E. Holmes
发表
T. Lam,
C. Hon,
P. Lemey,
2012,
Molecular ecology.
David K. Smith,
Huachen Zhu,
Y. Guan,
2011,
Journal of Virology.
E. Holmes,
E. Gould,
X. de Lamballerie,
2003,
Advances in virus research.
E. Holmes,
E. Gould,
X. de Lamballerie,
2007,
Virology.
E. Holmes,
Honglong Wu,
G. Gao,
2020,
The Lancet.
K. Crandall,
E. Holmes,
D. Posada,
2002,
Annual review of genetics.
Huachen Zhu,
Y. Guan,
T. Lam,
2020,
bioRxiv.
E. Holmes,
N. Grassly,
1997,
Molecular biology and evolution.
E. Holmes,
N. Grassly,
P. Harvey,
1999,
Genetics.
E. Holmes,
2005,
Nature Genetics.
K. Crandall,
E. Holmes,
A. Rambaut,
2004,
Nature Reviews Genetics.
C. Viboud,
O. Pybus,
E. Holmes,
2016
.
Durrell D. Kapan,
M. Suchard,
O. Pybus,
2010,
Molecular biology and evolution.
E. Holmes,
A. Rambaut,
P. Harvey,
1995,
Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
O. Pybus,
E. Holmes,
S. Bennett,
2005,
Journal of Virology.
O. Pybus,
E. Holmes,
A. Rambaut,
2001,
Science.
O. Pybus,
E. Holmes,
J. Gog,
2004,
Science.
M. Altfeld,
B. Walker,
E. Holmes,
2004,
The Journal of experimental medicine.
Mark A. Miller,
George,
D. Lipman,
2006
.
E. Holmes,
B. Grenfell,
T. Kuiken,
2006,
Science.
E. Holmes,
D. Gubler,
S. Bennett,
2006,
The Journal of general virology.
E. Holmes,
Edward C. Holmes,
1998,
British medical bulletin.
Edward C Holmes,
E. Holmes,
J. Geoghegan,
2016,
Proceedings of the National Academy of Sciences.
E. Holmes,
G. Garnett,
G P Garnett,
1994,
Trends in ecology & evolution.
E. Holmes,
V. Sintchenko,
2015,
BMJ : British Medical Journal.
E. Holmes,
S. Duffy,
L. Shackelton,
2008,
Nature Reviews Genetics.
E. Holmes,
M. Nelson,
J. Hughes,
2014,
Journal of Virology.
Hua Yang,
Jing Zhang,
Ryan McBride,
2013,
PLoS pathogens.
Samir Bhatt,
Edward C Holmes,
Oliver G Pybus,
2011,
Molecular biology and evolution.
Charles H. Calisher,
Edward C. Holmes,
Donald S. Burke,
2008,
Microbiology and Molecular Biology Reviews.
Edward C. Holmes,
Andrew Rambaut,
Louis du Plessis,
2020,
Nature Microbiology.
Alice C Hughes,
E. Holmes,
Juan Li,
2020,
Current Biology.
E. Holmes,
Y. Hu,
Fan Wu,
2020,
Nature.
E. Holmes,
Yong-Zhen Zhang,
Yong‐Zhen Zhang,
2020,
Cell.
E. Holmes,
Yong-Zhen Zhang,
Yong‐Zhen Zhang,
2009
.
Edward C Holmes,
E. Holmes,
2008,
Annual review of microbiology.
E. Holmes,
2009
.
E. Holmes,
P. Simmonds,
Shiu-Wan Chan,
1993,
The Journal of general virology.
E. Holmes,
Man-Suen Chan,
J. Zhou,
2001,
Proceedings of the National Academy of Sciences of the United States of America.
Mark A. Miller,
C. Viboud,
E. Holmes,
2018,
Epidemics.
Jia-Fu Jiang,
Y. Guan,
T. Lam,
2020,
Nature.
E. Holmes,
N. Grubaugh,
M. Petrone,
2020,
Nature Microbiology.
E. Holmes,
A. Rambaut,
W. Lipkin,
2020,
Nature Medicine.
E. Holmes,
N. Ho,
Zhenhai Zhang,
2012,
PloS one.
E. Holmes,
A. Rambaut,
2004,
Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
E. Holmes,
2007,
PLoS biology.
Daniel J. Wilson,
O. Pybus,
E. Holmes,
2006,
Genetics.
Jay D. Evans,
J. Simons,
N. Moran,
2007,
Science.
E. Holmes,
F. Di Giallonardo,
P. Young,
2019,
Virus evolution.
E. Holmes,
M. Nelson,
2007,
Nature Reviews Genetics.
Omar E. Cornejo,
M. Feldman,
B. Birren,
2013,
PLoS pathogens.
E. Holmes,
A. Rambaut,
P. Harvey,
1996,
Journal of Molecular Evolution.
E. Holmes,
E. Simon-Lorière,
2011,
Nature Reviews Microbiology.
E. Holmes,
F. Di Giallonardo,
S. Duchêne,
2016,
Molecular biology and evolution.
E. Holmes,
S. Duffy,
B. Shapiro,
2009,
Journal of Virology.
E. Holmes,
S. Rossiter,
Jie Cui,
2013,
Virology.
E. Holmes,
P. Simmonds,
B. Irvine,
1993,
The Journal of general virology.
Pardis C Sabeti,
O. Faye,
E. Holmes,
2015,
Nature.
Nikos Vasilakis,
Edward C. Holmes,
Scott C. Weaver,
2011,
Nature Reviews Microbiology.
Omar E. Cornejo,
M. Feldman,
B. Birren,
2013,
PLoS Pathogens.
E. Holmes,
N. Anstey,
M. Davenport,
2019,
bioRxiv.
Edward C. Holmes,
Jun Li,
Jianguo Xu,
2016,
Nature.
M. Shi,
E. Holmes,
F. Di Giallonardo,
2017,
Journal of Virology.
M. Shi,
E. Holmes,
Yong-Zhen Zhang,
2018,
Cell.
E. Holmes,
A. Rambaut,
M. Worobey,
1999,
Proceedings of the National Academy of Sciences of the United States of America.
E. Holmes,
S. Burch,
E C Holmes,
2000,
Trends in microbiology.
Edward C Holmes,
E. Holmes,
S. Twiddy,
2003,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
E. Holmes,
T. Hlaing,
J. Aaskov,
2005,
Virology.
Chonticha Klungthong,
Edward C Holmes,
E. Holmes,
2006,
The Journal of general virology.
Edward C Holmes,
E. Holmes,
J. Aaskov,
2006,
Science.
Edward C Holmes,
E. Holmes,
2010,
Journal of molecular biology.
Dawn N. Birdsell,
D. Earn,
E. Holmes,
2014,
The Lancet. Infectious diseases.
Edward C. Holmes,
E. Holmes,
2003,
Journal of Virology.
Trevor Bedford,
Pardis C. Sabeti,
Christopher Tomkins-Tinch,
2015,
Cell.
E. Holmes,
Ana T. Duggan,
H. Poinar,
2020,
Genome Biology.
Timothy B. Stockwell,
T. Stockwell,
E. Holmes,
2013,
Journal of Virology.
R M May,
P H Harvey,
R. May,
1994,
Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
E. Holmes,
D. Harris,
C. Brayton,
2018,
Cell.
E. Holmes,
J. Geoghegan,
2018,
Genetics.
E. Holmes,
2016
.
Edward C. Holmes,
E. Holmes,
I. Pagán,
2010,
Journal of Virology.
Edward C. Holmes,
Jane Cardosa,
E. Holmes,
2009,
PLoS neglected tropical diseases.
E. Holmes,
D. Perera,
J. Cardosa,
2009,
Virus research.
M. Shi,
E. Holmes,
A. Hurt,
2019,
BMC Biology.
E. Holmes,
H. Whitwell,
U. Desselberger,
1994,
The Journal of general virology.
Edward C. Holmes,
Atila Iamarino,
E. Holmes,
2010,
PloS one.
E. Holmes,
F. Shanahan,
J. Marchesi,
2008
.
E. Holmes,
C. Balch,
R. Pollock,
1998
.
Edward C. Holmes,
Chonticha Klungthong,
E. Holmes,
2005,
Journal of Virology.
S. Halstead,
E. Holmes,
E. Gould,
2005,
Emerging infectious diseases.
Andrew Rambaut,
Edward C Holmes,
E. Holmes,
2003,
Molecular biology and evolution.
M. Shi,
E. Holmes,
R. Mourant,
2018,
bioRxiv.
E. Holmes,
A. Moya,
F. González-Candelas,
2004,
Nature Reviews Microbiology.
C. M. Saad-Roy,
Rachel E. Baker,
E. Emanuel,
2021,
Science.
Edward C Holmes,
Simon Y W Ho,
E. Holmes,
2015,
Molecular biology and evolution.
Yi Guan,
Edward C Holmes,
Huachen Zhu,
2016,
Annual review of genomics and human genetics.
M. Shi,
E. Holmes,
Y. Roisin,
2019,
Current Biology.
E. Holmes,
P. Simmonds,
D. Macdonald,
2003,
Virology.
E. Holmes,
2007,
Proceedings of the National Academy of Sciences.
E. Holmes,
B. Hjelle,
J. Cook,
2011,
Molecular ecology.
E. Holmes,
J. Geoghegan,
F. Di Giallonardo,
2018,
Viruses.
Cecile Viboud,
Eugene V Koonin,
Yuri I Wolf,
2006,
Biology Direct.
E. Holmes,
C. N. Niebuhr,
R. French,
2022,
bioRxiv.
K. Lindblade,
M. Shi,
E. Holmes,
2013,
The Journal of general virology.
Edward C Holmes,
E. Holmes,
Rubing Chen,
2006,
Molecular biology and evolution.
E. Holmes,
B. Grenfell,
J. Wood,
2013,
Proceedings of the Royal Society B: Biological Sciences.
E. Holmes,
J. Wood,
P. Murcia,
2011,
Journal of Virology.
O. Lund,
E. Holmes,
T. Sorrell,
2020,
Genome Biology.
E. Holmes,
A. Rambaut,
C. Woelk,
2000,
Journal of Molecular Evolution.
E. Holmes,
J. Buchmann,
2015,
Microbiology and Molecular Reviews.
E. Holmes,
Kate van Brussel,
Kate Van Brussel,
2021,
Current Opinion in Virology.
E. Holmes,
John-Sebastian Eden,
J. Cobbin,
2018,
Virus evolution.
