B. Ning

Huixiao Hong, Leming Shi, Zhenqiang Su, 2014, Journal of environmental science and health. Part C, Environmental carcinogenesis & ecotoxicology reviews.

Identification of functional genetic variants in cyclooxygenase-2 and their association with risk of esophageal cancer.

B. Ning, W. Tan, D. Lin, 2005, Gastroenterology.

Differential promoter activities of functional haplotypes in the 5′‐flanking region of human Sulfotransferase 1A1

B. Ning, B. Green, Susan A Kadlubar, 2012, Journal of biochemical and molecular toxicology.

Whole genome and normalized mRNA sequencing reveal genetic status of TK6, WTK1, and NH32 human B-lymphoblastoid cell lines.

B. Ning, S. Morris, D. Petibone, 2016, Mutation research. Genetic toxicology and environmental mutagenesis.

The Development of a Database for Herbal and Dietary Supplement Induced Liver Toxicity

Weida Tong, Dianke Yu, Jieqiang Zhu, 2018, International journal of molecular sciences.

Physiologically Based Pharmacokinetic (PBPK) Modeling of RNAi Therapeutics: Opportunities and Challenges.

B. Ning, Miao Li, A. Lumen, 2021, Biochemical pharmacology.

Challenges, Solutions, and Quality Metrics of Personal Genome Assembly in Advancing Precision Medicine

Huixiao Hong, Leihong Wu, Baitang Ning, 2016, Pharmaceutics.

Regulation of cytochrome P450 expression by microRNAs and long noncoding RNAs: Epigenetic mechanisms in environmental toxicology and carcinogenesis

W. Xiao, W. Tong, Lei Guo, 2019, Journal of environmental science and health. Part C, Environmental carcinogenesis & ecotoxicology reviews.

microRNAs as pharmacogenomic biomarkers for drug efficacy and drug safety assessment.

Huixiao Hong, Si Chen, Lei Guo, 2015, Biomarkers in medicine.

The SEQC2 epigenomics quality control (EpiQC) study

Raymond G. Cavalcante, Paweł P. Łabaj, Matthew A. Campbell, 2021, Genome biology.

Critical role of bioinformatics in translating huge amounts of next-generation sequencing data into personalized medicine

Tao Han, Jie Shen, Roger Perkins, 2013, Science China Life Sciences.

Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

G. Schroth, W. Xiao, J. Zook, 2022, Genome biology.

Single nucleotide polymorphism rs11669203 in TGFBR3L is associated with the risk of neuroblastoma in a Chinese population

B. Ning, Dianke Yu, Yongli Guo, 2016, Tumor Biology.

X-CNV: genome-wide prediction of the pathogenicity of copy number variations

Tieliu Shi, W. Tong, B. Ning, 2021, Genome medicine.

Systematic and Simultaneous Gene Profiling of 84 Drug-Metabolizing Genes in Primary Human Hepatocytes

Lei Guo, B. Ning, S. Dial, 2008, Journal of biomolecular screening.

Application of genome analysis strategies in the clinical testing for pediatric diseases

Weida Tong, Huixiao Hong, Baitang Ning, 2018, Pediatric investigation.

Functional genetic variants in the 3'-untranslated region of sulfotransferase isoform 1A1 (SULT1A1) and their effect on enzymatic activity.

B. Ning, Susan A Kadlubar, V. Edavana, 2010, Toxicological sciences : an official journal of the Society of Toxicology.

Advances and Challenges in Studying Noncoding RNA Regulation of Drug Metabolism and Development of RNA Therapeutics.

B. Ning, Dianke Yu, A. Yu, 2019, Biochemical pharmacology.

Transcriptomic profiling for safety and toxicity evaluation of nutraceuticals

Lei Guo, N. Mei, B. Ning, 2021 .

MicroRNA hsa-miR-25-3p suppresses the expression and drug induction of CYP2B6 in human hepatocytes.

B. Ning, Dianke Yu, Yongli Guo, 2016, Biochemical pharmacology.

MicroRNA-Dependent Gene Regulation of the Human Cytochrome P450

W. Xiao, W. Tong, Lei Guo, 2019, Pharmacoepigenetics.

Development of HepG2-derived cells expressing cytochrome P450s for assessing metabolism-associated drug-induced liver toxicity.

