neural networks

ZhangID, Wei Zhu, Jun Wang, 2018, PLoS Comput. Biol..

Folding behaviors of lattice model proteins with three kinds of contact potentials.

Jun Wang, Wei Wang, M. Qin, 2003, Physical review. E, Statistical, nonlinear, and soft matter physics.

Tonal noise reduction by unevenly spaced blades in a forward-curved-blades centrifugal fan

Jun Wang, Boyan Jiang, Wei Wang, 2019, Applied Acoustics.

An improved method of potential of mean force for protein-protein interactions

Jun Wang, Wei Wang, Wenfei Li, 2008 .

Metal-coupled folding of Cys2His2 zinc-finger.

Jun Wang, Wei Wang, Wenfei Li, 2008, Journal of the American Chemical Society.

Effects of solvents on the intrinsic propensity of peptide backbone conformations.

Wei Wang, Wenfei Li, Zuoxiu Tie, 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

Interplay between translational diffusion and large-amplitude angular jumps of water molecules.

Jun Wang, Wei Wang, Chao Liu, 2018, The Journal of chemical physics.

Correlation of reorientational jumps of water molecules in bulk water.

Wei Wang, Chao Liu, Wenfei Li, 2013, Physical review. E, Statistical, nonlinear, and soft matter physics.

Folding transition of model protein chains characterized by partition function zeros

Jun Wang, Wei Wang, 2003 .

Confinement effects on the kinetics and thermodynamics of protein dimerization

Wei Wang, Yaakov Levy, P G Wolynes, 2009, Proceedings of the National Academy of Sciences.

SPECIFIC BINDING OF A SHORT miRNA SEQUENCE BY ZINC KNUCKLES OF Lin28: A MOLECULAR DYNAMICS SIMULATION STUDY

Wei Wang, Wenfei Li, Cheng Tan, 2013 .

A Strategy to Delay the Development of Cisplatin Resistance by Maintaining a Certain Amount of Cisplatin-Sensitive Cells

Jun Wang, Wei Wang, Xiaoqi Zhang, 2017, Scientific Reports.

Surface-assisted assembly of a histidine-rich lipidated peptide for simultaneous exfoliation of graphite and functionalization of graphene nanosheets.

Wei Wang, Juewen Liu, P. Ouyang, 2019, Nanoscale.

Effects of Dexmedetomidine and ACE Genotype on Cardiovascular Response During the Decannulation Period of General Anesthesia in Patients With Essential Hypertension.

Wei Wang, Hong Gao, Jun Wang, 2020, Clinical therapeutics.

RNA3DCNN: Local and global quality assessments of RNA 3D structures using 3D deep convolutional neural networks

Jun Li, Wei Wang, Wei Zhu, 2018, PLoS Comput. Biol..

A case report of renal calyceal diverticulum with hypertension in children and review of literature

Wei Wang, Yongxiang Zhao, Ruimin Zhang, 2022, BMC Pediatrics.

Folding behavior of chaperonin‐mediated substrate protein

Jun Wang, Wei Wang, Jun Wang, 2005, Proteins.

Protein folding guides disulfide bond formation

Wei Wang, D. Thirumalai, M. Qin, 2015, Proceedings of the National Academy of Sciences.

Optogenetic induction of orbitostriatal long-term potentiation in the dorsomedial striatum elicits a persistent reduction of alcohol-seeking behavior in rats

P. Janak, Wei Wang, Yifeng Cheng, 2021, Neuropharmacology.

Role of water-bridged interactions in metal ion coupled protein allostery

Wei Wang, D. Thirumalai, Wenfei Li, 2019, bioRxiv.

Energy landscape views for interplays among folding, binding, and allostery of calmodulin domains

Shoji Takada, Wei Wang, Wenfei Li, 2014, Proceedings of the National Academy of Sciences.

Energy landscape remodeling mechanism of Hsp70-chaperone-accelerated protein folding

Wei Wang, Yichao Wu, Wenfei Li, 2021, Biophysical journal.

Tension at the Surface: Which Phase Is More Important, Liquid or Vapor?

Wei Wang, Y. Sheng, P. Chen, 2009, PloS one.

Effect of solvation-related interaction on the low-temperature dynamics of proteins.

Jun Wang, Wei Wang, Bin Xue, 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

Molecular simulations of metal-coupled protein folding.

Wei Wang, Jian Zhang, Jun Wang, 2015, Current opinion in structural biology.

Insights into the kinetic partitioning folding dynamics of human telomeric G-quadruplex from molecular simulations and machine learning.

Wei Wang, Jia-Feng Yu, Jihua Wang, 2020, Journal of chemical theory and computation.

Nucleation process in the folding of a domain-swapped dimer.

Jun Wang, Wei Wang, M. Qin, 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

Folding and dimerization of the ionic peptide EAK 16‐IV

Jun Wang, Wei Wang, Zhiqiang Yan, 2008, Proteins.

