S. Bottani

发表

Topological and causal structure of the yeast transcriptional regulatory network

P. Bourgine, Nabil Guelzim, S. Bottani, 2002, Nature Genetics.

An evolutionary and functional assessment of regulatory network motifs

M. Vergassola, S. Bottani, Aurélien Mazurie, 2005, Genome Biology.

Gene networks inference using dynamic Bayesian networks

Aurélien Mazurie, Liva Ralaivola, Florence d'Alché-Buc, 2003, ECCB.

Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects.

S. Bottani, R. Veitia, J. Birchler, 2008, Trends in genetics : TIG.

Long-term model predictive control of gene expression at the population and single-cell levels

F. Fages, T. Delaveau, S. Bottani, 2012, Proceedings of the National Academy of Sciences.

Analysis of a minimal model for p53 oscillations.

Samuel Bottani, S. Bottani, B. Grammaticos, 2007, Journal of theoretical biology.

Unexpected coherence and conservation

S. Bottani, L. Stone, B. Cazelles, 2001, Proceedings of the Royal Society of London. Series B: Biological Sciences.

Combining Microfluidics, Optogenetics and Calcium Imaging to Study Neuronal Communication In Vitro

Pascal Monceau, Renaud Renault, Samuel Bottani, 2015, PloS one.

Gene dosage effects: nonlinearities, genetic interactions, and dosage compensation.

Samuel Bottani, S. Bottani, R. Veitia, 2013, Trends in genetics : TIG.

Effective non-universality of the quorum percolation model on directed graphs with Gaussian in-degree

S. Bottani, S. Métens, R. Renault, 2014 .

Effects of inhibitory neurons on the quorum percolation model and dynamical extension with the Brette–Gerstner model

S. Bottani, S. Métens, P. Monceau, 2018, Physica A: Statistical Mechanics and its Applications.

A dynamic model of gene regulatory networks based on inertia principle

Liva Ralaivola, Pierre-Jean Lahaye, Florence d’Alché–Buc, 2005 .

Phase transition approach to bursting in neuronal cultures: quorum percolation models

S. Bottani, S. Métens, R. Renault, 2016 .

Stochastic and deterministic simulations of a delayed genetic oscillation model: Investigating the validity of reductions

S. Bottani, B. Grammaticos, 2012 .

Post-capillary laser-induced fluorescence detection without sheath-flow

S. Bottani, H. Rebscher, R. Siebert, 1999 .

Rich dynamics and functional organization on topographically designed neuronal networks in vitro

S. Bottani, J. Soriano, P. Monceau, 2022, bioRxiv.

Chapter 13 In Silico Control of Biomolecular Processes

F. Fages, T. Delaveau, S. Bottani, 2014 .

Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding

Megan N. McClean, F. Waharte, S. Bottani, 2013, Proceedings of the National Academy of Sciences.

Hill function‐based models of transcriptional switches: impact of specific, nonspecific, functional and nonfunctional binding

S. Bottani, R. Veitia, 2017, Biological reviews of the Cambridge Philosophical Society.

X chromosome inactivation and active X upregulation in therian mammals: facts, questions, and hypotheses.

S. Bottani, R. Veitia, J. Birchler, 2015, Journal of molecular cell biology.

Mobility and activation energy of single-stranded DNA in denaturing cross-linked polyacrylamide slab gels.

S. Bottani, M. Duval, Z. Djouadi, 2000, Journal of chromatography. A.

Aging: Somatic Mutations, Epigenetic Drift and Gene Dosage Imbalance.

S. Bottani, R. Veitia, J. Birchler, 2017, Trends in cell biology.

A simple model of genetic oscillations through regulated degradation

S. Bottani, B. Grammaticos, 2008 .

Whole Genome Duplications and a ‘Function’ for Junk DNA? Facts and Hypotheses

S. Bottani, R. Veitia, 2009, PloS one.

Towards Real-Time Control of Gene Expression: Controlling the Hog Signaling Cascade

François Fages, Pascal Hersen, Grégory Batt, 2011, Pacific Symposium on Biocomputing.

Tunable bet hedging in yeast responses to osmotic stress

S. Bottani, W. L. Pang, S. Rutherford, 2016, bioRxiv.

Genetic networks: between theory and experimentation

Samuel Bottani, Aurélien J. Mazurie, S. Bottani, 2007 .

In silico control of biomolecular processes.

François Fages, Samuel Bottani, Gilles Charvin, 2015, Methods in molecular biology.

Gene Expression Dominance in Allopolyploids: Hypotheses and Models.

Nicolae Radu Zabet, S. Bottani, R. Veitia, 2018, Trends in plant science.

Understanding the Generation of Network Bursts by Adaptive Oscillatory Neurons

Pascal Monceau, Tanguy Fardet, Samuel Bottani, 2018, Front. Neurosci..

Natural variation in hyperosmotic stress responses of budding yeast

S. Bottani, S. Rutherford, Yoshikazu Hirate, 2016 .

Long-term model predictive control of gene expression at the population and single-cell levels

F. Fages, T. Delaveau, S. Bottani, 2012, Proceedings of the National Academy of Sciences.