M. Bieda

发表

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

William Stafford Noble, Nancy R. Zhang, Stephen C. J. Parker, 2007, Nature.

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets.

Mark Gerstein, Kevin Struhl, Zhiping Weng, 2008, Genome research.

Distribution and Patterns of CNSs in a Caenorhabditis Gene Family

C. Webb, M. Bieda, 2004 .

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome.

Mark Bieda, Roland Green, M. Bieda, 2006, Genome research.

Mutation in Folate Metabolism Causes Epigenetic Instability and Transgenerational Effects on Development

M. Bieda, A. Ferguson-Smith, J. Cross, 2013, Cell.

Differences among brain tumor stem cell types and fetal neural stem cells in focal regions of histone modifications and DNA methylation, broad regions of modifications, and bivalent promoters

M. Bieda, Sally Yoo, 2014, BMC Genomics.

Identification of Genes Directly Regulated by the Oncogene ZNF217 Using Chromatin Immunoprecipitation (ChIP)-Chip Assays*

Henriette O'Geen, Victor X Jin, Paul Yaswen, 2007, Journal of Biological Chemistry.

Systematic evaluation of variability in ChIP-chip experiments using data

Jun S. Song, Xiaoqin, Xiao-qin, 2008 .

Identification of genes directly regulated by the oncogene ZNF217 using ChIP-chip assays

M. Bieda, R. Green, P. Farnham, 2007 .

Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes

M. Bieda, P. Farnham, J. LaSalle, 2007, Proceedings of the National Academy of Sciences.

A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members.

Victor X Jin, Mark Bieda, Alina Rabinovich, 2007, Genome research.

Differences among brain tumor stem cell types and fetal neural stem cells in focal regions of histone modifications and DNA methylation, broad regions of modifications, and bivalent promoters

M. Bieda, Sally Yoo, 2014, BMC Genomics.

Reusable, extensible, and modifiable R scripts and Kepler workflows for comprehensive single set ChIP-seq analysis

M. Bieda, T. Kolisnik, N. Cormier, 2016, BMC Bioinformatics.

An inhaled dose of budesonide induces genes involved in transcription and signaling in the human airways: enhancement of anti‐ and proinflammatory effector genes

M. Bieda, M. Kelly, R. Leigh, 2016, Pharmacology research & perspectives.

Analysis of the mechanisms mediating tumor-specific changes in gene expression in human liver tumors.

Mark Bieda, Roland Green, M. Bieda, 2008, Cancer research.

widespread role for E2F1 in the human genome Unbiased location analysis of E2F1-binding sites suggests a

M. Bieda, Xiaoqin Xu, R. Green, 2006 .

N-type and L-type calcium channels mediate glycinergic synaptic inputs to retinal ganglion cells of tiger salamanders

D. Copenhagen, M. Bieda, 2004, Visual Neuroscience.

Sodium action potentials are not required for light-evoked release of GABA or glycine from retinal amacrine cells.

D. Copenhagen, M. Bieda, 1999, Journal of neurophysiology.

YesWorkflow: A User-Oriented, Language-Independent Tool for Recovering Workflow Information from Scripts pdf

Yaxing Wei, James Cheney, Yang Cao, 2015, ArXiv.

Major role for tonic GABAA conductances in anesthetic suppression of intrinsic neuronal excitability.

M. Bieda, M. MacIver, M. Maciver, 2004, Journal of neurophysiology.

Quinine, intracellular pH and modulation of hemi-gap junctions in catfish horizontal cells

D. Copenhagen, D. Dixon, M. Bieda, 1996, Vision Research.

Anesthetics Discriminate Between Tonic and Phasic &ggr;-Aminobutyric Acid Receptors on Hippocampal CA1 Neurons

M. Bieda, M. MacIver, H. Su, 2009, Anesthesia and analgesia.

Identification of Genes Directly Regulated by the Oncogene ZNF217 Using Chromatin Immunoprecipitation (ChIP)-Chip Assays*

M. Bieda, P. Farnham, V. Jin, 2007, Journal of Biological Chemistry.

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome.

M. Bieda, Xiaoqin Xu, P. Farnham, 2006, Genome research.

Slow Diffusion into Brain Slices Decreases the Apparent Potency of an Anesthetic: [2002][A-790]

M. Bieda, B. Maciver, Sky Pittson, 2002 .

Inhibition is not required for the production of transient spiking responses from retinal ganglion cells.

D. Copenhagen, M. Bieda, 2000, Visual neuroscience.

Workflows for microarray data processing in the Kepler environment

Bertram Ludäscher, Timothy M. McPhillips, Thomas Stropp, 2012, BMC Bioinformatics.

Workflows for microarray data processing in the

Bertram Ludäscher, Timothy M. McPhillips, Thomas Stropp, 2012 .

Reusable, extensible, and modifiable R scripts and Kepler workflows for comprehensive single set ChIP-seq analysis

Mark Bieda, Tyler Kolisnik, Nathan Cormier, 2016, BMC Bioinformatics.