T. Kulinski

发表

The Apical Loop of the HIV-1 TAR RNA Hairpin Is Stabilized by a Cross-loop Base Pair*

T. Kulinski, M. Olejniczak, H. Huthoff, 2003, Journal of Biological Chemistry.

Effects of base substitutions in an RNA hairpin from molecular dynamics and free energy simulations.

Lennart Nilsson, Tadeusz Kulinski, Joanna Sarzynska, 2003, Biophysical journal.

Conformational dynamics of a 5S rRNA hairpin domain containing loop D and a single nucleotide bulge.

T. Kulinski, L. Nilsson, J. Sarzynska, 2000, Biophysical journal.

Studies of viomycin, an anti-tuberculosis antibiotic: copper(ii) coordination, DNA degradation and the impact on delta ribozyme cleavage activity.

T. Kulinski, J. Wrzesinski, J. Ciesiołka, 2016, Dalton transactions.

A molecular dynamics computer simulation study of nucleotide analogues. Comparison of the hydration pattern of dithymidine phosphate with those of the dithymidine methylphosphonate diastereomers.

T. Kulinski, A. Laaksonen, J. Stawinski, 1998, Journal of biomolecular structure & dynamics.

Fluorescence lifetime measurements of pseudoazulenes using picosecond-resolved single photon counting

T. Kulinski, A. Visser, A. Hoek, 1988 .

Antivirally Active Ribavirin Analogues – 4,5-disubstituted 1,2,3-triazole Nucleosides: Biological Evaluation against Certain Respiratory Viruses and Computational Modelling

T. Kulinski, D. Smee, B. Hurst, 2014, Antiviral chemistry & chemotherapy.

Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields.

J. Šponer, M. Orozco, T. Kulinski, 2009, Journal of chemical theory and computation.

Conformations of Flanking Bases in HIV-1 RNA DIS Kissing Complexes Studied by Molecular Dynamics

Jaroslav Koča, Petr Kulhánek, Tadeusz Kulinski, 2007, Biophysical journal.

Spectroscopic investigations of the single tryptophan residue and of riboflavin and 7-oxolumazine bound to lumazine apoprotein from Photobacterium leiognathi.

T. Kulinski, D. O'Kane, A. Visser, 1987, Biochemistry.

Mg2+ dependence of the structure and thermodynamics of wheat germ and lupin seeds 5S rRNA.

T. Kulinski, M. Bratek-Wiewiórowska, W. Zielenkiewicz, 1997, Journal of biomolecular structure & dynamics.

Molecular dynamics simulation of the preferred conformations of 2-thiouridine in aqueous solution

Lennart Nilsson, Tadeusz Kulinski, Joanna Sarzynska, 2007 .

Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA

Jacek Blazewicz, Maciej Milostan, Marek Figlerowicz, 2017, Comput. Biol. Chem..

Flexibility of Dicer Studied by Implicit Solvent Molecular Dynamics Simulations

Jacek Blazewicz, Maciej Milostan, Tadeusz Kulinski, 2010 .

Time‐resolved fluorescence studies of flavodoxin Demonstration of picosecond fluorescence lifetimes of FMN in Desulfovibrio flavodoxins

T. Kulinski, A. Visser, A. van Hoek, 1987 .

Structure and Dynamics of Adenosine Loops in RNA Bulge Duplexes. RNA Hydration at the Bulge Site

T. Kulinski, R. Adamiak, Łukasz Bielecki, 1999 .

Dynamics of the peptide hormone motilin studied by time resolved fluorescence spectroscopy

T. Kulinski, R. Rigler, A. Gräslund, 2004, European Biophysics Journal.

Conformational transitions of flanking purines in HIV‐1 RNA dimerization initiation site kissing complexes studied by CHARMM explicit solvent molecular dynamics

K. Réblová, J. Šponer, T. Kulinski, 2008, Biopolymers.

The interaction of pyrene labeled diacylglycerol with protein kinase C in mixed micelles.

T. Kulinski, P. Bastiaens, A. Visser, 1993, Biophysical chemistry.

Mapping the interactions of selected antibiotics and their Cu2+ complexes with the antigenomic delta ribozyme

T. Kulinski, J. Wrzesinski, J. Ciesiołka, 2013, The FEBS journal.

Watson–Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation

T. Kulinski, W. Rypniewski, A. Kiliszek, 2016, RNA.

Thermodynamic stability of RNA structures formed by CNG trinucleotide repeats. Implication for prediction of RNA structure.

Tadeusz Kulinski, R. Kierzek, T. Kulinski, 2005, Biochemistry.

Hydration of C-H groups in natural dithymidine nucleotide and its methylphosphonate analogues.

T. Kulinski, J. Stawinski, K. Kulinska, 1998, Acta biochimica Polonica.

Site specific point mutation changes specificity: A molecular modeling study by free energy simulations and enzyme kinetics of the thermodynamics in ribonuclease T1 substrate interactions

T. Kulinski, A. Elofsson, L. Nilsson, 1993, Proteins.

Conformational analysis of galanin using end to end distance distribution observed by Förster resonance energy transfer

T. Kulinski, S. Provencher, T. Bártfai, 1997, European Biophysics Journal.

Exploring Conformational Space and Dynamics of RNA Hairpins by MD Simulations : Structure-Function Correlation of HIV-1 Genome Regulatory Elements

T. Kulinski, S. Mohanty, U. Hansmann, 2007 .

Spatial Distribution Functions As a Tool in the Analysis of Ribonucleic Acids Hydration - Molecular Dynamics Studies

K Kulińska, T Kuliński, A Lyubartsev, 2000, Comput. Chem..

Parametrization of 2 - aminopurine and purine in charmm all - atom empirical force field

T. Kulinski, J. Sarzynska, K. Kulinska, 2003 .

Dynamics and Stability of GCAA Tetraloops with 2-Aminopurine and Purine Substitutions

T. Kulinski, J. Sarzynska, 2005, Journal of biomolecular structure & dynamics.

Parametrization of 2-thiouracil and 4-thiouracil in CHARMM all-atom empirical force field

T. Kulinski, J. Sarzynska, 2005 .