Colin Simpson,
E. Holmes,
A. Sporle,
2020
.
E. Holmes,
T. Vaughan,
F. Di Giallonardo,
2019,
bioRxiv.
E. Holmes,
T. de Oliveira,
M. Ciccozzi,
2020,
medRxiv.
E. Holmes,
T. de Oliveira,
M. Ciccozzi,
2020,
Emerging microbes & infections.
E. Holmes,
W. Shi,
K. Alfsnes,
2021,
One health.
M. Shi,
E. Holmes,
C. Moritz,
2020,
Virus evolution.
E. Holmes,
W. Shi,
K. Alfsnes,
2020,
medRxiv.
E. Holmes,
D. Dwyer,
John-Sebastian Eden,
2019,
Diagnostic microbiology and infectious disease.
J. Epstein,
P. Daszak,
K. Lindblade,
2013,
Proceedings of the National Academy of Sciences.
E. Holmes,
R. Dale,
C. Blyth,
2021,
bioRxiv.
E. Holmes,
R. B. Reis,
T. de Oliveira,
2021,
Nature Communications.
E. Holmes,
R. Nogueira,
Stephane Fraga de Oliveira Tosta,
2020,
medRxiv.
O. Faye,
P. Lemey,
E. Holmes,
2020,
Emerging infectious diseases.
P. Lemey,
O. Pybus,
E. Holmes,
2018
.
P. Lemey,
O. Pybus,
E. Holmes,
2018,
Nature Microbiology.
Rachel S. G. Sealfon,
Pardis C Sabeti,
Nuno R. Faria,
2016,
bioRxiv.
E. Holmes,
I. Pagán,
E. Simon-Lorière,
2013,
Molecular biology and evolution.
E. Holmes,
P. Simmonds,
L. Zhang,
1993,
Journal of virology.
H. V. Bakel,
E. Holmes,
A. García-Sastre,
2020,
Emerging microbes & infections.
E. Holmes,
S. Ho,
S. Duchêne,
2020,
Current Biology.
Edward C. Holmes,
Robert Booy,
E. Holmes,
2014,
Virologica Sinica.
E. Holmes,
D. Dwyer,
J. Kok,
2017,
Journal of Virology.
E. Holmes,
Z. Memish,
J. Nguyen-Van-Tam,
2014,
Journal of Epidemiology and Global Health.
E. Holmes,
T. Sorrell,
V. Sintchenko,
2020,
bioRxiv.
Edward C. Holmes,
E. Holmes,
R. Phillips,
2005,
Journal of Virology.
E. Holmes,
L. Shackelton,
L. A. Shackelton,
2008,
Journal of theoretical biology.
M. Shi,
E. Holmes,
K. Rose,
2019,
One Health Outlook.
E. Holmes,
J. Lloyd-Smith,
R. Ke,
2013,
PLoS pathogens.
Richard J. Edwards,
E. Holmes,
R. Shine,
2018,
GigaScience.
E. Holmes,
C. Simmons,
M. Le,
2013,
PLoS neglected tropical diseases.
Timothy B. Stockwell,
T. Stockwell,
T. Lam,
2015,
Journal of Virology.
E. Holmes,
J. Geoghegan,
R. Gallagher,
2022,
Journal of virology.
E. Holmes,
Wen Wang,
Xian-dan Lin,
2017,
Journal of Virology.
E. Holmes,
J. Geoghegan,
2018,
Nature Reviews Genetics.
E. Holmes,
J. Bliska,
V. Vadyvaloo,
2018,
Journal of bacteriology.
E. Holmes,
J. Farrar,
C. Buckee,
2020
.
E. Holmes,
J. Ball,
M. Loose,
2020,
medRxiv.
E. Holmes,
H. Guzmán,
R. Tesh,
2015,
PLoS pathogens.
E. Holmes,
P. Ralph,
T. Kahlke,
2022,
bioRxiv.
E. Holmes,
A. Kelleher,
F. Di Giallonardo,
2019,
Viruses.
E. Holmes,
J. Geoghegan,
S. Duchêne,
2017,
PLoS pathogens.
E. Holmes,
G. Gao,
Juan Li,
2019,
Emerging microbes & infections.
E. Holmes,
Leming Shi,
F. Qian,
2020,
The EMBO journal.
P. Lemey,
O. Pybus,
E. Holmes,
2018
.
M. Shi,
E. Holmes,
C. Grueber,
2018,
bioRxiv.
E. Holmes,
N. Anstey,
M. Davenport,
2019,
PLoS pathogens.
E. Holmes,
P. Zanotto,
F. L. Melo,
2008,
Molecular biology and evolution.
E. Holmes,
Ming-hui Li,
Bin Yu,
2015,
Emerging infectious diseases.
E. Holmes,
P. Young,
E. McGraw,
2019,
PLoS pathogens.
S. Ritchie,
T. Scott,
E. Holmes,
2015,
The Lancet. Infectious diseases.
M. Shi,
E. Holmes,
A. Hurt,
2019,
The ISME Journal.
E. Holmes,
D. Macdonald,
J. Lewis,
2016
.
E. Holmes,
A. Rambaut,
K. Andersen,
2018,
Nature.
M. Shi,
E. Holmes,
N. Zhong,
2020,
Journal of thoracic disease.
E. Holmes,
I. Barr,
J. Geoghegan,
2018,
PLoS pathogens.
E. Holmes,
2008
.
E. Holmes,
H. Whittle,
A. Hall,
2001,
Journal of hepatology.
Ming-Hui Chen,
M. Shi,
E. Holmes,
2014,
BMC Evolutionary Biology.
J. Berzofsky,
E. Holmes,
P. Simmonds,
1996
.
H. Field,
E. Holmes,
Jie Cui,
2013,
Retrovirology.
E. Holmes,
E. Gould,
X. de Lamballerie,
2013,
PLoS pathogens.
M. Shi,
E. Holmes,
Wei-Chen Wu,
2018,
Current Opinion in Virology.
Mac P. Pierce,
Huachen Zhu,
Y. Guan,
2022,
Emerging infectious diseases.
E. Holmes,
L. Bargelloni,
T. Patarnello,
2022,
ACS Es&t Water.
Mac P. Pierce,
Huachen Zhu,
Y. Guan,
2022,
Emerging Infectious Diseases.
E. Holmes,
H. van Bakel,
A. García-Sastre,
2020,
medRxiv.
E. Holmes,
R. Dale,
C. Blyth,
2022,
The Journal of general virology.
M. Shi,
E. Holmes,
Yiyu Lu,
2020,
Scientific Reports.
Edward C. Holmes,
Andrew Rambaut,
Niall J. Lennon,
2011,
PLoS pathogens.
E. Holmes,
P. Calistri,
G. Migliorati,
2020,
Veterinary Microbiology.
E. Holmes,
Yan-Mei Chen,
Wen Wang,
2019,
Annual review of virology.
E. Holmes,
T. Vaughan,
F. Di Giallonardo,
2019,
bioRxiv.
E. Holmes,
G. B. Golding,
S. Duchêne,
2021,
Communications Biology.
E. Holmes,
I. Monne,
A. Schivo,
2018,
Virus evolution.
E. Holmes,
S. Ho,
K. Holt,
2016,
BMC Evolutionary Biology.
E. Holmes,
G. Bovo,
I. Monne,
2012,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
M. Pallen,
M. Perkins,
M. Koopmans,
2021,
Nature Microbiology.
Kristian G. Andersen,
M. Suchard,
E. Holmes,
2022,
Science.
E. Holmes,
Beatriz Perondi,
P. Zanotto,
2019,
Scientific Reports.
E. Holmes,
John-Sebastian Eden,
J. Kovaliski,
2015,
Journal of Virology.
E. Holmes,
J. Geoghegan,
M. Wille,
2020,
bioRxiv.
E. Holmes,
Hyunwook Lee,
S. Hafenstein,
2019,
Journal of Virology.
E. Holmes,
Hyunwook Lee,
S. Hafenstein,
2019,
bioRxiv.
E. Holmes,
2006,
Novartis Foundation symposium.
E. Holmes,
P. Simmonds,
Shiu-Wan Chan,
1992,
The Journal of general virology.
E. Holmes,
C. Parrish,
Miao Sun,
2016,
Virology.
E. Holmes,
Yan-Mei Chen,
Yong‐Zhen Zhang,
2022,
Virus evolution.
E. Holmes,
H. Verbruggen,
R. Wetherbee,
2020,
Viruses.
E. Holmes,
H. Verbruggen,
R. Wetherbee,
2020,
bioRxiv.
E. Holmes,
S. Duchêne,
2019,
mBio.
E. Holmes,
A. Rambaut,
D. Park,
2016,
Science.
Huachen Zhu,
Y. Guan,
T. Lam,
2015,
Journal of Virology.
E. Holmes,
P. Keim,
D. Wagner,
2014,
The Lancet. Infectious diseases.
E. Holmes,
Heng Wang,
L. Gong,
2022,
bioRxiv.
E. Holmes,
G. Palacios,
R. Jarman,
2008
.
E. Holmes,
H. Ellerbrok,
G. Palacios,
2008,
Emerging infectious diseases.
E. Holmes,
C. Firth,
P. Walker,
2019,
Virology.
M. Shi,
E. Holmes,
K. Rose,
2020,
Journal of Virology.
E. Holmes,
J. Taubenberger,
I. Brown,
2009
.
M. Shi,
E. Holmes,
Yihong Xiao,
2022,
Microbiome.
E. Holmes,
M. Worobey,
E C Holmes,
1999,
The Journal of general virology.
E. Holmes,
S. Duchêne,
2019,
Nature Reviews Microbiology.
E. Holmes,
2011,
Journal of Virology.
E. Holmes,
Xiao-fang Wang,
J. Aaskov,
2003,
Journal of Virology.
E. Holmes,
2006,
Proceedings of the National Academy of Sciences of the United States of America.
E. Holmes,
C. Parrish,
L. A. Shackelton,
2006,
Journal of Molecular Evolution.
E. Holmes,
Zhong-dao Wu,
Yan-Mei Chen,
2020,
Scientific Reports.
E. Holmes,
J. Geoghegan,
S. Waller,
2022,
bioRxiv.
E. Holmes,
Justine Charon,
R. French,
2022,
Virus evolution.
E. Holmes,
D. Bellwood,
J. Geoghegan,
2020,
bioRxiv.
E. Holmes,
Y. Liao,
Yong‐Zhen Zhang,
2019,
Scientific Reports.
