B. Suess

发表

Molecular mechanisms of gene regulation studied by site-directed spin labeling.

H. Steinhoff, B. Suess, 2003, Methods.

Single cell measurements in microfluidic chips to determine the dynamics of transcription during induction Einzelzellmessungen in mikrofluidischen Chips zur Bestimmung der Transkriptionsdynamiken während Stimulation Single cell measurements in microfluidic chips to determine the dynamics of transcr

B. Suess, J. Diemer, B. Süß, 2019 .

Water-soluble Py-BIPS spiropyrans as photoswitches for biological applications.

H. Schwalbe, B. Suess, B. Fürtig, 2015, Organic letters.

Engineered riboswitches: Overview, problems and trends

B. Suess, J. E. Weigand, J. Weigand, 2008, RNA biology.

A test system for the printing of functional nucleic acids onto different carriers and verification of its functionality by DNA dyes

B. Suess, T. Meckel, Florian Groher, 2019 .

Conformational dynamics of the tetracycline-binding aptamer

B. Suess, J. Wachtveitl, J. E. Weigand, 2011, Nucleic acids research.

A theophylline responsive riboswitch based on helix slipping controls gene expression in vivo.

B. Suess, W. Hillen, C. Berens, 2004, Nucleic acids research.

RNA aptamers as genetic control devices: The potential of riboswitches as synthetic elements for regulating gene expression

Florian Groher, Beatrix Suess, B. Suess, 2015, Biotechnology journal.

Riboswitch engineering - making the all-important second and third steps.

Beatrix Suess, B. Suess, C. Berens, 2015, Current opinion in biotechnology.

Synthetic riboswitches - A tool comes of age.

Florian Groher, Beatrix Suess, B. Suess, 2014, Biochimica et biophysica acta.

Tetracycline aptamer-controlled regulation of pre-mRNA splicing in yeast

Beatrix Suess, B. Suess, J. E. Weigand, 2007, Nucleic acids research.

Screening for engineered neomycin riboswitches that control translation initiation.

Beatrix Suess, B. Suess, R. Schroeder, 2007, RNA.

An RNA aptamer that induces transcription.

Günter Mayer, Beatrix Suess, B. Suess, 2009, Chemistry & biology.

A fast and efficient translational control system for conditional expression of yeast genes

Karl-Dieter Entian, Beatrix Suess, K. Entian, 2009, Nucleic acids research.

Dynamic nuclear polarization on a hybridized hammerhead ribozyme: An explorative study of RNA folding and direct DNP with a paramagnetic metal ion cofactor.

B. Suess, Diane Daube, Marc Vogel, 2019, Solid state nuclear magnetic resonance.

Splicing and Alternative Splicing Impact on Gene Design

B. Suess, J. E. Weigand, K. Kemmerer, 2018 .

Binding of tetracycline to its aptamer determined by 2D-correlated Mn2+ hyperfine spectroscopy.

Alice M. Bowen, B. Suess, T. Prisner, 2019, Journal of magnetic resonance.

A light-responsive RNA aptamer for an azobenzene derivative

B. Suess, A. Heckel, Thomas Halbritter, 2018, Nucleic acids research.

Small-Molecule-Binding Riboswitches

B. Suess, T. S. Lotz, 2018, Microbiology spectrum.

Tuning the Performance of Synthetic Riboswitches using Machine Learning.

Kay Hamacher, Sven Jager, Florian Groher, 2018, ACS synthetic biology.

Inducible nuclear import by TetR aptamer-controlled 3′ splice site selection

B. Suess, Marc Vogel, Adam Mol, 2020, RNA.

A small, portable RNA device for the control of exon skipping in mammalian cells

B. Suess, M. Grez, J. E. Weigand, 2018, Nucleic acids research.

Pharmacological Inhibition of Platelet-Tumor Cell Cross-Talk Prevents Platelet-Induced Overexpression of Cyclooxygenase-2 in HT29 Human Colon Carcinoma Cells

B. Suess, D. Steinhilber, E. Marcantoni, 2013, Molecular Pharmacology.

Design and implementation of a synthetic pre-miR switch for controlling miRNA biogenesis in mammals

B. Suess, Florian Groher, J. E. Weigand, 2017, Nucleic acids research.

Structural changes in aptamers are essential for synthetic riboswitch engineering.

