P. Dobson

发表

Distinguishing enzyme structures from non-enzymes without alignments.

P. Dobson, A. Doig, 2003, Journal of molecular biology.

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

Markus J. Herrgård, Monica L. Mo, D. Broomhead, 2008, Nature Biotechnology.

The promiscuous binding of pharmaceutical drugs and their transporter-mediated uptake into cells: what we (need to) know and how we can do so.

D. Kell, S. Oliver, P. Dobson, 2013, Drug discovery today.

A community-driven global reconstruction of human metabolism

Ronan M. T. Fleming, Jason A. Papin, Sarah M. Keating, 2013, Nature Biotechnology.

Carrier-mediated cellular uptake of pharmaceutical drugs: an exception or the rule?

D. Kell, P. Dobson, 2008, Nature Reviews Drug Discovery.

The cellular uptake of pharmaceutical drugs is mainly carrier-mediated and is thus an issue not so much of biophysics but of systems biology

D. Kell, P. Dobson, 2009 .

'Metabolite-likeness' as a criterion in the design and selection of pharmaceutical drug libraries.

D. Kell, P. Dobson, Y. Patel, 2009, Drug discovery today.

Predicting enzyme class from protein structure without alignments.

P. Dobson, A. Doig, 2005, Journal of molecular biology.

Implications of the dominant role of transporters in drug uptake by cells.

Douglas B Kell, Stephen G Oliver, Karin Lanthaler, 2009, Current topics in medicinal chemistry.

Pharmaceutical drug transport: the issues and the implications that it is essentially carrier-mediated only.

Douglas B Kell, Stephen G Oliver, Paul D Dobson, 2011, Drug discovery today.

Length preferences and periodicity in beta-strands. Antiparallel edge beta-sheets are more likely to finish in non-hydrogen bonded rings.

P. Dobson, A. Doig, S. Penel, 2003, Protein engineering.

Length preferences and periodicity in β‐strands. Antiparallel edge β‐sheets are more likely to finish in non‐hydrogen bonded rings

P. Dobson, A. Doig, S. Penel, 2003 .

Mining metabolites: extracting the yeast metabolome from the literature

Sophia Ananiadou, Douglas B. Kell, Chikashi Nobata, 2010, Metabolomics.

WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series

Rob Jelier, Janna Hastings, Christoph Kaleta, 2017, Worm.

A Simple Approach to Normalization for Spectroscopic Data Mining

P. Dobson, A. Doig, E. Blanch, 2005, Applied spectroscopy.

Recon 2.2: from reconstruction to model of human metabolism

Neil Swainston, Douglas B. Kell, Nathan E. Lewis, 2016, Metabolomics.

Genome-wide assessment of the carriers involved in the cellular uptake of drugs: a model system in yeast

Douglas B Kell, Stephen G Oliver, Elizabeth Bilsland, 2011, BMC Biology.

Biotechnological conversion of methane to methanol: evaluation of progress and potential

P. Dobson, J. Pandhal, Charlotte E. Bjorck, 2018 .

Mass Spectrometry Tools and Metabolite-specific Databases for Molecular Identification in Metabolomics

D. Kell, R. Goodacre, P. Dobson, 2009 .

Data Management in Computational Systems Biology: Exploring Standards, Tools, Databases, and Packaging Best Practices.

Carole Goble, Dagmar Waltemath, Michael Hucka, 2019, Methods in molecular biology.

Integration of metabolic databases for the reconstruction of genome-scale metabolic networks

Neil Swainston, Yoshimasa Tsuruoka, Jean-Marc Schwartz, 2010, BMC Systems Biology.

Cell function profiling to assess clone stability

P. Dobson, D. James, Carolanne Doherty, 2020, Biotechnology and bioengineering.

PubTree: A Hierarchical Search Tool for the MEDLINE Database pdf

William Rowe, Bede Constantinides, Paul D. Dobson, 2017, ArXiv.

Further developments towards a genome-scale metabolic model of yeast

Neil Swainston, Douglas B. Kell, Chuan Lu, 2010, BMC Systems Biology.

biochem4j: Integrated and extensible biochemical knowledge through graph databases

Sophia Ananiadou, Pablo Carbonell, Alan R. Williams, 2017, PloS one.

Text mining meets workflow: linking U-Compare with Taverna.

Sophia Ananiadou, Jun'ichi Tsujii, Yoshinobu Kano, 2010, Bioinformatics.

Engineering Pathways in Central Carbon Metabolism Help to Increase Glycan Production and Improve N-Type Glycosylation of Recombinant Proteins in E. coli

P. Dobson, P. Wright, J. Pandhal, 2019, Bioengineering.

Reconstruction of an in silico metabolic model of Arabidopsis thaliana through database integration

Neil Swainston, Yoshimasa Tsuruoka, Jean-Marc Schwartz, 2009 .

Prediction of protein function in the absence of significant sequence similarity.

Yu-Dong Cai, Paul D Dobson, P. Dobson, 2004, Current medicinal chemistry.

The Band Assignment Parser: A Tool to Identify Band Assignments in Research Publications

Paul D Dobson, Ewan W Blanch, P. Dobson, 2007, Applied spectroscopy.