Lei Guo, B. Ning, J. Xuan, 2016, Chemico-biological interactions.

Using a Lentivirus-Based Inducible RNAi Vector to Silence a Gene.

Lei Guo, N. Mei, B. Ning, 2020, Methods in molecular biology.

Assessing sources of inconsistencies in genotypes and their effects on genome-wide association studies with HapMap samples

F. Goodsaid, H. Fang, W. Ge, 2010, The Pharmacogenomics Journal.

Patterns and trends of pancreatic cancer mortality rates in Arkansas, 1969–2002: a comparison with the US population

B. Ning, H. Kesteloot, Jianjun Zhang, 2008, European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation.

Genetic associations with micronutrient levels identified in immune and gastrointestinal networks

Melissa J. Morine, B. Ning, C. Priami, 2014, Genes & Nutrition.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Hugo Y. K. Lam, Winnie S. Liang, Daoud M. Meerzaman, 2021, Nature Biotechnology.

An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era

Wenwei Zhang, Yanyan Zhang, Leming Shi, 2014, Genome Biology.

The international MAQC Society launches to enhance reproducibility of high-throughput technologies

Cesare Furlanello, Weida Tong, Leming Shi, 2017, Nature Biotechnology.

Leming Shi, Lei Guo, B. Ning, 2011, Drug Metabolism And Disposition.

Linking Pharmacogenomic Information on Drug Safety and Efficacy with Ethnic Minority Populations

B. Ning, Joshua Xu, Zhichao Liu, 2020, Pharmaceutics.

The SEQC2 Epigenomics Quality Control (EpiQC) Study: Comprehensive Characterization of Epigenetic Methods, Reproducibility, and Quantification

Raymond G. Cavalcante, Paweł P. Łabaj, Matthew A. Campbell, 2020, bioRxiv.

Common genetic polymorphisms in the 5′-flanking Region of the SULT1A1 gene: haplotypes and their association with platelet enzymatic activity

B. Ning, D. Lin, X. Miao, 2005, Pharmacogenetics and genomics.

Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions

Paul M. Rindler, David P. Kreil, Paweł P. Łabaj, 2021, Genome biology.

Towards population-specific pharmacogenomics in the era of next-generation sequencing.

Tieliu Shi, W. Tong, B. Ning, 2021, Drug discovery today.

Original Article Association between GSTM1 copy number, promoter variants and susceptibility to urinary bladder cancer

B. Ning, Xifeng Wu, Jie Lin, 2012 .

Association between GSTM1 copy number, promoter variants and susceptibility to urinary bladder cancer.

Baitang Ning, Jie Lin, Susan Kadlubar, 2012, International journal of molecular epidemiology and genetics.

Sex Differences in the Expression of Drug-Metabolizing and Transporter Genes in Human Liver

Leming Shi, H. Hong, B. Ning, 2012, Journal of drug metabolism & toxicology.

DNA damage‐induced apoptosis and mitogen‐activated protein kinase pathway contribute to the toxicity of dronedarone in hepatic cells

Lei Guo, B. Ning, Dianke Yu, 2018, Environmental and molecular mutagenesis.

Synergic effect of polymorphisms in ERCC6 5' flanking region and complement factor H on age-related macular degeneration predisposition.

Baitang Ning, Min Zhou, Xiaodong Jiao, 2006, Proceedings of the National Academy of Sciences of the United States of America.

FDA-led consortium studies advance quality control of targeted next generation sequencing assays for precision oncology

W. Tong, B. Ning, Joshua Xu, 2021, Precision cancer medicine.

Plasma Carotenoids and Prostate Cancer: A Population-Based Case-Control Study in Arkansas

B. Ning, F. Kadlubar, Jianjun Zhang, 2006, Nutrition and cancer.

Use of Liver-Derived Cell Lines for the Study of Drug-Induced Liver Injury

Lei Guo, B. Ning, Si Chen, 2018 .

Identification of translational microRNA biomarker candidates for ketoconazole-induced liver injury using next-generation sequencing.