B. Suess, Janis Hötzel, 2022, Journal of molecular biology.

Robust gene expression control in human cells with a novel universal TetR aptamer splicing module

B. Suess, Florian Groher, Adam Mol, 2019, Nucleic acids research.

miR-19a-3p and miR-125b-5p 5-Lipoxygenase Is a Direct Target of

B. Suess, U. Koehl, Sabine, 2022 .

PELDOR spectroscopy reveals preorganization of the neomycin-responsive riboswitch tertiary structure.

B. Suess, Deniz Sezer, J. E. Weigand, 2010, Journal of the American Chemical Society.

Dicer up-regulation by inhibition of specific proteolysis in differentiating monocytic cells

B. Suess, D. Steinhilber, B. Samuelsson, 2020, Proceedings of the National Academy of Sciences.

sRNA scr5239 Involved in Feedback Loop Regulation of Streptomyces coelicolor Central Metabolism

B. Suess, P. Jakobsson, M. Vockenhuber, 2020, Frontiers in Microbiology.

Complex Formation of the Tetracycline-Binding Aptamer Investigated by Specific Cross-Relaxation under DNP.

B. Suess, I. Burghardt, R. Binder, 2019, Angewandte Chemie.

Complex Formation of the Tetracycline‐Binding Aptamer Investigated by Specific Cross‐Relaxation under DNP

B. Suess, I. Burghardt, R. Binder, 2019, Angewandte Chemie.

Small non-coding RNAs in streptomycetes

B. Suess, M. Vockenhuber, Nona Heueis, 2014, RNA biology.

Dynamic nuclear polarization of nucleic acid with endogenously bound manganese

B. Suess, Monu Kaushik, Marc Vogel, 2015, Journal of Biomolecular NMR.

In vitro selection of antibiotic-binding aptamers.

B. Suess, Florian Groher, 2016, Methods.

Dynamic nuclear polarization of nucleic acid with endogenously bound manganese

B. Suess, Monu Kaushik, Marc Vogel, 2015, Journal of biomolecular NMR.

Ligand binding to 2΄-deoxyguanosine sensing riboswitch in metabolic context

H. Schwalbe, B. Suess, V. Rogov, 2017, Nucleic acids research.

What defines a synthetic riboswitch? – Conformational dynamics of ciprofloxacin aptamers with similar binding affinities but varying regulatory potentials

B. Suess, Florian Groher, J. Wachtveitl, 2021, Nucleic acids research.

Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation

H. Schwalbe, B. Suess, B. Fürtig, 2017, eLife.

Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators

Beatrix Suess, B. Suess, Alexander Wittmann, 2012, FEBS letters.

SRSF3 and SRSF7 modulate 3′UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels

B. Suess, I. Poser, I. R. D. L. Mozos, 2021, Genome biology.

MicroRNAs-novel therapeutic targets of eicosanoid signalling.

B. Suess, D. Steinhilber, Meike J. Ochs, 2014, Basic & clinical pharmacology & toxicology.

MicroRNA Involved in Inflammation: Control of Eicosanoid Pathway

B. Suess, D. Steinhilber, Meike J. Ochs, 2011, Front. Pharmacol..

Development of β-Lactamase as a Tool for Monitoring Conditional Gene Expression by a Tetracycline-Riboswitch in Methanosarcina acetivorans

B. Suess, M. Rother, J. E. Weigand, 2014, Archaea.

Regulation of miR‐17‐92a cluster processing by the microRNA binding protein SND1

B. Suess, Jasmin Wagner, S. Dimmeler, 2013, FEBS letters.

Regulation of miR-1792 a cluster processing by the microRNA binding protein SND 1

B. Suess, Jasmin Wagner, S. Dimmeler, 2013 .

A Universal Aptamer Chimera for the Delivery of Functional microRNA-126.