E. Holmes,
Hamed Kazemi Shariat Panahi,
G. Guillemin,
2019,
Front. Cell. Infect. Microbiol..
E. Holmes,
R. Goldstein,
M. F. Boni,
2020
.
E. Holmes,
T. Sorrell,
L. Irinyi,
2019,
IMA Fungus.
E. Holmes,
T. Schlub,
J. Buchmann,
2018,
Molecular biology and evolution.
E. Holmes,
K. McColl,
A. Sunarto,
2016,
Virology Journal.
E. Holmes,
I. Jeanne,
J. Geoghegan,
2014,
PLoS neglected tropical diseases.
E. Holmes,
2007,
Proceedings of the National Academy of Sciences.
E. Holmes,
C. Parrish,
K. Hoelzer,
2007,
The Journal of general virology.
E. Holmes,
L. Zhang,
J. Froggatt,
1993,
JAMA.
E. Holmes,
D. Dwyer,
J. Kok,
2019,
SSRN Electronic Journal.
E. Holmes,
M. Worobey,
A. Cooper,
2004,
Journal of wildlife diseases.
E. Holmes,
J. Bohlin,
J. Hesson,
2020,
Emerging microbes & infections.
E. Holmes,
I. Cattadori,
D. Sim,
2022,
bioRxiv.
E. Holmes,
B. Grenfell,
P. Kellam,
2013,
Journal of Virology.
E. Holmes,
Zoe Stone,
K. Parker,
2022,
bioRxiv.
M. Suchard,
M. Koopmans,
M. Kraemer,
2022,
Science.
E. Holmes,
R. Tesh,
E. Ghedin,
2014,
Journal of Virology.
M. Shi,
E. Holmes,
R. Shao,
2022,
Parasites & Vectors.
E. Holmes,
J. Geoghegan,
K. Morgan,
2022,
bioRxiv.
M. Shi,
E. Holmes,
R. Shao,
2021
.
E. Holmes,
G. Rudenko,
T. Isobe,
2003,
Journal of Molecular Evolution.
E. Holmes,
J. Geoghegan,
M. Carrai,
2022,
bioRxiv.
E. Holmes,
2010,
Science.
E. Holmes,
Justine Charon,
J. Hesson,
2022,
Virus evolution.
V. Beneš,
E. Holmes,
L. Schouls,
2000,
Journal of Clinical Microbiology.
E. Holmes,
M. Nelson,
I. Monne,
2010
.
E. Holmes,
P. Simmonds,
B. Irvine,
1994
.
E. Holmes,
V. Sintchenko,
D. Dwyer,
2022,
Nature Communications.
E. Holmes,
H. Guzmán,
R. Tesh,
2014,
Veterinary microbiology.
E. Holmes,
Cécile Troupin,
C. Bouchier,
2019,
PLoS pathogens.
E. Holmes,
Yan-Mei Chen,
Jun-hua Tian,
2022,
Nature Microbiology.
E. Holmes,
J. Kaelber,
S. Hafenstein,
2011,
Journal of Virology.
E. Holmes,
J. Kaelber,
S. Hafenstein,
2011
.
E. Holmes,
Juan Li,
Hao Song,
2020,
Current Biology.
E. Holmes,
R. Hails,
M. Santos‐Reis,
2002,
International journal of medical microbiology : IJMM.
E. Holmes,
W. Morrison,
S. Ellis,
1995,
European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics.
E. Holmes,
A. Hurt,
T. Leen,
2022,
bioRxiv.
E. Holmes,
C. Parrish,
D. Kohler,
2014,
PLoS pathogens.
E. Holmes,
K. Rosario,
D. Bolnick,
2017,
mSystems.
E. Holmes,
C. Althaus,
T. de Oliveira,
2021,
medRxiv.
E. Holmes,
2011,
Nature.
E. Holmes,
K. Rose,
J. Mahar,
2022,
bioRxiv.
M. Suchard,
P. Lemey,
M. Shi,
2022,
Cell.
E. Holmes,
2019,
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
E. Holmes,
D. Vaughn,
S. Kalayanarooj,
2006
.
E. Holmes,
F. Gildow,
A. Stephenson,
2011,
Plant disease.
E. Holmes,
P. Simmonds,
R. Chapman,
1995,
Gut.
M. Shi,
E. Holmes,
M. Carrai,
2022,
Viruses.
E. Holmes,
Jie Cui,
2012,
Journal of Virology.
E. Holmes,
Jie Cui,
2012
.
Hoang Minh Tu Van,
E. Holmes,
D. Ha,
2015,
Journal of virological methods.
E. Holmes,
J. Geoghegan,
K. Morgan,
2023,
Virology.
E. Holmes,
J. Geoghegan,
R. Gallagher,
2022,
Journal of virology.
Daniel H. Huson,
Keith Dobney,
Patrick Semal,
2017,
Nature.
E. Holmes,
W. Morrison,
Karen A. Staines,
2000
.
E. Holmes,
P. Simmonds,
D. Smith,
1993,
The Lancet.
E. Holmes,
P. Simmonds,
P. Yap,
1995,
The Lancet.
E. Holmes,
P. Simmonds,
K. Fleming,
2017
.
Edward C. Holmes,
Andrew Rambaut,
Gytis Dudas,
2016,
Nature.
E. Holmes,
J. Taubenberger,
D. Morens,
2011,
The Journal of infectious diseases.
Marco Vignuzzi,
Christiane Bouchier,
Edward C Holmes,
2016,
PLoS pathogens.
Christl A. Donnelly,
Simon Cauchemez,
Edward C. Holmes,
2016,
PLoS pathogens.
E. Holmes,
E. Gould,
G. Moureau,
2009,
The Journal of general virology.
E. Holmes,
A. Vincent,
M. Gramer,
2012,
The Journal of general virology.
Colin Simpson,
E. Holmes,
A. Sporle,
2020,
Nature Communications.
Mikhail Prokopenko,
Rosemarie Sadsad,
Edward C. Holmes,
2020,
Nature Medicine.
E. Holmes,
Niu Zhou,
D. Irwin,
2020,
bioRxiv.
M. Prokopenko,
E. Holmes,
T. Sorrell,
2020,
bioRxiv.
N. R. Faria,
J. Quick,
I. M. Claro,
2017,
Nature.
P. Lemey,
E. Holmes,
F. Mutinelli,
2013,
Infection, Genetics and Evolution.
Jonathan E. Allen,
Tatum D. Mortimer,
E. Holmes,
2017,
eLife.
E. Holmes,
S. Bergström,
P. Ellström,
2020,
bioRxiv.
E. Holmes,
S. Duffy,
2007,
Journal of Virology.
E. Holmes,
J. Dunham,
A. Stephenson,
2014,
Virus research.
E. Holmes,
S. Cook,
A. Cooper,
2005,
Journal of medical entomology.
Edward C Holmes,
Oliver G Pybus,
O. Pybus,
2003,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
A. P. Adams,
E. Holmes,
A. Brault,
2010,
Journal of Virology.
E. Holmes,
S. Weaver,
K. Hanley,
2010,
Journal of Virology.
M. Shi,
E. Holmes,
T. Gaston,
2020,
bioRxiv.
E. Holmes,
F. Di Giallonardo,
2015,
PLoS pathogens.
E. Holmes,
M. Wille,
2020,
FEMS microbiology reviews.
E. Holmes,
J. J. Hayward,
C. Parrish,
2010,
Journal of Virology.
David W. Smith,
E. Holmes,
I. Barr,
2021,
Nature Communications.
E. Holmes,
M. Yabsley,
Justin D Brown,
2015,
PloS one.
E. Holmes,
Justin D Brown,
A. Fadly,
2014,
Virology.
E. Holmes,
J. Geoghegan,
J. Jandt,
2022,
Viruses.
Allison K. Miller,
E. Holmes,
N. Gemmell,
2021,
bioRxiv.
E. Holmes,
O. Bjørnstad,
L. Pomeroy,
2008,
Journal of Molecular Evolution.
E. Holmes,
E. Gould,
P. Zanotto,
1997,
Acta virologica.
E. Holmes,
E. Gould,
H. Reid,
1998,
The Journal of general virology.
E. Holmes,
R. French,
2019,
Trends in microbiology.
E. Holmes,
E. Massad,
P. Zanotto,
2009,
PLoS pathogens.
O. Pybus,
E. Holmes,
Honglong Wu,
2020,
Journal of Infection.
Timothy B. Stockwell,
T. Stockwell,
R. Rosenfeld,
2016,
Nature Genetics.
E. C. Mattos,
E. Holmes,
T. de Oliveira,
2022,
Nature Microbiology.
O. Pybus,
E. Holmes,
L. du Plessis,
2021,
Virus evolution.
E. Holmes,
J. Šlapeta,
D. Emery,
2021,
Frontiers in Microbiology.
Cécile Viboud,
Edward C. Holmes,
Elodie Ghedin,
2008,
PLoS pathogens.
C H Woelk,
E. Holmes,
C. Woelk,
2001,
The Journal of general virology.
S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification
E. Holmes,
P. Britton,
I. Monne,
2016,
Infection, Genetics and Evolution.
E. Holmes,
H. Bourhy,
P. Davis,
2006,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
Andrew Rambaut,
Edward C Holmes,
Oliver G Pybus,
2005,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
O. Pybus,
E. Holmes,
P. Simmonds,
2005,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
E. Holmes,
Zhenjie Zhang,
J. Ji,
2022,
The Lancet. Microbe.
M. Shi,
E. Holmes,
Bin Yu,
2016,
The Journal of general virology.
M. Shi,
E. Holmes,
Bin Yu,
2017,
Virology.
E. Holmes,
I. Monne,
A. Fusaro,
2011,
Vaccine.
E. Holmes,
C. Parrish,
P. Murcia,
2014,
Journal of Virology.
E. Holmes,
I. Monne,
A. Fusaro,
2011,
Journal of Virology.
M. Shi,
E. Holmes,
Yuyan You,
2022,
Frontiers in Veterinary Science.
E. Holmes,
P. Walker,
S. Davis,
2013,
Journal of Virology.
M. Shi,
E. Holmes,
Jun-hua Tian,
2015,
eLife.
E. Holmes,
K. Rose,
John-Sebastian Eden,
2020,
bioRxiv.
E. Holmes,
J. Rodger,
Ci-xiu Li,
2019,
Viruses.
