N. Borisov

发表

Mathematical Justification of Expression-Based Pathway Activation Scoring (PAS).

A. Aliper, A. Zhavoronkov, A. Buzdin, 2017, Methods in molecular biology.

Bioinformatics Meets Biomedicine: OncoFinder, a Quantitative Approach for Interrogating Molecular Pathways Using Gene Expression Data.

A. Zhavoronkov, A. Buzdin, N. Borisov, 2017, Methods in molecular biology.

Handling Complex Rule-Based Models of Mitogenic Cell Signaling (on the Example of ERK Activation upon EGF Stimulation)

N. Kuzmina, N. Borisov, 2011 .

Domain-oriented reduction of rule-based network models.

B. Kholodenko, N. Borisov, A. S. Chistopol'sky, 2008, IET systems biology.

Scaffolding Protein Grb2-associated Binder 1 Sustains Epidermal Growth Factor-induced Mitogenic and Survival Signaling by Multiple Positive Feedback Loops*

Boris N Kholodenko, Anatoly Kiyatkin, Jan B Hoek, 2006, Journal of Biological Chemistry.

Novel robust biomarkers for human bladder cancer based on activation of intracellular signaling pathways

Nikolay M. Borisov, Sergey A. Roumiantsev, Ksenia Lezhnina, 2014, Oncotarget.

Signaling through receptors and scaffolds: independent interactions reduce combinatorial complexity.

B. Kholodenko, N. Borisov, J. Hoek, 2005, Biophysical journal.

Systems-level interactions between insulin–EGF networks amplify mitogenic signaling

Jens Timmer, Thomas Maiwald, Jan Berkhout, 2009, Molecular systems biology.

Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains.

Boris N Kholodenko, Jan B Hoek, B. Kholodenko, 2006, Bio Systems.

In silico Pathway Activation Network Decomposition Analysis (iPANDA) as a method for biomarker development

A. Aliper, Ksenia V Lezhnina, A. Zhavoronkov, 2016, Nature Communications.

Molecular Pathway Analysis of Mutation Data for Biomarkers Discovery and Scoring of Target Cancer Drugs.

M. Sorokin, A. Garazha, A. Buzdin, 2020, Methods in molecular biology.

Pathway Instability Is an Effective New Mutation-Based Type of Cancer Biomarkers

M. Sorokin, A. Buzdin, N. Borisov, 2019, Front. Oncol..

The Method for Analysis of Expression Data Homogeneity Based On the Student Test

N. Borisov, R. Aliev, 2018 .

MiRImpact as a Methodological Tool for the Analysis of MicroRNA at the Level of Molecular Pathways

A. Buzdin, N. Borisov, 2019, Handbook of Nutrition, Diet, and Epigenetics.

Oncofinder, a new method for the analysis of intracellular signaling pathway activation using transcriptomic data

Nikolay M. Borisov, Mikhail B. Korzinkin, A. Zhavoronkov, 2014, Front. Genet..

MiRImpact, a new bioinformatic method using complete microRNA expression profiles to assess their overall influence on the activity of intracellular molecular pathways

N. Gaifullin, A. Zhavoronkov, A. Buzdin, 2016, Cell cycle.

Signaling pathway cloud regulation for in silico screening and ranking of the potential geroprotective drugs

Nikolay M. Borisov, Alex Zhavoronkov, A. Zhavoronkov, 2014, Front. Genet..

Early stage of cytomegalovirus infection suppresses host microRNA expression regulation in human fibroblasts

M. Suntsova, M. Sorokin, A. Garazha, 2016, Cell cycle.

Silencing AML1-ETO gene expression leads to simultaneous activation of both pro-apoptotic and proliferation signaling

A M Aliper, A. Garazha, A. Aliper, 2014, Leukemia.

Pathway Based Analysis of Mutation Data Is Efficient for Scoring Target Cancer Drugs

Nikolay M. Borisov, Maxim I. Sorokin, M. Sorokin, 2019, Front. Pharmacol..

Signaling pathways activation profiles make better markers of cancer than expression of individual genes

Nikolay M. Borisov, A. Aliper, Mikhail B. Korzinkin, 2014, Oncotarget.

Individual Drug Treatment Prediction in Oncology Based on Machine Learning Using Cell Culture Gene Expression Data

Nikolay Borisov, Victor Tkachev, Anton Buzdin, 2017, ICCBB.

The OncoFinder algorithm for minimizing the errors introduced by the high-throughput methods of transcriptome analysis

Nikolay M. Borisov, Sergey A. Roumiantsev, A. Aliper, 2014, Front. Mol. Biosci..

Clinical use of RNA sequencing and oncobox analytics to predict personalized targeted therapeutic efficacy.

M. Suntsova, M. Sorokin, A. Garazha, 2020 .

RNA sequencing analysis for profiling activation of cancer-associated molecular pathways.

M. Suntsova, M. Sorokin, A. Garazha, 2019, Journal of Clinical Oncology.

Molecular Systems Biology 5; Article number 256; doi:10.1038/msb.2009.19 Citation: Molecular Systems Biology 5:256

B. Kholodenko, N. Borisov, T. Maiwald, 2022 .

Systems-level interactions between insulin–EGF networks amplify mitogenic signaling

B. Kholodenko, N. Borisov, T. Maiwald, 2009, Molecular systems biology.

Novel robust biomarkers for human bladder cancer based on activation of intracellular signaling pathways

O. Kovalchuk, A. Aliper, N. Gaifullin, 2014, Oncotarget.