B. Suess, S. Dimmeler, J. E. Weigand, 2015, Nucleic acid therapeutics.

Engineered riboswitches as novel tools in molecular biology.

Beatrix Suess, B. Suess, Gesine Bauer, 2006, Journal of biotechnology.

Synthetic riboregulators - an alternative means to control gene expression

Beatrix Suess, B. Suess, C. Berens, 2005 .

Post-Transcriptional Regulation of 5-Lipoxygenase mRNA Expression via Alternative Splicing and Nonsense-Mediated mRNA Decay

B. Suess, D. Steinhilber, M. Grez, 2012, PloS one.

Regulation of Eicosanoid Pathways by MicroRNAs

B. Suess, D. Steinhilber, Anne C. Emmerich, 2019, Front. Pharmacol..

Modulation of microRNA processing by 5‐lipoxygenase

B. Suess, O. Werz, D. Steinhilber, 2020, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation

B. Suess, Amit Arora, 2011, RNA biology.

Monitoring the expression level of coding and non-coding RNAs using a TetR inducing aptamer tag.

B. Suess, K. Wiesemann, J. E. Weigand, 2013, Bioorganic & medicinal chemistry.

ROC'n'Ribo: Characterizing a Riboswitching Expression System by Modeling Single-Cell Data.

Heinz Koeppl, Jascha Diemer, Christopher Schneider, 2017, ACS synthetic biology.

Selection of tetracycline inducible self-cleaving ribozymes as synthetic devices for gene regulation in yeast.

Beatrix Suess, B. Suess, Alexander Wittmann, 2011, Molecular bioSystems.

Aptamers as artificial gene regulation elements.

B. Suess, J. E. Weigand, J. Weigand, 2009, Methods in molecular biology.

Tetracycline‐aptamer‐mediated translational regulation in yeast

Barbara Fink, Beatrix Suess, B. Suess, 2003, Molecular microbiology.

Conditional gene expression by controlling translation with tetracycline-binding aptamers.

Barbara Fink, Beatrix Suess, B. Suess, 2003, Nucleic acids research.

Cell-free prototyping of AND-logic gates based on heterogeneous RNA activators

Heinz Koeppl, Maleen Hanst, François-Xavier Lehr, 2019, bioRxiv.

Cell-free prototyping of AND-logic gates based on heterogeneous RNA activators

Heinz Koeppl, Maleen Hanst, Beatrix Suess, 2019, bioRxiv.

Deep sequencing-based identification of small non-coding RNAs in Streptomyces coelicolor

D. Mathews, B. Suess, Z. Xu, 2011, RNA biology.

5-Lipoxygenase Is a Direct Target of miR-19a-3p and miR-125b-5p

B. Suess, D. Steinhilber, U. Koehl, 2015, The Journal of Immunology.

Mechanistic insights into an engineered riboswitch: a switching element which confers riboswitch activity

Beatrix Suess, Jens Wöhnert, B. Suess, 2010, Nucleic acids research.

What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.

Beatrix Suess, Jens Wöhnert, B. Suess, 2016, Angewandte Chemie.

RNA-based Capture-SELEX for the selection of small molecule-binding aptamers.

B. Suess, Florian Groher, Adrien Boussebayle, 2019, Methods.

Streptomyces coelicolor sRNA scr5239 inhibits agarase expression by direct base pairing to the dagA coding region.

B. Suess, M. Vockenhuber, 2012, Microbiology.

Mass spectrometry-based proteomics identifies UPF1 as a critical gene expression regulator in MonoMac 6 cells.

