C. Ucla

发表

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

William Stafford Noble, Nancy R. Zhang, Stephen C. J. Parker, 2007, Nature.

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

Colin N. Dewey, Paul E. Boardman, David D. Shteynberg, 2004, Nature.

Initial sequencing and comparative analysis of the mouse genome.

Colin N. Dewey, Simon C. Potter, James A. Cuff, 2002 .

EGASP: the human ENCODE Genome Annotation Assessment Project

E. Birney, M. Ashburner, S. Lewis, 2006, Genome Biology.

A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

Raymond K. Auerbach, William Stafford Noble, Stephen C. J. Parker, 2011, PLoS biology.

GENCODE: producing a reference annotation for ENCODE

J. Harrow, A. Frankish, J. Chrast, 2006, Genome Biology.

Evolutionary Discrimination of Mammalian Conserved Non-Genic Sequences (CNGs)

Alexandre Reymond, Emmanouil T Dermitzakis, E. Kirkness, 2003, Science.

RFX1, a transactivator of hepatitis B virus enhancer I, belongs to a novel family of homodimeric and heterodimeric DNA-binding proteins

C. Ucla, B. Durand, W. Reith, 1994, Molecular and cellular biology.

Structured Rnas in the Encode Selected Regions of the Human Genome

M. Gerstein, Andrea Tanzer, A. Reymond, 2022 .

Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes

M. Brent, A. Reymond, R. Guigó, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions.

Charlotte N. Henrichsen, J. Harrow, A. Frankish, 2007, Genome research.

Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2012, PloS one.

Nineteen additional unpredicted transcripts from human chromosome 21.

C. V. Jongeneel, Christian Iseli, Brian J. Stevenson, 2002, Genomics.

Identification of additional transcripts in the Williams-Beuren syndrome critical region

Alexandre Reymond, Giuseppe Merla, A. Reymond, 2002, Human Genetics.

RFX1, a transactivator of hepatitis B virus enhancer I, belongs to a novel family of homodimeric and heterodimeric DNA-binding proteins

C. Ucla, B. Durand, W. Reith, 1994 .

Hybrid simulations of a parallel collisionless shock in the large plasma device

F. Jenko, C. Ucla, Lanl, 2016, 1611.06281.

Molecular cloning of glucokinase cDNA. Developmental and dietary regulation of glucokinase mRNA in rat liver.

C. Ucla, B. Mach, P. Iynedjian, 1987, The Journal of biological chemistry.

EGASP: the human ENCODE Genome Annotation Assessment

E. Birney, M. Ashburner, S. Lewis, 2015 .

Interferon-α-Induced Endogenous Superantigen: A Model Linking Environment and Autoimmunity

C. Ucla, B. Conrad, S. Marguerat, 2001 .

Interferon-alpha-induced endogenous superantigen. a model linking environment and autoimmunity.

C. Ucla, B. Conrad, S. Marguerat, 2001, Immunity.

Sequence Analysis of the DRw13 β Chain Genes:: The Dw19 Specificity May Be Encoded by the DRB3 Locus

C. Ucla, B. Mach, J. Gorski, 1989 .

Interferon gamma drastically modifies the regulation of interleukin 1 genes by endotoxin in U937 cells.

C. Ucla, B. Mach, S. Fey, 1990, The Journal of clinical investigation.

Materials and Methods Briefdefinitive Report Correlation of Structure with T Cell Responses of the Three Members of the Hla-drw52 Allelic Series

C. Ucla, B. Mach, J. Gorski, 2022 .

Two novel mutations in the MHC class II transactivator CIITA in a second patient from MHC class II deficiency complementation group A

C. Ucla, B. Mach, M. Eibl, 1997, Human Genetics.

Induction of human interleukin 1 mRNA measured by collagenase‐ and prostaglandin E2‐stimulating activity in rheumatoid synovial cells

C. Ucla, B. Mach, J. Dayer, 1984, European journal of immunology.

Differential expression and regulation of the glucokinase gene in liver and islets of Langerhans.