E. Holmes,
D. McKeever,
W. Morrison,
1999,
Immunogenetics.
E. Holmes,
Karen A. Staines,
S. Ellis,
2003,
Immunogenetics.
E. Holmes,
I. Cattadori,
E. Ghedin,
2015,
Viruses.
M. Shi,
E. Holmes,
M. Carrai,
2019,
Viruses.
E. Holmes,
Justine Charon,
J. Cobbin,
2021,
Current opinion in virology.
M. Shi,
E. Holmes,
J. Mahar,
2020,
Journal of Virology.
M. Shi,
E. Holmes,
J. Mahar,
2019,
bioRxiv.
M. Shi,
E. Holmes,
K. Rose,
2019,
bioRxiv.
Nikos Vasilakis,
Edward C. Holmes,
Ming-Hui Chen,
2015,
Journal of Virology.
E. Holmes,
2012,
Current Opinion in Virology.
M. Shi,
E. Holmes,
A. Hurt,
2019,
BMC Biology.
M. Shi,
E. Holmes,
A. Hurt,
2018
.
E. Holmes,
F. Di Giallonardo,
Francesca Di Giallonardo,
2015,
Trends in microbiology.
E. Holmes,
J. Farrar,
S. Baker,
2011,
The American journal of tropical medicine and hygiene.
E. Holmes,
F. Mackenzie,
P. Kellam,
2019,
Life Science Alliance.
E. Holmes,
F. Mackenzie,
P. Kellam,
2019,
bioRxiv.
E. Holmes,
A. Brault,
S. Weaver,
2002,
Journal of Virology.
M. Pagel,
E. Holmes,
E. Gould,
2001,
Journal of Molecular Evolution.
E. Holmes,
A. Mangano,
L. Sen,
2006,
Journal of Virology.
E. Holmes,
H. Schlicht,
W. Carman,
1995,
The Journal of infectious diseases.
Mark A. Miller,
C. Viboud,
E. Holmes,
2009,
Virology.
E. Holmes,
P. Newton,
M. Mayxay,
2019,
Diagnostic microbiology and infectious disease.
Timothy B. Stockwell,
Hoang Minh Tu Van,
T. Stockwell,
2015,
Journal of Virology.
Timothy B. Stockwell,
Elodie Ghedin,
Xudong Lin,
2011,
The Journal of infectious diseases.
E. Holmes,
M. Fares,
2002,
Journal of Molecular Evolution.
E. Holmes,
P. Simmonds,
D. Smith,
1996,
The Journal of general virology.
E. Holmes,
R. Ma,
Bin Yu,
2019,
Virology.
M. Shi,
E. Holmes,
J. Beatty,
2018,
Viruses.
E. Holmes,
R. Ma,
Guoqiang Zhao,
2017,
Virology.
E. Holmes,
T. Ng,
F. Di Giallonardo,
2016,
Journal of Virology.
E. Holmes,
D. Stallknecht,
A. B. Allison,
2015,
Virology.
E. Holmes,
P. Simmonds,
P. Yap,
1995,
The Journal of general virology.
E. Holmes,
P. Bollyky,
1999,
Journal of Molecular Evolution.
E. Holmes,
C. Rice,
P. Simmonds,
1994,
Hepatology.
E. Holmes,
L. Morris,
G. Gray,
2007,
AIDS research and human retroviruses.
E. Holmes,
Yang Zhou,
2007,
Journal of Molecular Evolution.
Edward C. Holmes,
Andrew Rambaut,
Oliver G. Pybus,
2002,
Journal of Molecular Evolution.
Sebastián Duchêne,
Edward C Holmes,
Simon Y W Ho,
2015,
Molecular biology and evolution.
Marc A Suchard,
Andrew Rambaut,
Andrew Kitchen,
2010,
Molecular biology and evolution.
Edward C Holmes,
E. Holmes,
Gareth M Jenkins,
2003,
Virus research.
E. Holmes,
P. Klenerman,
M. Feeney,
2005,
Journal of Virology.
E. Holmes,
E. Simon-Lorière,
2013,
Molecular biology and evolution.
E. Holmes,
E. Ghedin,
A. Fitch,
2012,
The Journal of infectious diseases.
E. Holmes,
2010,
Nature.
Paul A. Pickering,
E. Holmes,
Wenjun Liu,
2016,
Emerging infectious diseases.
Amogelang R. Raphenya,
E. Holmes,
G. B. Golding,
2020,
Genome Biology.
Juan Carlos Albarracín Matute,
E. Holmes,
M. Henn,
2010,
The Journal of infectious diseases.
Jie Cui,
Edward C. Holmes,
Timothy E. Schlub,
2014,
Journal of Virology.
Analyses of evolutionary dynamics in viruses are hindered by a time-dependent bias in rate estimates
E. Holmes,
S. Ho,
S. Duchêne,
2014,
Proceedings of the Royal Society B: Biological Sciences.
E. Holmes,
S. Ho,
S. Duchêne,
2015,
BMC Evolutionary Biology.
M. Ashburner,
E. Holmes,
P. Jeffs,
1994,
Molecular biology and evolution.
G. Pesole,
C. Saccone,
E. Holmes,
1989
.
E. Holmes,
Juan Li,
Tao Hu,
2021,
Briefings Bioinform..
Timothy B. Stockwell,
Gavin J. D. Smith,
T. Stockwell,
2015,
eLife.
R. Sanjuán,
E. Holmes,
V. Furió,
2007,
PLoS genetics.
E. Holmes,
P. Zanotto,
E. Kallás,
1999,
Genetics.
O. Pybus,
E. Holmes,
R. Phillips,
2006
.
D. Earn,
M. Shi,
E. Holmes,
2014,
The New England journal of medicine.
E. Holmes,
D. Tscharke,
I. Cattadori,
2012,
PLoS pathogens.
E. Holmes,
Ana T. Duggan,
S. Duchêne,
2018,
PLoS pathogens.
Edward C. Holmes,
E. Holmes,
A. Moya,
2002,
Journal of Virology.
E. Holmes,
1991,
Journal of Molecular Evolution.
E. Holmes,
E. Gould,
G. Moureau,
2012,
The Journal of general virology.
David J. Edwards,
E. Holmes,
K. Holt,
2016,
bioRxiv.
E. Holmes,
2010,
Proceedings of the National Academy of Sciences.
M. Shi,
E. Holmes,
A. Plyusnin,
2014,
Proceedings of the National Academy of Sciences.
M. Shi,
E. Holmes,
Wen Wang,
2018,
Nature.
E. Holmes,
A. Sajantila,
G. B. Golding,
2016,
Current Biology.
E. Holmes,
Ana T. Duggan,
D. A. Herring,
2016,
Current Biology.
E. Holmes,
G. B. Golding,
J. Krause,
2016,
bioRxiv.
E. Holmes,
M. Maiden,
L. Baillie,
2004,
Journal of bacteriology.
E. Holmes,
F. Di Giallonardo,
A. Read,
2018,
Journal of Virology.
E. Holmes,
I. Cattadori,
D. Sim,
2017,
Journal of Virology.
E. Holmes,
D. Tscharke,
I. Cattadori,
2013,
Journal of Virology.
E. Holmes,
D. Tscharke,
I. Cattadori,
2013,
Journal of Virology.
E. Holmes,
E. Jarvis,
M. Gilbert,
2014,
Genome Biology.
E. Holmes,
R. Page,
B. Swalla,
2001
.
E. Holmes,
I. Pagán,
E. Simon-Lorière,
2012,
Journal of Virology.
E. Holmes,
I. Pagán,
E. Simon-Lorière,
2012
.
E. Holmes,
I. Pagán,
E. Simon-Lorière,
2012
.
Vanessa R. Marcelino,
Philip Thomas Lanken Conradsen Clausen,
Jan P. Buchmann,
2019,
Genome Biology.
E. Holmes,
A. Polkinghorne,
D. Madden,
2019,
Viruses.
M. Shi,
E. Holmes,
C. Grueber,
2019,
Journal of Virology.
Daniel J. Wilson,
Alexei J Drummond,
Daniel J Wilson,
2006,
BMC Evolutionary Biology.
M. Shi,
E. Holmes,
Wei-Chen Wu,
2022,
Virus evolution.
O. Faye,
E. Holmes,
S. Weaver,
2007,
Journal of Virology.
Edward C Holmes,
E. Holmes,
2003,
Trends in Microbiology.
E. Holmes,
A. Rethwilm,
J. Bodem,
2007,
Virology.
E. Holmes,
P. Simmonds,
L. Zhang,
1992,
Proceedings of the National Academy of Sciences of the United States of America.
E. Holmes,
Bin Yu,
Jun-hua Tian,
2017,
Ticks and tick-borne diseases.
E. Holmes,
Xue-bing Ni,
J. Dumler,
2016,
Scientific Reports.
Ming-Hui Chen,
M. Shi,
E. Holmes,
2014,
BMC Evolutionary Biology.
E. Holmes,
Y. Liao,
Yong‐Zhen Zhang,
2019,
Scientific Reports.
E. Holmes,
Leming Shi,
F. Qian,
2020,
medRxiv.
W. Heneine,
C. Kuiken,
E. Holmes,
2005,
Nature.
E. Holmes,
H. Guzmán,
R. Tesh,
2015,
The American journal of tropical medicine and hygiene.
E. Holmes,
Yan-Mei Chen,
Wen Wang,
2020,
Virus evolution.
E. Holmes,
Elizabeth R Chare,
E. R. Chare,
2004,
The Journal of general virology.
E. Holmes,
H. Drummer,
P. Poumbourios,
2020,
Proceedings of the National Academy of Sciences.
E. Holmes,
E. Gould,
P. Zanotto,
1996,
Journal of virology.
E. Holmes,
M. Sadkowska-Todys,
N. Tordo,
1999,
The Journal of general virology.
Wladimir J Alonso,
E. Holmes,
W. V. D. van der Poel,
2005,
Journal of Virology.
E. Holmes,
G. Munkvold,
J. Dunham,
2013,
Virus research.
C. M. Saad-Roy,
Rachel E. Baker,
O. Pybus,
2021,
Science.
Alice C Hughes,
E. Holmes,
Juan Li,
2021,
Cell.
E. Holmes,
A. Rambaut,
R. Garry,
2020,
Nature Medicine.
M. Beekman,
M. Shi,
E. Holmes,
2017,
Journal of Virology.
E. Holmes,
Rajwinder Singh,
E. Rajotte,
2013,
Virus research.