W. Tong, Lei Guo, B. Ning, 2020, Toxicological sciences : an official journal of the Society of Toxicology.

Multiple microRNAs function as self-protective modules in acetaminophen-induced hepatotoxicity in humans

W. Xiao, Tieliu Shi, Leming Shi, 2018, Archives of Toxicology.

Gene Expression Variability in Human Hepatic Drug Metabolizing Enzymes and Transporters

Leming Shi, Jim Kaput, Baitang Ning, 2013, PloS one.

A systematic evaluation of microRNAs in regulating human hepatic CYP2E1

W. Tong, Lei Guo, B. Ning, 2017, Biochemical pharmacology.

Significant variations in alternative splicing patterns and expression profiles between human-mouse orthologs in early embryos

Weida Tong, Leming Shi, Yongxiang Zhao, 2017, Science China Life Sciences.

Erratum to: Studies on abacavir-induced hypersensitivity reaction: a successful example of translation of pharmacogenetics to personalized medicine

James Fuscoe, HuiXiao Hong, ZhenQiang Su, 2013, Science China Life Sciences.

Re-annotation of presumed noncoding disease/trait-associated genetic variants by integrative analyses

Tieliu Shi, B. Ning, Dianke Yu, 2015, Scientific Reports.

The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data

Lei Guo, Zhenqiang Su, Zhining Wen, 2011, Handbook of Statistical Bioinformatics.

Mitochondrial dysfunction and apoptosis underlie the hepatotoxicity of perhexiline.

Lei Guo, B. Ning, Xiaoqing Guo, 2020, Toxicology in vitro : an international journal published in association with BIBRA.

Suppression of CYP2C9 by MicroRNA hsa-miR-128-3p in Human Liver Cells and Association with Hepatocellular Carcinoma

J. Fuscoe, B. Ning, I. Pogribny, 2015, Scientific Reports.

Sulfation of fulvestrant by human liver cytosols and recombinant SULT1A1 and SULT1E1

B. Ning, C. Falany, Susan A Kadlubar, 2011, Pharmacogenomics and personalized medicine.

sulfation of fulvestrant by human liver cytosols and recombinant sULT 1 A 1 and sULT 1 E 1

B. Ning, C. Falany, Susan A Kadlubar, 2011 .

Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing

Thomas M. Blomquist, Daoud M. Meerzaman, S. Sherry, 2021, Nature Biotechnology.

A functional SNP in the 3′‐UTR of TAP2 gene interacts with microRNA hsa‐miR‐1270 to suppress the gene expression

Tieliu Shi, B. Ning, J. Xuan, 2018, Environmental and molecular mutagenesis.

QuaPra: Efficient transcript assembly and quantification using quadratic programming with Apriori algorithm

Pawel P. Labaj, David P. Kreil, C. Mason, 2019, Science China Life Sciences.

QuaPra: Efficient transcript assembly and quantification using quadratic programming with Apriori algorithm

Weida Tong, Christopher E. Mason, Pawel P. Labaj, 2019, Science China Life Sciences.

Biochemical features and mutations of key proteins in SARS-CoV-2 and their impacts on RNA therapeutics

Tieliu Shi, W. Tong, B. Ning, 2021, Biochemical Pharmacology.

Cystine-Glutamate Transporter SLC7A11 Mediates Resistance to Geldanamycin but Not to 17-(Allylamino)-17-demethoxygeldanamycin

Paul E. Blower, Ying Huang, Baitang Ning, 2007, Molecular Pharmacology.

Studies on abacavir-induced hypersensitivity reaction: a successful example of translation of pharmacogenetics to personalized medicine

Leming Shi, J. Fuscoe, H. Hong, 2013, Science China Life Sciences.

The expression, induction and pharmacological activity of CYP1A2 are post‐transcriptionally regulated by microRNA hsa‐miR‐132–5p

W. Tong, Lei Guo, N. Mei, 2017, Biochemical pharmacology.

MicroRNAs hsa-miR-495-3p and hsa-miR-486-5p Suppress Basal and Rifampicin-induced Expression of Human Sulfotransferase 2A1 (SULT2A1) by Facilitating mRNA Degradation.