B. Suess, D. Steinhilber, P. Jakobsson, 2013, Journal of proteome research.

UPF1 regulates myeloid cell functions and S100A9 expression by the hnRNP E2/miRNA-328 balance

B. Suess, D. Steinhilber, P. Jakobsson, 2016, Scientific Reports.

Small-Molecule-Binding Riboswitches

B. Suess, T. S. Lotz, 2018, Regulating with RNA in Bacteria and Archaea.

Riboswitching with ciprofloxacin—development and characterization of a novel RNA regulator

Kay Hamacher, Sven Jager, Katharina Geißler, 2018, Nucleic acids research.

A Synthetic Riboswitch to Regulate Haloarchaeal Gene Expression

B. Suess, F. Pfeifer, Kerstin Weitzel, 2021, Frontiers in Microbiology.

Identification of RNA aptamers with riboswitching properties.

Beatrix Suess, B. Suess, C. Schneider, 2016, Methods.

A designed RNA shuts down transcription.

B. Suess, J. E. Weigand, J. Weigand, 2007, Chemistry & biology.

Engineered riboswitches control gene expression by small molecules.

B. Suess, 2005, Biochemical Society transactions.

Molecular analysis of a synthetic tetracycline-binding riboswitch.

Barbara Fink, Beatrix Suess, B. Suess, 2005, RNA.

A novel mechanism for translation initiation operates in haloarchaea

B. Suess, M. Brenneis, O. Hering, 2009, Molecular microbiology.

Conditional control of gene expression by synthetic riboswitches in Streptomyces coelicolor.

B. Suess, M. Vockenhuber, Martin M Rudolph, 2015, Methods in enzymology.

Synthetic riboswitches for the conditional control of gene expression in Streptomyces coelicolor.

Beatrix Suess, B. Suess, M. Vockenhuber, 2013, Microbiology.

Label-Free Determination of the Dissociation Constant of Small Molecule-Aptamer Interaction by Isothermal Titration Calorimetry.

B. Suess, Marc Vogel, 2016, Methods in molecular biology.

Influence of Mg2+ on the conformational flexibility of a tetracycline aptamer

B. Suess, S. Sigurdsson, J. E. Weigand, 2018, RNA.

Tetracycline determines the conformation of its aptamer at physiological magnesium concentrations.

Marc Vogel, Beatrix Suess, B. Suess, 2014, Biophysical journal.

Thermodynamic characterization of an engineered tetracycline-binding riboswitch

Michael Müller, Oliver Weichenrieder, Beatrix Suess, 2006, Nucleic acids research.

A dual control mechanism synchronizes riboflavin and sulphur metabolism in Bacillus subtilis

U. Sauer, B. Suess, D. Pedrolli, 2015, Proceedings of the National Academy of Sciences.

miR‐574‐5p as RNA decoy for CUGBP1 stimulates human lung tumor growth by mPGES‐1 induction

B. Suess, W. Seeger, D. Steinhilber, 2019, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Conditional control of mammalian gene expression by tetracycline-dependent hammerhead ribozymes.

B. Suess, M. Grez, Kim Beilstein, 2015, ACS synthetic biology.

Aptamer-regulated expression of essential genes in yeast.

K. Entian, P. Kötter, B. Suess, 2012, Methods in molecular biology.

Identification of metE as a Second Target of the sRNA scr5239 in Streptomyces coelicolor

B. Suess, M. Vockenhuber, Nona Heueis, 2015, PloS one.

Sequence Elements Distal to the Ligand Binding Pocket Modulate the Efficiency of a Synthetic Riboswitch

B. Suess, J. Wöhnert, Florian Groher, 2014, Chembiochem : a European journal of chemical biology.

Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch.

B. Suess, J. Wöhnert, O. Ohlenschläger, 2010, Angewandte Chemie.

NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin

Beatrix Suess, Jens Wöhnert, B. Suess, 2010, Biomolecular NMR assignments.

Aptamers and riboswitches: perspectives in biotechnology

Beatrix Suess, B. Suess, J. E. Weigand, 2009, Applied Microbiology and Biotechnology.

Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.