E. Holmes,
J. Kaelber,
C. Parrish,
2012
.
E. Holmes,
J. Kaelber,
C. Parrish,
2011,
Journal of Virology.
E. Holmes,
S. Carver,
J. Šlapeta,
2020,
Parasites & Vectors.
E. Holmes,
E. Gould,
G. Comach,
2003,
The Journal of general virology.
Edward C. Holmes,
Andrew Rambaut,
Louis du Plessis,
2020,
bioRxiv.
Ira W. Deveson,
Nikki E. Freed,
Nuno R. Faria,
2021,
Wellcome open research.
E. Holmes,
E. Gould,
P. de Micco,
2002,
The Journal of general virology.
T. V. Frolova,
E. Holmes,
E. Gould,
1997,
Virus research.
E. Holmes,
E. Gould,
T. Gritsun,
1995,
Virus research.
Chonticha Klungthong,
Edward C Holmes,
E. Holmes,
2004,
Virology.
E. Holmes,
A. Nisalak,
D. Vaughn,
2002,
Virology.
E. Holmes,
S. Duffy,
2009,
The Journal of general virology.
E. Holmes,
J. Geoghegan,
R. Gallagher,
2022,
bioRxiv.
N. Lennon,
B. Birren,
M. Quail,
2010,
PLoS neglected tropical diseases.
Mark J. Schreiber,
E. Holmes,
Harold Soh,
2009,
Journal of Virology.
E. Holmes,
A. Pyke,
Sook-San Wong,
2004,
Virology.
E. Holmes,
J. Aaskov,
A. Kitchen,
2010,
The Journal of general virology.
E. Holmes,
D. Bellwood,
J. Geoghegan,
2021
.
Cécile Viboud,
Amy L. Vincent,
Marc A. Suchard,
2015,
Nature Communications.
E. Holmes,
A. Barrett,
J. Bryant,
2007,
PLoS pathogens.
E. Holmes,
M. Gillings,
J. Geoghegan,
2020,
Virus evolution.
E. Holmes,
M. Gillings,
J. Geoghegan,
2020,
bioRxiv.
P. Lemey,
O. Pybus,
E. Holmes,
2018,
Nature Microbiology.
E. Holmes,
T. Jaenson,
P. Wilhelmsson,
2023,
Microbial genomics.
M. Shi,
E. Holmes,
A. Imrie,
2017,
Journal of Virology.
E. C. Holmes,
E. Holmes,
S. Kalayanarooj,
2006,
Proceedings of the National Academy of Sciences.
E. Holmes,
E. Gould,
G. Comach,
2001,
The Journal of general virology.
E. Holmes,
E. Gould,
P. Zanotto,
2001,
Advances in virus research.
E. Holmes,
D. Stallknecht,
E. Bréard,
2012,
Virology.
M. Shi,
E. Holmes,
Ming-hui Li,
2016,
Virology.
M. Shi,
E. Holmes,
S. Doggett,
2018,
Journal of Virology.
Edward C. Holmes,
Anavaj Sakuntabhai,
Amadou A. Sall,
2016,
Cell.
E. Holmes,
A. Telenti,
M. Diamond,
2021,
Nature.
Alexei J Drummond,
Robert P Freckleton,
Andrew Rambaut,
2007,
Molecular biology and evolution.
E. Holmes,
M. Petrone,
Erin Harvey,
2023,
EMBO reports.
E. Holmes,
2022,
Science.
M. Shi,
E. Holmes,
C. Moritz,
2020,
bioRxiv.
Edward C Holmes,
E. Holmes,
J. Geoghegan,
2017,
Open Biology.
Jonathan A. Runstadler,
David E. Swayne,
Edward C. Holmes,
2008,
PLoS pathogens.
Mark A. Miller,
J. Dushoff,
C. Macken,
2007,
Molecular biology and evolution.
M. Shi,
E. Holmes,
John-Sebastian Eden,
2019,
bioRxiv.
E. Holmes,
Yan-Mei Chen,
Xian-dan Lin,
2020,
Virus evolution.
E. Holmes,
J. Geoghegan,
2018,
Nature Reviews Genetics.
E. Holmes,
C. Parrish,
B. Dalziel,
2017,
Emerging infectious diseases.
Stephen P. Ellner,
Edward C. Holmes,
Nimalan Arinaminpathy,
2014,
PLoS pathogens.
E. Holmes,
G. Dougan,
S. Moule,
2010,
Journal of Virology.
E. Holmes,
2022,
Annual review of virology.
E. Holmes,
J. Farrar,
A. Rambaut,
2021,
Cell.
E. Holmes,
C. Woelk,
H. Bourhy,
2002,
Virology.
E. Holmes,
Ming-hui Li,
Wen Wang,
2013,
PLoS pathogens.
Michael W Taylor,
Michael W. Taylor,
E. Holmes,
2022,
bioRxiv.
E. Holmes,
C. Huang,
A. Brault,
2007,
Nature Genetics.
E. Holmes,
S. Murray,
Justine Charon,
2021,
bioRxiv.
N. Lennon,
B. Birren,
M. Zody,
2012,
Journal of Virology.
E. Holmes,
W. Liu,
J. Aaskov,
2011,
Journal of Virology.
E. Holmes,
J. Aaskov,
Kym Lowry,
2007,
The Journal of general virology.
E. Holmes,
2007
.
E. Holmes,
D. Vaughn,
S. Kalayanarooj,
2006,
The Journal of general virology.
E. Holmes,
2006
.
E. Holmes,
P. Zanotto,
C. Romano,
2008,
Journal of Molecular Evolution.
Andrew Rambaut,
Edward C Holmes,
Oliver G Pybus,
2006,
Molecular biology and evolution.
Edward C. Holmes,
E. Holmes,
2003,
Journal of Virology.
E. Holmes,
C. Woelk,
2002,
Molecular biology and evolution.
E. Holmes,
M. Worobey,
2001,
Molecular biology and evolution.
E. Holmes,
D. Gubler,
S. Bennett,
2003,
Molecular biology and evolution.
E. Holmes,
S. Twiddy,
S. Twiddy,
2003,
The Journal of general virology.
Edward C Holmes,
Graham Lloyd,
E. Holmes,
2002,
Virology.
E. Holmes,
A. Rambaut,
M. Worobey,
1999,
Molecular biology and evolution.
E. Holmes,
E. Gould,
G. Gao,
1996,
Proceedings of the National Academy of Sciences of the United States of America.
Trevor Bedford,
George F. Gao,
Andrew J. Tatem,
2017,
Nature.
E. Holmes,
Ming-hui Li,
Wen Wang,
2017,
Virology.
E. Holmes,
A. Drummond,
Alexei J. Drummond,
2007,
Current topics in microbiology and immunology.
E. Holmes,
A. Rambaut,
2004
.
David K. Smith,
Huachen Zhu,
Y. Guan,
2016,
Science.
E. Holmes,
2009,
The Journal of clinical investigation.
E. Holmes,
A. Kitchen,
L. A. Shackelton,
2010,
Proceedings of the National Academy of Sciences.
E. Holmes,
A. Nisalak,
R. Jarman,
2009,
Emerging infectious diseases.
Eleca J. Dunham,
E. Holmes,
J. Reynes,
2008,
The Journal of general virology.
E. Holmes,
E. Marzinelli,
M. Petrone,
2022,
bioRxiv.
M. Shi,
E. Holmes,
Yong‐Zhen Zhang,
2017,
Virus Research.
S. Bhatt,
Y. Guan,
T. Lam,
2013,
Philosophical Transactions of the Royal Society B: Biological Sciences.
E. Holmes,
P. Zanotto,
C. Romano,
2007,
Virology.
E. Holmes,
L. A. Shackelton,
2006,
Journal of Virology.
E. Holmes,
P. Simmonds,
D. Macdonald,
2000,
Journal of Virology.
E. Holmes,
P. Simmonds,
R. Kaiser,
1995,
AIDS research and human retroviruses.
E. Holmes,
A. Leigh Brown,
J. Brown,
1994
.
M. Shi,
E. Holmes,
R. Shine,
2018,
Journal of Virology.
E. Holmes,
P. Simmonds,
H. Brown,
1994,
Journal of virology.
M. Shi,
E. Holmes,
Ming-hui Li,
2015,
Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.
E. Holmes,
P. Simmonds,
M. Urdea,
1994,
The Journal of general virology.
E. Holmes,
P. Simmonds,
L. Zhang,
1993,
The Journal of infectious diseases.
Todd M. Allen,
T A Roach,
M. Altfeld,
2004,
Nature Medicine.
Edward C. Holmes,
Anthony D. Kelleher,
Christian Brander,
2001,
The Journal of experimental medicine.
E. Holmes,
A. Fusaro,
G. Cattoli,
2016,
Front. Microbiol..
E. Holmes,
A. Read,
John-Sebastian Eden,
2015,
Journal of Virology.
E. Holmes,
M. Fourment,
2015,
BMC Evolutionary Biology.
Mathieu Fourment,
Edward C Holmes,
E. Holmes,
2014,
BMC Evolutionary Biology.
E. Holmes,
D. Peacock,
J. Abrantes,
2014,
Molecular ecology.
E. Holmes,
S. Duchêne,
J. Bohlin,
2021,
Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.
E. Holmes,
S. Duchêne,
J. Bohlin,
2020,
medRxiv.
Paolo Calistri,
Alessio Lorusso,
Maurilia Marcacci,
2020,
Viruses.
E. Holmes,
T. Sorrell,
V. Sintchenko,
2020,
bioRxiv.
Edward C Holmes,
Annette Oxenius,
A. Trkola,
2004,
The Journal of infectious diseases.
E. Holmes,
E C Holmes,
2001,
Biological reviews of the Cambridge Philosophical Society.
M. Suchard,
A. Tatem,
P. Lemey,
2011,
PLoS Pathogens.
M. Suchard,
A. Tatem,
P. Lemey,
2010,
PLoS pathogens.
O. Faye,
E. Holmes,
I. Capua,
2009,
The Journal of general virology.
Olivier Delmas,
Edward C. Holmes,
Christiane Bouchier,
2008,
PloS one.
E. Holmes,
A. Rambaut,
H. Bourhy,
2007,
Archives of Virology.
E. Holmes,
P. Walker,
J. Cowley,
2005,
The Journal of general virology.
E. C. Mattos,
E. Holmes,
T. de Oliveira,
2021,
medRxiv.
E. Holmes,
Yong‐Zhen Zhang,
2015,
Current opinion in virology.