C. Ucla, C. Newgard, T. Nouspikel, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Human chromosome 21 gene expression atlas in the mouse

Gregor Eichele, Stylianos E. Antonarakis, Emmanouil T. Dermitzakis, 2002, Nature.

Evolutionary Comparison Provides Evidence for Pathogenicity of RMRP Mutations

A. Reymond, E. Dermitzakis, C. Ucla, 2005, PLoS genetics.

genome Structured RNAs in the ENCODE selected regions of the human Related Content

M. Gerstein, Andrea Tanzer, A. Reymond, 2007 .

Efficient targeted transcript discovery via array-based normalization of RACE libraries

Sylvain Foissac, Philipp Kapranov, Thomas R. Gingeras, 2008, Nature Methods.

Islands of euchromatin-like sequence and expressed polymorphic sequences within the short arm of human chromosome 21.

Antony V. Cox, E. Eichler, A. Reymond, 2007, Genome research.

From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map.

A. Reymond, C. Ucla, C. N. Henrichsen, 2001, Genomics.

Disease-Causing 7.4 kb Cis-Regulatory Deletion Disrupting Conserved Non-Coding Sequences and Their Interaction with the FOXL2 Promotor: Implications for Mutation Screening

Stylianos E. Antonarakis, Filip Pattyn, Frank Speleman, 2009, PLoS genetics.

The Transcription Factor RFX3 Directs Nodal Cilium Development and Left-Right Asymmetry Specification

C. Ucla, B. Durand, W. Reith, 2004, Molecular and Cellular Biology.

The genes for MHC class II regulatory factors RFX1 and RFX2 are located on the short arm of chromosome 19.

R Berger, C. Ucla, W. Reith, 1992, Genomics.

Numerous potentially functional but non-genic conserved sequences on human chromosome 21

C. V. Jongeneel, Stylianos E. Antonarakis, Emmanouil T. Dermitzakis, 2002, Nature.

Analysis of HLA-D micropolymorphism by a simple procedure: RNA oligonucleotide hybridization.

C. Ucla, B. Mach, J. Gorski, 1987, The Journal of clinical investigation.

Transcriptional and post-transcriptional profile of human chromosome 21.

C. Ucla, S. Antonarakis, S. Nikolaev, 2009, Genome research.

Complementation of the DNA repair defect in xeroderma pigmentosum group G cells by a human cDNA related to yeast RAD2

A. Bairoch, C. Ucla, D. Scherly, 1993, Nature.

Polymorphism and regulation of HLA class II genes of the major histocompatibility complex.

C. Ucla, B. Mach, J. Gorski, 1986, Cold Spring Harbor symposia on quantitative biology.

Efficient repression of endogenous major histocompatibility complex class II expression through dominant negative CIITA mutants isolated by a functional selection strategy

C. Ucla, B. Mach, S. Bontron, 1997, Molecular and cellular biology.

Hybrid simulations of a parallel collisionless shock in the large plasma device

F. Jenko, C. Ucla, Lanl, 2016, 1611.06281.

Dinucleotide repeat polymorphism in the human RFX1 gene.

C. Ucla, B. Mach, I. Kern, 1994, Human Molecular Genetics.

Locations of human and mouse genes encoding the RFX1 and RFX2 transcription factor proteins.

C. Ucla, L. Stubbs, W. Reith, 1996, Genomics.

Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2012, PloS one.

Structured RNAs in the ENCODE selected regions of the human genome.

M. Gerstein, Andrea Tanzer, A. Reymond, 2007, Genome research.

Evidence for transcript networks composed of chimeric RNAs in human cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2017 .

Evidence for transcript networks composed of chimeric RNAs in human cells

Jonathan M. Mudge, J. Harrow, A. Frankish, 2014 .

Evolutionary Comparison Provides Evidence for Pathogenicity of RMRP Mutations

A. Reymond, E. Dermitzakis, C. Ucla, 2005, PLoS genetics.