Heinz-Jürgen Steinhoff, Sabine Müller, Beatrix Suess, 2011, RNA.

The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA–TetR regulator complex

B. Suess, Y. Muller, Florian Groher, 2020, Nucleic acids research.

Next-level riboswitch development—implementation of Capture-SELEX facilitates identification of a new synthetic riboswitch

Kay Hamacher, Florian Groher, Beatrix Suess, 2019, Nucleic acids research.

Biochemical Analysis of the Complex between the Tetrameric Export Adapter Protein Rec of HERV-K/HML-2 and the Responsive RNA Element RcRE pck30

B. Suess, R. Löwer, N. V. Fuchs, 2012, Journal of Virology.

Engineered riboswitches control gene expression by small molecules

B. Suess, Michael Müller, S. Hanson, 2005 .

Characterization and Inkjet Printing of an RNA Aptamer for Paper-Based Biosensing of Ciprofloxacin

Edgar Dörsam, Dieter Spiehl, Florian Groher, 2019, Biosensors.

Building a stable RNA U-turn with a protonated cytidine

B. Suess, J. Wöhnert, Florian Groher, 2014, RNA.

Investigating the Prevalence of RNA-Binding Metabolic Enzymes in E. coli

B. Suess, G. Meister, Franziska Funke, 2023, International journal of molecular sciences.

Corrigendum to "RNA-based Capture-SELEX for the selection of small molecule-binding aptamers" [Methods 161 (2019) 10-15].

B. Suess, Florian Groher, Adrien Boussebayle, 2019, Methods.

Tapping the potential of synthetic riboswitches: reviewing the versatility of the tetracycline aptamer

B. Suess, Daniel Kelvin, 2023, RNA biology.

SICOR: Subgraph Isomorphism Comparison of RNA Secondary Structures

Michael Schmidt, Kay Hamacher, Sven Jager, 2020, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

5-lipoxygenase mRNA and protein isoforms.

B. Suess, D. Steinhilber, Meike J. Ochs, 2014, Basic & clinical pharmacology & toxicology.

TGFβ/SMAD signalling modulates MLL and MLL-AF4 mediated 5-lipoxygenase promoter activation.

B. Suess, D. Steinhilber, R. Marschalek, 2017, Prostaglandins & other lipid mediators.

Riboswitch engineering - making the all-important second and third steps.

B. Suess, C. Berens, 2015, Current opinion in biotechnology.

Tetracycline aptamer-controlled regulation of pre-mRNA splicing in yeast

B. Suess, J. Weigand, 2007, Nucleic acids research.

Magnesium Ion-Driven Folding and Conformational Switching Kinetics of Tetracycline Binding Aptamer: Implications for in vivo Riboswitch Engineering.

B. Suess, J. Wachtveitl, Bettina Appel, 2023, Journal of molecular biology.

Biochemical Analysis of the Complex between the Tetrameric Export Adapter Protein Rec of HERV-K/HML-2 and the Responsive RNA Element RcRE pck30

B. Suess, R. Löwer, N. V. Fuchs, 2012, Journal of Virology.

Sequence Elements Distal to the Ligand Binding Pocket Modulate the Efficiency of a Synthetic Riboswitch

B. Suess, J. Wöhnert, Florian Groher, 2014, Chembiochem : a European journal of chemical biology.

ROC'n'Ribo: Characterizing a Riboswitching Expression System by Modeling Single-Cell Data.

B. Suess, H. Koeppl, C. Schneider, 2017, ACS synthetic biology.

Mechanistic Basis for RNA Aptamer‐Based Induction of TetR

B. Suess, Amit Arora, Markus Steber, 2011, Chembiochem : a European journal of chemical biology.

Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation

H. Schwalbe, B. Suess, B. Fürtig, 2017, eLife.

RNA-based networks: using RNA aptamers and ribozymes as synthetic genetic devices.

B. Suess, Alexander Wittmann, J. Weigand, 2012, Methods in molecular biology.