Edward C Holmes,
E. Holmes,
2004,
Molecular ecology.
E. Holmes,
J. Geoghegan,
D. Gilligan,
2021,
bioRxiv.
Å. Andreassen,
M. Shi,
E. Holmes,
2017,
Scientific Reports.
E. Holmes,
R. Tesh,
G. Palacios,
2013,
Virology.
E. Holmes,
H. Guzmán,
R. Tesh,
2013,
The Journal of general virology.
O. Faye,
E. Holmes,
G. Kennedy,
2010,
Journal of Virology.
E. Holmes,
J. Mackenzie,
J. Twin,
2003,
The Journal of general virology.
Judith M. Fonville,
E. Holmes,
Gregory D. Gromowski,
2015,
Science.
Kirk D Mundal,
E. Holmes,
H. Guzmán,
2014,
The Journal of general virology.
E. Holmes,
Ming-hui Li,
A. Plyusnin,
2014,
PloS one.
E. Holmes,
E. J. Dunham,
2007,
Journal of Molecular Evolution.
E. Holmes,
J. Taubenberger,
M. F. Boni,
2008,
Journal of Virology.
E. Holmes,
R. Tesh,
S. Widen,
2013,
Virology Journal.
E. Holmes,
C. Parrish,
N. Osterrieder,
2014
.
E. Holmes,
J. Wood,
C. Parrish,
2010,
Journal of Virology.
Cecile Viboud,
Mark A. Miller,
Edward C Holmes,
2007,
PLoS pathogens.
Martin A. Nowak,
Sebastian Bonhoeffer,
Edward C. Holmes,
1995,
Nature.
M. Shi,
E. Holmes,
S. Tong,
2017,
Journal of Virology.
E. Holmes,
Fan Wu,
Su Zhao,
2020,
bioRxiv.
Edward C. Holmes,
Nguyet Minh Nguyen,
T. V. Tuan,
2013,
Proceedings of the National Academy of Sciences.
Edward C. Holmes,
Colin R. Parrish,
E. Holmes,
2008,
Journal of Virology.
E. Holmes,
C. Parrish,
K. Hoelzer,
2008,
The Journal of general virology.
Edward C Holmes,
E. Holmes,
C. Parrish,
2005,
Proceedings of the National Academy of Sciences of the United States of America.
E. Holmes,
K. Rose,
Wei-Shan Chang,
2021,
One Health.
E. Holmes,
Z. Richards,
M. Petrone,
2023,
bioRxiv.
Cécile Viboud,
Marc A. Suchard,
Edward C. Holmes,
2011,
PLoS pathogens.
E. Holmes,
J. Farrar,
C. Simmons,
2010,
PLoS neglected tropical diseases.
Edward C. Holmes,
Bryan T. Grenfell,
E. Holmes,
2009,
PLoS Comput. Biol..
Cecile Viboud,
Mark A. Miller,
Edward C. Holmes,
2008,
PLoS pathogens.
E. Holmes,
P. Simmonds,
L. Zhang,
1995,
The Journal of infectious diseases.
Jian K. Liu,
E. Holmes,
Juan Li,
2023,
Microbiology spectrum.
M. Shi,
E. Holmes,
V. Eldholm,
2017,
Scientific Reports.
E. Holmes,
H. Guzmán,
R. Tesh,
2013,
Virology.
E. Holmes,
B. Spratt,
N. Smith,
1999,
Molecular biology and evolution.
J. Oxford,
E. Holmes,
A. Hurt,
2021,
Clinical Microbiology Reviews.
R. Sebra,
E. Holmes,
E. Ghedin,
2015,
mBio.
Cécile Viboud,
Yi Tan,
Edward C Holmes,
2013,
Philosophical Transactions of the Royal Society B: Biological Sciences.
Edward C. Holmes,
Maciej F. Boni,
E. Holmes,
2010,
PloS one.
Edward C. Holmes,
Elodie Ghedin,
Kirsten St. George,
2009,
Journal of Virology.
E. Holmes,
Rubing Chen,
2009,
Journal of Molecular Evolution.
Bryan T Grenfell,
Yiming Bao,
Steven L Salzberg,
2005,
PLoS biology.
M. Shi,
E. Holmes,
V. Sintchenko,
2017,
Emerging infectious diseases.
E. Holmes,
E. Gould,
E C Holmes,
1997,
Nucleic acids research.
E. Holmes,
D. Bellwood,
J. Geoghegan,
2022,
bioRxiv.
E. Holmes,
J. Geoghegan,
Rebecca M Grimwood,
2021,
bioRxiv.
M. Shi,
E. Holmes,
N. Lo,
2020,
Viruses.
Edward C Holmes,
M. Shi,
E. Holmes,
2018,
Virus evolution.
E. Holmes,
Ana T. Duggan,
H. Poinar,
2017,
Viruses.
E. Holmes,
John-Sebastian Eden,
Ci-xiu Li,
2021,
bioRxiv.
E. Holmes,
M. Wille,
2019,
Cold Spring Harbor perspectives in medicine.
E. Holmes,
S. Doggett,
K. Rose,
2019,
Virology.
Cecile Viboud,
Bryan T Grenfell,
Mark A. Miller,
2006,
PLoS pathogens.
E. Holmes,
C. dePamphilis,
D. vanEngelsdorp,
2010,
PloS one.
M. Shi,
E. Holmes,
J. Ball,
2019,
Viruses.
E. Holmes,
2011,
Journal of Virology.
T. Stockwell,
E. Holmes,
A. Vincent,
2012,
The Journal of general virology.
Christopher H Woelk,
Edward C Holmes,
E. Holmes,
2002,
The Journal of general virology.
Edward C. Holmes,
Mathieu Fourment,
E. Holmes,
2016,
BMC Research Notes.
M. Shi,
E. Holmes,
Ming-hui Li,
2014,
Virology.
E. Holmes,
M. Charleston,
C. Ramsden,
2008,
Molecular biology and evolution.
Sebastián Duchêne,
Edward C Holmes,
E. Holmes,
2015,
BMC Evolutionary Biology.
Andrew Rambaut,
E. Holmes,
A. Rambaut,
2009,
PLoS currents.
E. Holmes,
Fuchun Zhang,
H. Tian,
2017,
Journal of Virology.
E. Holmes,
I. Cattadori,
D. Sim,
2017,
Proceedings of the National Academy of Sciences.
E. Holmes,
I. Cattadori,
E. Ghedin,
2017,
PLoS pathogens.
E. Holmes,
J. Geoghegan,
A. Senior,
2016,
Proceedings of the Royal Society B: Biological Sciences.
Ruchi M. Newman,
B. Birren,
M. Zody,
2015,
Journal of Virology.
E. Holmes,
A. Varki,
Bin Zhou,
2015,
Journal of Virology.
Yi Guan,
Yu Zhang,
Chi Ma,
2015,
Nature.
Edward C Holmes,
E. Holmes,
E. Gould,
2003,
The Journal of general virology.
C. Viboud,
E. Holmes,
A. Vincent,
2014,
Journal of Virology.
E. Holmes,
R. Phillips,
P. Goulder,
2005,
Journal of Virology.
Edward C. Holmes,
Oliver G. Pybus,
O. Pybus,
2004,
Journal of Virology.
John D. Wright,
E. Holmes,
M. Jahnke,
2010,
Journal of Virology.
E. Holmes,
A. Kitchen,
G. Carpi,
2010,
Journal of Molecular Evolution.
Gavin J. D. Smith,
Y. Guan,
E. Holmes,
2009,
Virology.
E. Holmes,
A. Nisalak,
A. Rothman,
2008,
Journal of Virology.
A. Breed,
T. Lam,
E. Holmes,
2021,
bioRxiv.
E. Holmes,
Erin Harvey,
2022,
Nature Reviews Microbiology.
E. Holmes,
Jie Cui,
2012,
Journal of Virology.
E. Holmes,
J. Velasco-Hernández,
R. Danis-Lozano,
2010,
Archives of Virology.
Edward C. Holmes,
Yoojin Hong,
Kyung Dae Ko,
2008,
Proceedings of the National Academy of Sciences.
E. Holmes,
A. Stephenson,
H. E. Simmons,
2008,
The Journal of general virology.
E. Holmes,
G. Grard,
R. Charrel,
2006,
The Journal of general virology.
E. Holmes,
L. A. Shackelton,
2004,
Trends in microbiology.
O. Pybus,
E. Holmes,
A. Rambaut,
2002,
Systematic biology.
O. Pybus,
E. Holmes,
C. Woelk,
2002,
The Journal of general virology.
E. Holmes,
E. Gould,
M. Gaunt,
1997,
The Journal of general virology.
E. Holmes,
P. Harvey,
S. Nee,
1994,
Bioessays.
Edward C. Holmes,
E. Holmes,
P. Simmonds,
1993,
Nature.
Colin Simpson,
E. Holmes,
A. Sporle,
2021,
Emerging infectious diseases.
E. Holmes,
A. Darling,
M. Fourment,
2017,
BMC Evolutionary Biology.
Timothy B. Stockwell,
T. Stockwell,
T. Lam,
2012,
Ecology letters.
E. Holmes,
R. Phillips,
P. Goulder,
2006,
Journal of Virology.
E. Holmes,
H. van Bakel,
C. Parrish,
2018,
Journal of Virology.
E. Holmes,
T. de Oliveira,
V. Azevedo,
2021,
Emerging infectious diseases.
O. Faye,
E. Holmes,
C. Firth,
2009,
Journal of Virology.
B. Walker,
E. Holmes,
C. Brander,
2001,
Immunology letters.
Michael Worobey,
Edward C. Holmes,
Andrew Rambaut,
2003,
Nature.
T. Lam,
E. Holmes,
I. Pagán,
2018,
Ecology letters.
E. Holmes,
Jie Cui,
Lin‐Fa Wang,
2013,
Virology Journal.
David L. Robertson,
Edward C. Holmes,
Andrew Rambaut,
2001,
Nature.
E. Holmes,
S. Cook,
2006,
Archives of Virology.
E. Holmes,
G. Moureau,
S. Bennett,
2006,
The Journal of general virology.
M. Suchard,
P. Lemey,
M. Shi,
2013,
Virology.
E. Holmes,
A. Read,
R. Mourant,
2018,
Emerging infectious diseases.
E. Holmes,
V. Ward,
S. Duchêne,
2016,
Journal of Virology.
