A. Delaney

发表

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

Allen D. Delaney, Steven J. M. Jones, O. Griffith, 2007, Nature Methods.

Frequent mutation of histone modifying genes in non-Hodgkin lymphoma

Steven J. M. Jones, Shaun D. Jackman, Ryan D. Morin, 2011, Nature.

ARID1A mutations in endometriosis-associated ovarian carcinomas.

Richard A. Moore, S. Fereday, D. Bowtell, 2010, The New England journal of medicine.

Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution

Ryan D. Morin, Richard A. Moore, Trevor J Pugh, 2009, Nature.

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells.

Ryan D. Morin, Allen D. Delaney, M. Marra, 2008, Genome research.

BMC Genomics BioMed Central Methodology article

Steven J. M. Jones, Malachi Griffith, Thomas Zeng, 2006 .

Next-generation tag sequencing for cancer gene expression profiling.

Ryan D. Morin, Allen D. Delaney, M. Marra, 2009, Genome research.

Alternative expression analysis by RNA sequencing

Steven J. M. Jones, Ryan D. Morin, Trevor J Pugh, 2010, Nature Methods.

Somatic mutation of EZH2 (Y641) in Follicular and Diffuse Large B-cell Lymphomas of Germinal Center Origin

Ryan D. Morin, Richard A. Moore, Allen D. Delaney, 2010, Nature Genetics.

Mutation Discovery in Regions of Segmental Cancer Genome Amplifications with CoNAn-SNV: A Mixture Model for Next Generation Sequencing of Tumors

Allen D. Delaney, M. Marra, M. Hirst, 2012, PloS one.

Epigenetic and transcriptional determinants of the human breast

Malachi Griffith, Michael T. McManus, Martin Hirst, 2015, Nature Communications.

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

Michael Q. Zhang, Haussler, Allen D. Delaney, 2010, Nature Biotechnology.

Conserved Role of Intragenic DNA Methylation in Regulating Alternative Promoters

Allen D. Delaney, D. Haussler, M. Marra, 2010, Nature.

LNCaP Atlas: Gene expression associated with in vivo progression to castration-recurrent prostate cancer

Allen D. Delaney, G. Wang, M. Marra, 2010, BMC Medical Genomics.

Oligonucleotide microarray analysis of genomic imbalance in children with mental retardation.

Sarah Barber, Steven J. M. Jones, Martin Krzywinski, 2006, American journal of human genetics.

Transcriptome analysis of the normal human mammary cell commitment and differentiation process.

Marco Marra, Steven McKinney, Samuel Aparicio, 2008, Cell stem cell.

Tumor-associated macrophages and survival in classic Hodgkin's lymphoma.

Steven J. M. Jones, Christian Steidl, Javeed Iqbal, 2010, The New England journal of medicine.

Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines.

Allen D. Delaney, M. Marra, M. Hirst, 2006, Genome research.

Sequence Variant Discovery in DNA Repair Genes from Radiosensitive and Radiotolerant Prostate Brachytherapy Patients

Richard A. Moore, Trevor J Pugh, Allen D. Delaney, 2009, Clinical Cancer Research.

A comparison of MS/MS‐based, stable‐isotope‐labeled, quantitation performance on ESI‐quadrupole TOF and MALDI‐TOF/TOF mass spectrometers

Christoph H Borchers, Monica H. Elliott, Christie L Hunter, 2009, Proteomics.

Enabling Coupled Quantitative Genomics and Proteomics Analyses from Rat Spinal Cord Samples*S

Allen D. Delaney, A. Delaney, J. Coorssen, 2007, Molecular & Cellular Proteomics.

And Discovery in Human Embryonic Stem Cells Application of Massively Parallel Sequencing to Microrna Profiling Material Supplemental

Ryan D. Morin, M. Marra, M. Hirst, 2022 .

Detection of pathogenic copy number variants in children with idiopathic intellectual disability using 500 K SNP array genomic hybridization

Allen D. Delaney, M. Marra, A. Delaney, 2009, BMC Genomics.

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing

Thomas Zeng, Richard Varhol, Martin Hirst, 2008, Nucleic acids research.

Tyrosine 641 of the EZH2 Oncogene Is Frequently Mutated in Follicular and Diffuse Large B-Cell Lymphomas of Germinal Center Origin.

Richard A. Moore, O. Griffith, R. Gascoyne, 2009 .

BMPER variants associated with a novel, attenuated subtype of diaphanospondylodysostosis

A. Delaney, C. Reilly, S. Tredwell, 2015, Journal of Human Genetics.

Prospective isolation and molecular characterization of hematopoietic stem cells with durable self-renewal potential.

Allen D. Delaney, M. Marra, D. Kent, 2009, Blood.