Interaction of an ionic complementary peptide with a hydrophobic graphite surface

Wei Wang, Y. Sheng, P. Chen, 2010, Protein science : a publication of the Protein Society.

Adsorption of an Ionic Complementary Peptide on the Hydrophobic Graphite Surface

Wei Wang, Pu Chen, Y. Sheng, 2010 .

Activation Pathways and Free Energy Landscapes of the SARS-CoV-2 Spike Protein

Wei Wang, Yichao Wu, Wenfei Li, 2021, ACS omega.

Inverse modeling of SO2 and NOx emissions over China using multi-sensor satellite data: 2. Downscaling techniques for air quality analysis and forecasts

Wei Wang, Jun Wang, D. Henze, 2019 .

Information spreading on multirelational networks

Wei Wang, Wei Wang, Bin Zhou, 2019, Physica A: Statistical Mechanics and its Applications.

Multiscale theory and computational method for biomolecule simulations

Wei Wang, Jun Wang, Jian Zhang, 2015 .

Atomistic Picture for the Folding Pathway of a Hybrid-1 Type Human Telomeric DNA G-quadruplex

Cheng Tan, Jun Wang, Wei Wang, 2014, PLoS Comput. Biol..

Binding of Copper Ions with Octapeptide Region in Prion Protein: Simulations with Charge Transfer Model.

Jun Wang, Wei Wang, Wenfei Li, 2019, The journal of physical chemistry. B.

Effects of zinc binding on the conformational distribution of the amyloid-beta peptide based on molecular dynamics simulations.

Jian Zhang, Jun Wang, Meng Qin, 2007, The journal of physical chemistry. B.

Identifying folding nucleus based on residue contact networks of proteins

Jie Li, Jun Wang, Wei Wang, 2008, Proteins.

Thermodynamic stability and kinetic foldability of a lattice protein model.

Jun Wang, Wei Wang, Jian Zhang, 2004, The Journal of chemical physics.

Modulation of Amyloid-β Conformation by Charge State of N-Terminal Disordered Region

Wei Wang, Wenfei Li, Wenhui Xi, 2012 .

Template induced conformational change of amyloid-β monomer.

Wei Wang, Wenfei Li, Wenhui Xi, 2012, The journal of physical chemistry. B.

Structure Prediction of RNA Loops with a Probabilistic Approach

Jun Wang, Wei Wang, Jian Zhang, 2016, PLoS Comput. Biol..

Comparative all-atomic study of unfolding pathways for proteins chymotrypsin inhibitor 2 and barnase.

Wei Wang, Y. Sheng, 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.

All‐atom replica exchange molecular simulation of protein BBL

Jun Wang, Wei Wang, Wenfei Li, 2008, Proteins.

Conformational phase diagram for proteins absorbed on ultra-small nanoparticles studied by a structure-based coarse-grained model

Wei Wang, Jian Zhang, Xinlu Guo, 2015 .

Hybrid Mass Balance/4D‐Var Joint Inversion of NOx and SO2 Emissions in East Asia

Wei Wang, Jun Wang, N. Theys, 2019, Journal of geophysical research. Atmospheres : JGR.

What is the minimum number of letters required to fold a protein?

Ke Fan, Wei Wang, Wei Wang, 2003, Journal of molecular biology.

Optimal Thermal Design of a Stacked Mini-Channel Heat Sink Cooled by a Low Flow Rate Coolant

Meng Liu, Wei Wang, Jun Wang, 2013, Entropy.

Influence of temperature and diffusive entropy on the capture radius of fly-casting binding

Jun Wang, Wei Wang, Jian Zhang, 2011 .

A Strategy to Delay the Development of Cisplatin Resistance by Maintaining a Certain Amount of Cisplatin-Sensitive Cells

Jun Wang, Wei Wang, X. Zou, 2017, Scientific Reports.

Confinement effects on the kinetics and thermodynamics of protein dimerization

P. Wolynes, Wei Wang, Y. Levy, 2009, Proceedings of the National Academy of Sciences.

Free Energy Landscape and Multiple Folding Pathways of an H-Type RNA Pseudoknot

Wei Wang, Yunqiang Bian, Jihua Wang, 2015, PloS one.

Tested Performance of JUNO 20” PMTs

Wei Wang, A. Olshevskiy, Jun Wang, 2020, Journal of Physics: Conference Series.

Nucleation process in the folding of a domain-swapped dimer.

Jun Wang, Wei Wang, M. Qin, 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

Interaction of an ionic complementary peptide with a hydrophobic graphite surface

Wei Wang, Y. Sheng, Pu Chen, 2010, Protein Science.

Inverse modeling of SO2 and NOx emissions over China using multisensor satellite data – Part 2: Downscaling techniques for air quality analysis and forecasts

Wei Wang, Jun Wang, D. Henze, 2020 .

All‐atom replica exchange molecular simulation of protein BBL

Jun Wang, Wei Wang, Wenfei Li, 2008, Proteins.