M. Shi,
E. Holmes,
A. Hurt,
2018,
Molecular Ecology.
M. Shi,
E. Holmes,
A. Hurt,
2021,
Virology.
Liang Wang,
E. Holmes,
Hongjie Yu,
2016,
PLoS pathogens.
M. Shi,
E. Holmes,
A. Hurt,
2020,
The ISME Journal.
David K. Smith,
Huachen Zhu,
Y. Guan,
2012,
The Journal of general virology.
Sebastián Duchêne,
Edward C. Holmes,
Simon Y. W. Ho,
2016,
Bioinform..
E. Holmes,
2011,
Cell Host & Microbe.
O. Pybus,
E. Holmes,
A. Rambaut,
2006,
Journal of Virology.
E. Holmes,
H. Brown,
J. Bell,
2017
.
E. Holmes,
J. Radford,
J. Nguyen-Van-Tam,
2001,
AIDS research and human retroviruses.
E. Holmes,
M. Pistello,
J. Neil,
1993,
The Journal of general virology.
E. Holmes,
E. Gould,
G. Grard,
2010
.
E. Holmes,
E. Gould,
G. Grard,
2010,
The Journal of general virology.
E. Holmes,
J. Abrantes,
P. Esteves,
2015,
The Journal of general virology.
E. Holmes,
P. Zanotto,
1998,
Journal of Virology.
Yi Guan,
Timothy B. Stockwell,
Edward C. Holmes,
2011,
Proceedings of the National Academy of Sciences.
M. Shi,
E. Holmes,
N. Lo,
2019,
Virus evolution.
M. Shi,
E. Holmes,
A. Hurt,
2018,
bioRxiv.
D. W. Kim,
E. Holmes,
J. Farrar,
2012,
Nature Genetics.
E. Holmes,
S. Hafenstein,
C. Parrish,
2015,
Journal of Virology.
E. Holmes,
A. Kitchen,
P. Kerr,
2009,
Journal of Virology.
E. Holmes,
A. Kitchen,
P. Kerr,
2009
.
E. Holmes,
E. Ghedin,
R. Ashley,
2016,
Journal of Virology.
E. Holmes,
Yong‐Zhen Zhang,
2014,
Infection, Genetics and Evolution.
E. Holmes,
Ming-hui Li,
A. Plyusnin,
2013,
PLoS neglected tropical diseases.
E. Holmes,
C. Moritz,
John-Sebastian Eden,
2020,
bioRxiv.
E. Holmes,
J. Buchmann,
Justine Charon,
2022,
bioRxiv.
E. Holmes,
C. Parrish,
W. Weichert,
2019,
Journal of Virology.
E. Holmes,
J. Geoghegan,
M. Wille,
2020,
bioRxiv.
E. Holmes,
Yan-Mei Chen,
Jun-hua Tian,
2022,
Nature Microbiology.
P H Harvey,
E. Holmes,
A. Rambaut,
1995,
Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
P H Harvey,
O. Pybus,
E. Holmes,
1999,
Molecular biology and evolution.
Jiang Fan,
Cecile Viboud,
Edward C. Holmes,
2010,
Journal of Virology.
C. Viboud,
T. Lam,
E. Holmes,
2013,
Journal of Virology.
Timothy B. Stockwell,
T. Stockwell,
C. Viboud,
2009,
PLoS currents.
E. Holmes,
A. Darling,
M. Fourment,
2016,
bioRxiv.
E. Holmes,
J. Mahar,
R. Hall,
2021,
bioRxiv.
E. Holmes,
A. Read,
D. Peacock,
2017,
Journal of Virology.
E. Holmes,
J. Mahar,
R. Hall,
2015,
Emerging infectious diseases.
T. Lam,
C. Hon,
O. Pybus,
2013,
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
Gavin J. D. Smith,
E. Holmes,
M. F. Boni,
2012,
Gene.
E. Holmes,
Rubing Chen,
2008,
Journal of Molecular Evolution.
Edward C. Holmes,
David W. Smith,
Glenys Chidlow,
2015,
PLoS neglected tropical diseases.
E. Holmes,
J. Dunham,
J. C. Stack,
2012,
The Journal of general virology.
Multiple Introductions of the Old World Begomovirus Tomato yellow leaf curl virus into the New World
E. Holmes,
S. Duffy,
2007,
Applied and Environmental Microbiology.
M. Shi,
E. Holmes,
M. Carrai,
2022,
Transboundary and emerging diseases.
J. A. Patino-Galindo,
P. Sorger,
Y. Guan,
2020,
Genome Medicine.
E. Holmes,
J. Geoghegan,
J. Le Pendu,
2014,
Virology.
E. Holmes,
A. Osterhaus,
R. Fouchier,
2008,
The Journal of general virology.
E. Holmes,
G. Ebel,
L. Kramer,
2006,
Journal of Virology.
Colin Simpson,
E. Holmes,
A. Sporle,
2021,
Emerging Infectious Diseases.
E. Holmes,
Juan Li,
Tao Hu,
2023,
Microbiome.
E. Holmes,
A. Rambaut,
P. Bollyky,
1998
.
Edward C. Holmes,
E. Holmes,
C. Woelk,
2001,
Journal of Molecular Evolution.
Edward C. Holmes,
Sarah E. Perkins,
Eleca J. Dunham,
2009,
Journal of Virology.
E. Holmes,
C. Parrish,
E. Dubovi,
2012,
Journal of Virology.
Martin C J Maiden,
Edward C Holmes,
E. Holmes,
2002,
Molecular biology and evolution.
E. Holmes,
S. Ellis,
1999,
Journal of Molecular Evolution.
E. Holmes,
M. Worobey,
C. Woelk,
2001,
Molecular biology and evolution.
E. Holmes,
2014,
Proceedings of the National Academy of Sciences.
E. Holmes,
T. Schlub,
2020,
Virus evolution.
E. Holmes,
Jie Cui,
Xiaoman Wei,
2019,
bioRxiv.
E. Holmes,
Jie Cui,
Xiaoman Wei,
2018,
bioRxiv.
E. Holmes,
Shuyi Zhang,
Jie Cui,
2012,
The Journal of general virology.
Edward C. Holmes,
V. Proutski,
E. Holmes,
1998,
Bioinform..
E. Holmes,
M. Maiden,
M. Maiden,
1999,
Molecular biology and evolution.
E. Holmes,
D. Irwin,
Yongyi Shen,
2021,
Journal of General Virology.
Cécile Viboud,
David J. Lipman,
Mark A. Miller,
2006
.
M. Shi,
E. Holmes,
J. Beatty,
2018,
Viruses.
E. Holmes,
D. Dwyer,
J. Kok,
2020,
PloS one.
C. M. Saad-Roy,
Rachel E. Baker,
O. Pybus,
2021,
medRxiv.
E. Holmes,
B. Oliver,
Ci-xiu Li,
2021,
Transplantation.
E. Holmes,
D. Scaravelli,
M. Gastaldelli,
2018,
Infection, Genetics and Evolution.
E. Holmes,
Justine Charon,
R. French,
2022,
bioRxiv.
E. Holmes,
J. Meers,
P. Young,
2016,
Journal of Virology.
E. Holmes,
S. Duchêne,
J. Bohlin,
2022,
Open Forum Infectious Diseases.
E. Holmes,
A. Stephenson,
H. E. Simmons,
2011,
Virus research.
M. Shi,
E. Holmes,
F. C. Leung,
2013,
Journal of Virology.
E. Holmes,
E. Dubovi,
J. Scarlett,
2014
.
E. Holmes,
C. Parrish,
T. Chambers,
2023,
bioRxiv.
E. Holmes,
V. Ward,
J. Mahar,
2017,
Applied and Environmental Microbiology.
E. Holmes,
P. Zanotto,
Elcio de S Leal,
2004,
Virology.
E. Holmes,
M. Baguelin,
P. Kellam,
2012,
PLoS pathogens.
E. Holmes,
P. Elsworth,
J. Kovaliski,
2014,
Virology.
E. Holmes,
J. Geoghegan,
D. Dwyer,
2018
.
M. Shi,
E. Holmes,
J. Taubenberger,
2012,
Journal of virology.
D. Lipman,
E. Holmes,
J. Yewdell,
2006,
Science.
E. Holmes,
J. Geoghegan,
Erin Harvey,
2022,
Viruses.
E. Holmes,
T. Sorrell,
Vanessa R. Marcelino,
2020,
BMC Genomics.
Amy L. Vincent,
Edward C. Holmes,
E. Holmes,
2012,
Journal of Virology.
M. Suchard,
C. Viboud,
T. Lam,
2011
.
E. Holmes,
Elizabeth R Chare,
E. R. Chare,
2006,
Archives of Virology.
E. Holmes,
Fan Wu,
Su Zhao,
2020,
Nature.
E. Holmes,
2016,
Cell host & microbe.
Evolutionary Dynamics of Multiple Sublineages of H5N1 Influenza Viruses in Nigeria from 2006 to 2008
E. Holmes,
M. Nelson,
I. Monne,
2010,
Journal of Virology.
Timothy B. Stockwell,
Kimberly C. Brouwer,
T. Stockwell,
2011,
Journal of Virology.
E. Holmes,
2014,
PLoS Biology.
E. Holmes,
Jie Cui,
Yane Jia,
2017,
Journal of Virology.
H. R. Prendeville,
E. Holmes,
G. Munkvold,
2015,
Plant disease.
E. Holmes,
Jie Cui,
A. Nielsen,
2012,
Emerging infectious diseases.
Sergei L. Kosakovsky Pond,
E. Holmes,
R. Goldstein,
2020,
Molecular biology and evolution.
Edward C. Holmes,
Geoffrey P. Garnett,
E. Holmes,
1996
.
E. Holmes,
R. Harcourt,
J. Geoghegan,
2018,
Viruses.
E. Holmes,
J. Meers,
M. Carrai,
2019,
Viruses.
M. Shi,
E. Holmes,
A. Hurt,
2019,
bioRxiv.
M. Shi,
E. Holmes,
A. Hurt,
2019
.
E. Holmes,
Jie Cui,
2012,
The Journal of general virology.
E. Holmes,
C. Woelk,
D. McKeever,
2000,
Immunogenetics.
E. Holmes,
C. Sikazwe,
D. Dwyer,
2023,
Viruses.
M. Shi,
E. Holmes,
Y. Hu,
2022,
PLoS pathogens.
E. Holmes,
A. Nisalak,
S. Kalayanarooj,
2007,
American Journal of Tropical Medicine and Hygiene.