In-depth characterization of the microRNA transcriptome in a leukemia progression model.

Malachi Griffith, Thomas Zeng, Ryan D. Morin, 2008, Genome research.

Novel deletions of 14q11.2 associated with developmental delay, cognitive impairment and similar minor anomalies in three children

Jan M Friedman, Lionel Willatt, Howard Martin, 2007, Journal of Medical Genetics.

A patient with vertebral, cognitive and behavioural abnormalities and a de novo deletion of NRXN1α

J M Friedman, M. Marra, A. Delaney, 2007, Journal of Medical Genetics.

A Male with Unilateral Microphthalmia Reveals a Role for TMX3 in Eye Development

Allen D. Delaney, H. Baier, P. Kwok, 2010, PloS one.

Comprehensive microRNA expression profiling of the hematopoietic hierarchy

Allen D. Delaney, M. Marra, D. Kent, 2010, Proceedings of the National Academy of Sciences.

Retinoblastoma-binding proteins 4 and 9 are important for human pluripotent stem cell maintenance.

Elizabeth D. Wederell, Allen D. Delaney, M. Marra, 2011, Experimental hematology.

LongSAGE profiling of nine human embryonic stem cell lines

Steven J. M. Jones, Ryan D. Morin, Allen D. Delaney, 2007, Genome Biology.

Use of Affymetrix Mapping Arrays in the Diagnosis of Gene Copy Number Variation

M. Marra, A. Delaney, H. Qian, 2008, Current protocols in human genetics.

Single exon-resolution targeted chromosomal microarray analysis of known and candidate intellectual disability genes

M. Marra, A. Delaney, M. Griffith, 2013, European Journal of Human Genetics.

High resolution analysis of follicular lymphoma genomes reveals somatic recurrent sites of copy‐neutral loss of heterozygosity and copy number alterations that target single genes

Allen D. Delaney, R. Gascoyne, J. Connors, 2010, Genes, chromosomes & cancer.

A maternally inherited chromosome 18q22.1 deletion in a male with late‐presenting diaphragmatic hernia and microphthalmia–evaluation of DSEL as a candidate gene for the diaphragmatic defect

Allen D. Delaney, G. Shaw, A. Delaney, 2010, American journal of medical genetics. Part A.

Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data

Marco A. Marra, Hong Qian, Giulia C. Kennedy, 2007, BMC Bioinformatics.

Sequence biases in large scale gene expression profiling data

Obi L. Griffith, Marco A. Marra, Asim S. Siddiqui, 2006, Nucleic acids research.

Impact of whole genome amplification on analysis of copy number variants

R. Gascoyne, P. Farinha, M. Marra, 2008, Nucleic acids research.

A Modified Polymerase Chain Reaction‐Long Serial Analysis of Gene Expression Protocol Identifies Novel Transcripts in Human CD34+ Bone Marrow Cells

M. Marra, D. Kent, A. Delaney, 2007, Stem cells.

Comparison of genome-wide array genomic hybridization platforms for the detection of copy number variants in idiopathic mental retardation

B. Coe, A. Montpetit, W. Lam, 2011, BMC Medical Genomics.

A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.

Sarah Barber, Steven J. M. Jones, Richard Varhol, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Tag‐Seq: Next‐Generation Tag Sequencing for Gene Expression Profiling

Allen D. Delaney, M. Marra, M. Hirst, 2012 .

Award Number: W81XWH-07-1-0503 TITLE: Identification of Novel Genes and Candidate Targets in CML Stem Cells PRINCIPAL INVESTIGATOR: Dr. Connie Eaves CONTRACTING ORGANIZATION: British Columbia Cancer Agency

M. Marra, A. Delaney, A. Schnerch, 2009 .

Novel expressed sequences identified in a model of androgen independent prostate cancer

Steven J. M. Jones, J. Schein, M. Marra, 2007, BMC Genomics.

Title: A patient with vertebral, cognitive and behavioural abnormalities and a de novo deletion of NRXN1 Authors:

M. Marra, A. Delaney, Á. Baross, 2007 .

Differentially Expressed and Novel Transcripts in Highly Purified Chronic Phase CML Stem Cells

M. Marra, A. Delaney, A. Schnerch, 2008 .

Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach

Steven J. M. Jones, E. Mardis, M. Marra, 2006 .

Molecular cloning of the cDNA and chromosomal localization of the gene for a putative seven-transmembrane segment (7-TMS) receptor isolated from human spleen.

Allen D. Delaney, A. Delaney, K. Schappert, 1993, Genomics.

ARID1A mutations in endometriosis-associated ovarian carcinomas.

Richard A. Moore, Allen D. Delaney, S. Fereday, 2010, The New England journal of medicine.