W. Tong, Lei Guo, B. Ning, 2019, Biochemical pharmacology.

Modulation of ALDH5A1 and SLC22A7 by microRNA hsa-miR-29a-3p in human liver cells.

Lei Guo, B. Ning, Dianke Yu, 2015, Biochemical pharmacology.

GSTM1 copy number and promoter haplotype as predictors for risk of recurrence and/or second primary tumor in patients with head and neck cancer

B. Ning, Xifeng Wu, Jie Lin, 2013, Pharmacogenomics and personalized medicine.

GSTM 1 copy number and promoter haplotype as predictors for risk of recurrence and / or second primary tumor in patients with head and neck cancer

B. Ning, Xifeng Wu, Jie Lin, 2013 .

Methylation potential associated with diet, genotype, protein, and metabolite levels in the Delta Obesity Vitamin Study

Melissa J. Morine, B. Ning, C. Priami, 2014, Genes & Nutrition.

Study of pharmacogenomic information in FDA-approved drug labeling to facilitate application of precision medicine.

Stephen C. Harris, W. Tong, H. Fang, 2020, Drug discovery today.

Activation of the Nrf2 signaling pathway in usnic acid-induced toxicity in HepG2 cells

Leming Shi, Lei Guo, N. Mei, 2017, Archives of Toxicology.

Critical role of bioinformatics in translating huge amounts of next-generation sequencing data into personalized medicine

Leming Shi, W. Tong, H. Hong, 2013, Science China Life Sciences.

Functional single nucleotide polymorphism in IL−17A 3′ untranslated region is targeted by miR‐4480 in vitro and may be associated with age‐related macular degeneration

Nicholas A. Popp, B. Ning, E. Chew, 2016, Environmental and molecular mutagenesis.

HLADR: a database system for enhancing the discovery of biomarkers for predicting human leukocyte antigen-mediated idiosyncratic adverse drug reactions.

Leming Shi, Qinghe Xing, Heng Luo, 2015, Biomarkers in medicine.

Identification of Functional Genetic Variants in and Their Association With Risk of Esophageal Cancer

B. Ning, W. Tan, X. Miao, 2005 .

P53-M Real-Time PCR Array for Multi-Gene Expression Profiling and Microarray Data Validation: RT2 Profiler PCR Array.

Y. Dragan, Lei Guo, B. Ning, 2007 .

Two new ArrayTrack libraries for personalized biomedical research

Weida Tong, Huixiao Hong, Hong Fang, 2010, BMC Bioinformatics.

Identification of functional genetic variants in cyclooxygenase-2 and their association with risk of esophageal cancer.

B. Ning, W. Tan, D. Lin, 2005, Gastroenterology.

Impact of Sequencing Depth and Library Preparation on Toxicological Interpretation of RNA-Seq Data in a "Three-Sample" Scenario.

W. Tong, B. Ning, Joshua Xu, 2020, Chemical research in toxicology.

Leming Shi, Lei Guo, B. Ning, 2011, Drug Metabolism and Disposition.

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Todd H. Stokes, Kevin C. Dorff, Aaron M. Smalter, 2010, Nature Biotechnology.

Studies on abacavir-induced hypersensitivity reaction: a successful example of translation of pharmacogenetics to personalized medicine

Leming Shi, J. Fuscoe, H. Hong, 2013, Science China Life Sciences.

Development of HepG2-derived cells expressing cytochrome P450s for assessing metabolism-associated drug-induced liver toxicity.

Lei Guo, B. Ning, J. Xuan, 2016, Chemico-biological interactions.

Long noncoding RNA LINC00844-mediated molecular network regulates expression of drug metabolizing enzymes and nuclear receptors in human liver cells

W. Tong, Lei Guo, B. Ning, 2020, Archives of Toxicology.

The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data

Z. Wen, Leming Shi, W. Tong, 2011, Handbook of Statistical Bioinformatics.

X-CNV: genome-wide prediction of the pathogenicity of copy number variations

Tieliu Shi, W. Tong, B. Ning, 2021, Genome Medicine.

The Needs and Challenges in Assessing Genetic Variants for Drug Efficacy and Safety

B. Ning, Ching-Wei Chang, 2012 .