T. Scott,
E. Holmes,
A. Nisalak,
2012,
PLoS Neglected Tropical Diseases.
E. Holmes,
2004,
Science.
M. Shi,
E. Holmes,
A. Hoffmann,
2021,
bioRxiv.
O. Faye,
M. Fernandez-Garcia,
E. Holmes,
2017,
The New England journal of medicine.
Cecile Viboud,
Mark A. Miller,
Edward C Holmes,
2014,
The Journal of infectious diseases.
E. Holmes,
Y. Hu,
Su Zhao,
2020,
Nature.
Timothy B. Stockwell,
T. Stockwell,
E. Holmes,
2015,
Emerging infectious diseases.
C. Viboud,
T. Lam,
E. Holmes,
2013,
The Journal of infectious diseases.
M. Shi,
E. Holmes,
T. Schlub,
2018,
Proceedings of the Royal Society B: Biological Sciences.
E. Holmes,
H. Kelly,
I. Barr,
2015,
PLoS pathogens.
E. Holmes,
E. Gould,
T. Gritsun,
1999,
Virus research.
E. Holmes,
J. J. Hayward,
C. Parrish,
2021,
Journal of evolutionary biology.
E. Holmes,
J. J. Hayward,
C. Parrish,
2020,
bioRxiv.
Edward C Holmes,
E. Holmes,
Rubing Chen,
2009,
Virology.
E. Holmes,
C. Firth,
I. Pagán,
2010,
Journal of Molecular Evolution.
E. Holmes,
C. Parrish,
P. Murcia,
2014
.
David K. Smith,
Huachen Zhu,
Y. Guan,
2023,
Journal of virology.
Edward C. Holmes,
Joanne E. Russell,
E. Holmes,
2004,
Infection and Immunity.
E. Holmes,
J. Mahar,
Erin Harvey,
2023,
bioRxiv.
E. Holmes,
A. Rambaut,
K. Andersen,
2018,
Nature.
Nikki E. Freed,
Nuno R. Faria,
M. Koopmans,
2021,
Wellcome open research.
E. Holmes,
K. McColl,
A. Sunarto,
2016,
Virology Journal.
O. Pybus,
E. Holmes,
L. du Plessis,
2021,
Nature Microbiology.
Mark M. Tanaka,
E. Holmes,
M. F. Boni,
2014,
Virology.
E. Holmes,
N. Davis-Poynter,
H. Farrell,
2007,
The Journal of general virology.
M. Shi,
E. Holmes,
Ming-hui Li,
2015,
Virology.
E. Holmes,
D. Bellwood,
J. Geoghegan,
2021,
Virus evolution.
E. Holmes,
S. Hafenstein,
C. Parrish,
2023,
Journal of virology.
E. Holmes,
S. Hafenstein,
C. Parrish,
2023,
bioRxiv.
E. Holmes,
J. Ball,
M. Müller,
2019,
Viruses.
Y. P. Chen,
E. Holmes,
D. vanEngelsdorp,
2008,
Journal of Virology.
T. Scott,
E. Holmes,
A. Nisalak,
2013
.
Edward C. Holmes,
V. Proutski,
E. Holmes,
1996,
Comput. Appl. Biosci..
E. Holmes,
A. Iwasaki,
A. Ko,
2023,
Genome biology and evolution.
M. Shi,
E. Holmes,
Jun-hua Tian,
2015
.
E. Holmes,
James C. Kile,
C. Parrish,
2023,
bioRxiv.
Co-circulation of Hantaan, Kenkeme, and Khabarovsk Hantaviruses in Bolshoy Ussuriysky Island, China.
E. Holmes,
Ming-hui Li,
Ming Li,
2014,
Virus research.
E. Holmes,
Wen Wang,
Xian-dan Lin,
2014,
Virus research.
M. Shi,
E. Holmes,
G. Baele,
2023,
Cell.
Alice C Hughes,
E. Holmes,
Juan Li,
2020,
bioRxiv.
Mark M. Tanaka,
E. Holmes,
R. Chisholm,
2017,
Virus evolution.
Cecile Viboud,
David J Lipman,
Elodie Ghedin,
2006,
PLoS Pathogens.
E. Holmes,
J. Geoghegan,
P. Tortosa,
2023,
bioRxiv.
E. Holmes,
R. Andino,
C. Parrish,
2014,
PLoS Pathogens.
E. Holmes,
S. Duchêne,
2018,
Virus evolution.
E. Holmes,
M. Cáccamo,
B. Grenfell,
2012,
PLoS pathogens.
E. Holmes,
C. Rice,
P. Simmonds,
1994,
Hepatology.
M. Shi,
E. Holmes,
M. Carrai,
2021,
Viruses.
E. Holmes,
C. Parrish,
E. Dubovi,
2022
.
Emergence, continuity, and evolution of Yersinia pestis throughout medieval and early modern Denmark
E. Holmes,
G. B. Golding,
J. Boldsen,
2023,
Current Biology.
M. Shi,
E. Holmes,
D. Guo,
2023,
Nature communications.
E. Holmes,
Z. Memish,
J. Nguyen-Van-Tam,
2014,
Journal of Epidemiology and Global Health.
Danna R. Gifford,
M. DePristo,
R. Lenski,
2022
.
M. Shi,
E. Holmes,
Yiyu Lu,
2020,
Scientific Reports.
E. Holmes,
E. Ghedin,
D. Spiro,
2010,
Journal of Virology.
E. Holmes,
M. Fourment,
2016,
BMC Research Notes.
M. Shi,
E. Holmes,
Bo Li,
2022,
bioRxiv.
E. Holmes,
Wen Wang,
Xian-dan Lin,
2020,
bioRxiv.
E. Holmes,
P. Calistri,
I. Mangone,
2021,
medRxiv.
M. Shi,
E. Holmes,
A. Hurt,
2020,
bioRxiv.
M. Shi,
E. Holmes,
Wen Wang,
2018,
Nature.
M. Shi,
E. Holmes,
M. Stott,
2023,
Virology.
M. Shi,
E. Holmes,
Jun-hua Tian,
2023,
bioRxiv.
E. Holmes,
P. Calistri,
F. Di Giallonardo,
2022,
Viruses.
E. Holmes,
A. Mooers,
Mooers,
2000,
Trends in ecology & evolution.
M. Shi,
E. Holmes,
M. Carrai,
2020,
Viruses.
E. Holmes,
P. Zanotto,
C. Romano,
2007,
PloS one.
S. F. Aguiar,
D. L. Mascarenhas,
Nuno R. Faria,
2017,
Nature.
M. Shi,
E. Holmes,
Yan Peng,
2021,
medRxiv.
E. Holmes,
J. Geoghegan,
K. Morgan,
2023,
bioRxiv.
Michael N Romanov,
D. Haussler,
Huanming Yang,
2014
.
Edward C. Holmes,
Geoffrey P. Garnett,
E. Holmes,
1998
.
E. Holmes,
Wen Wang,
Jun-hua Tian,
2018,
Nature.
Thomson,
Pickard,
E. Holmes,
2018
.
Timothy B. Stockwell,
E. Holmes,
A. Vincent,
2012,
The Journal of general virology.
E. Holmes,
A. Vincent,
M. Gramer,
2012,
Journal of Virology.
E. Holmes,
T. Sorrell,
Vanessa R. Marcelino,
2020,
BMC Genomics.
E. Holmes,
J. Peiris,
L. Poon,
2019,
Nature Genetics.
E. Holmes,
F. Di Giallonardo,
S. Duchêne,
2016,
Molecular biology and evolution.
Rachel S. G. Sealfon,
Pardis C Sabeti,
Merle L. Gilbert,
2017,
Nature.
E. Holmes,
Ana T. Duggan,
L. Ventura,
2023,
PLoS pathogens.
E. Holmes,
D. Bellwood,
J. Geoghegan,
2021,
Virus evolution.
E. Holmes,
W. Salzburger,
Erin Harvey,
2023,
bioRxiv.
E. Holmes,
2016,
Journal of Virology.
David K. Smith,
Huachen Zhu,
Y. Guan,
2016,
Science.
M. Suchard,
P. Lemey,
E. Holmes,
2013,
Virology.
Jan P. Buchmann,
Edward C. Holmes,
E. Holmes,
2020,
Bioinform..
Jan P Buchmann,
Edward C Holmes,
E. Holmes,
2019,
Bioinform..
Mark M. Tanaka,
E. Holmes,
M. F. Boni,
2014,
Virology.
E. Holmes,
T. Vaughan,
F. Di Giallonardo,
2021,
Methods in Ecology and Evolution.
E. Holmes,
Lei Shi,
Fan Wu,
2020,
Virologica Sinica.
E. Holmes,
L. Gresh,
S. Kashima,
2023,
Emerging infectious diseases.
S. Ritchie,
T. Scott,
E. Holmes,
2015,
The Lancet. Infectious diseases.
E. Holmes,
Yan-Mei Chen,
Jun-hua Tian,
2021,
SSRN Electronic Journal.
M. Altfeld,
B. Walker,
E. Holmes,
2004,
The Journal of experimental medicine.
E. Holmes,
J. Geoghegan,
T. Ingram,
2023,
bioRxiv.
E. Holmes,
R. Harcourt,
J. Geoghegan,
2018,
Viruses.
E. Holmes,
M. Giovanetti,
F. Pinotti,
2023,
Science advances.
Timothy B. Stockwell,
Gavin J. D. Smith,
Y. Guan,
2011,
Proceedings of the National Academy of Sciences.
E. Holmes,
I. Pagán,
E. Simon-Lorière,
2012,
Journal of Virology.
E. Holmes,
S. Taylor-Robinson,
H. Reeves,
2018
.
O. Pybus,
E. Holmes,
A. Rambaut,
2001,
Nature.
E. Holmes,
John-Sebastian Eden,
A. Porter,
2019,
Viruses.
Bryan T Grenfell,
Edward C Holmes,
E. Holmes,
2005,
Science.
E. Holmes,
C. Parrish,
K. Hoelzer,
2008,
The Journal of general virology.
E. Holmes,
P. Walker,
S. Davis,
2013,
Journal of Virology.
M. Suchard,
C. Viboud,
T. Lam,
2011,
PLoS pathogens.
E. Holmes,
I. Monne,
A. Fusaro,
2011,
Journal of Virology.
E. Holmes,
A. Darling,
S. Djordjevic,
2023,
Microbiome.